| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,809,774 | (T)7→8 | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 96.9% | 336.8 / 3.1 | 99 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base T (48/47); total (50/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTC > NC_000913/2809668‑2809865 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg < 2:239165/100‑1 (MQ=255)ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg < 2:2818218/100‑1 (MQ=255)ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg > 1:2412630/1‑100 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCAGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t > 1:1801022/1‑100 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttt > 1:1275006/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt > 1:1849224/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt > 1:250095/1‑100 (MQ=255) aaaGACGGTTTACCGATTGTTATTAGTTATATTCTGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt‑t < 1:1494843/100‑1 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt‑t < 2:2063313/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt‑tt > 1:2411442/1‑100 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTTGGATTCTCTCCTCTCGACAGCG‑‑ttttt‑tttc < 2:1904646/100‑3 (MQ=255) aGTTTACCGATTGTTATTAGTTATATCCCGGTGGCCTTTGCGTTCGGTATGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑ttttt‑tttctcc < 1:1688592/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCt > 1:734697/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTg < 1:2154194/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTg < 1:553421/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTg < 1:1992764/100‑1 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGc < 2:267382/100‑1 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcat > 1:2154548/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcat > 2:1274831/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcatc > 2:260185/1‑100 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcatca < 2:1062016/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcatcat < 1:1834478/100‑1 (MQ=255) gATTGTTATTAGTAATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTGTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGcat > 1:1749844/1‑97 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTa < 2:140115/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCTTCATTTATg > 1:413532/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATg < 1:135323/99‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTTT‑TTCTCCTGCATCATTTATGCa > 1:2288224/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCa > 1:1955383/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCa < 1:1753812/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAgg < 2:1451205/100‑1 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGgcg < 1:116533/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGcgcg > 1:1643624/1‑100 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGcgcg > 2:1621737/1‑100 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGC‑TTTTT‑TTCTTCTGCATCATTTATGCTGgcgc > 1:655115/1‑97 (MQ=255) tCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCa < 1:2129838/100‑1 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAg > 2:502841/1‑100 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:178077/100‑1 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCga > 2:178079/1‑99 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 2:2298026/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 2:1747992/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 1:2744884/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:164514/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:729299/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:1205909/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:35036/100‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 2:2203496/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt < 2:2642112/100‑1 (MQ=255) ctcttccgatCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTTTCTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc < 1:2120104/91‑1 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTTTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg < 1:2433244/100‑1 (MQ=255) cGTTCGGACTGGATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 1:1483247/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:361044/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 2:1534598/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:2445117/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:2446505/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 1:1045492/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 2:2227599/1‑100 (MQ=255) ntGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 1:1066529/2‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 1:2659755/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 1:1883335/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:732696/100‑1 (MQ=255) gAATGTGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:2701476/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgag > 2:1883349/1‑98 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:1068046/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:617752/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:2661772/1‑100 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 1:1915166/1‑100 (MQ=255) acGACCCGTCTGGGATTCCCTCCTCGCGAAAGCGT‑TTTTT‑TTCTCCTGCTTCATTTATGCAGGCGCGAGACAGTTCGTCATTACcgc > 1:685562/2‑87 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGAGCGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 1:1397318/1‑99 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2234366/100‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 1:2091017/1‑100 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 1:729293/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGCGTTTTTTT‑TTCTCTTCCTTCTTTTTTCCAGCCGCGACCAGGTTCGTCATTACCGCGTTGCTGGCGGCggg > 1:1520034/1‑94 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt > 2:2585422/1‑100 (MQ=255) gggATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 1:1160454/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCTGCCGGGAGTAGTTtgt > 1:712476/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:579145/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:540109/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 2:574626/1‑100 (MQ=255) ctctcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGCAGTTTGTGGAt > 2:1030886/1‑100 (MQ=255) ctctcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTCCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 1:1987965/1‑100 (MQ=255) tctcctctcGAAAGCGT‑TTTTT‑TTCTTTTTTATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt > 1:1129321/1‑100 (MQ=255) ctcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg > 2:868120/1‑100 (MQ=255) ctcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg < 2:1643636/100‑1 (MQ=255) tcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgn < 2:1066537/100‑2 (MQ=255) tcctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:2154563/100‑1 (MQ=255) cctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 2:2739362/1‑100 (MQ=255) cctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 2:1681893/1‑100 (MQ=255) cctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCACGAGCCAGTTCGTCATTACCACGATGCTGGCAGCTGGGATTAGTTTGTGGATttct > 1:781301/1‑100 (MQ=255) ctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 2:140045/1‑100 (MQ=255) ctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:734703/100‑1 (MQ=255) ctctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:179000/100‑1 (MQ=255) ctcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 1:1563859/1‑100 (MQ=255) tcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:236175/100‑1 (MQ=255) tcGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc > 2:1217844/1‑100 (MQ=255) ctgAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:311743/98‑1 (MQ=255) cGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 1:743776/1‑100 (MQ=255) cGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt < 1:1898005/100‑1 (MQ=255) cGAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 1:1591901/1‑100 (MQ=255) gAAAGCGT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAcag > 1:311739/1‑98 (MQ=255) cG‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCAATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTc < 2:558055/100‑1 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTC > NC_000913/2809668‑2809865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |