Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,946,025 (A)7→6 100% intergenic (‑49/+90) ruvA ← / ← yobI component of RuvABC resolvasome, regulatory subunit/uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,946,0190A.98.7% 347.4 / ‑2.9 77intergenic (‑43/+96)ruvA/yobIcomponent of RuvABC resolvasome, regulatory subunit/uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base . (40/36);  total (40/37)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTACAGG  >  NC_000913/1945921‑1946114
                                                                                                  |                                                                                               
aTTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaa                                                                                                >  1:393861/1‑100 (MQ=255)
aTTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaa                                                                                                >  1:1776272/1‑100 (MQ=255)
aTTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaa                                                                                                >  2:1691699/1‑100 (MQ=255)
aTTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAACGCTGTATGATaa                                                                                                >  2:247281/1‑100 (MQ=255)
 ttAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaa                                                                                               >  2:1843585/1‑100 (MQ=255)
  tAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaa                                                                                              <  1:1913341/100‑1 (MQ=255)
   aaCACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaa                                                                                             >  2:708588/1‑100 (MQ=255)
     cacCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACCCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaat                                                                                           >  2:1527315/1‑99 (MQ=255)
       ccAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaatgc                                                                                         >  1:812160/1‑97 (MQ=255)
       ccAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaatgc                                                                                         <  1:2388702/100‑4 (MQ=255)
       ccAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaatgc                                                                                         >  1:1438177/1‑97 (MQ=255)
       ccAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaatgc                                                                                         >  1:170269/1‑97 (MQ=255)
        cAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATaaaaaatgct                                                                                        <  1:2080860/100‑5 (MQ=255)
         aGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTg                                                                                      <  1:1712530/100‑1 (MQ=255)
         aGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTg                                                                                      <  2:384377/100‑1 (MQ=255)
          tcagtgtctgttTTTCAAGTATGTTGCCTCTAAATATGCCTATCACATTGCGATCCTACGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTgg                                                                                     <  2:2303195/92‑1 (MQ=255)
          gCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTgg                                                                                     >  2:1581059/1‑100 (MQ=255)
           cGGTGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTg                                                                                      <  2:1467056/98‑1 (MQ=255)
              gggTTGTTTTTCAATGAAGATGCCTCTGAGTCCGCCTATCACATGACGCTCCTGCGTAATGAATAAAAGATAATGCTGTAGGAT‑AAAAAATGGTGgatag                                                                                 >  1:2248109/1‑100 (MQ=255)
               ggTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGgataga                                                                                >  2:2156104/1‑100 (MQ=255)
                gttgttTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGgatagat                                                                               >  1:1204513/1‑100 (MQ=255)
                gttgttTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGgatagat                                                                               >  1:365455/1‑100 (MQ=255)
                  tgttTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGatat                                                                             >  1:884058/1‑100 (MQ=255)
                   gttTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATc                                                                            >  2:1942571/1‑100 (MQ=255)
                   gttTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATc                                                                            >  1:961088/1‑100 (MQ=255)
                     ttttCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCa                                                                          >  1:618924/1‑100 (MQ=255)
                      tttCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCa                                                                          <  1:93117/99‑1 (MQ=255)
                      tttCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAg                                                                         <  2:610952/100‑1 (MQ=255)
                      tttCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAg                                                                         >  2:1639127/1‑100 (MQ=255)
                       ttCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCATGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAg                                                                         <  2:957407/99‑1 (MQ=255)
                         cAATGCTGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATATCTATCCAGcat                                                                      <  2:203855/100‑3 (MQ=255)
                         cAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGa                                                                      >  2:1131397/1‑100 (MQ=255)
                           atgatgatgCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AATAAATGCTGGATAGATATCCAGCGAAg                                                                    <  1:1453628/100‑1 (MQ=255)
                           atgatgatgCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATATCTATCCAGcatt                                                                     <  2:849977/99‑4 (MQ=255)
                               tgatgCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATg                                                                >  2:688070/1‑100 (MQ=255)
                                gatgCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTACTGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGCAGGAt                                                                 >  2:1984415/1‑98 (MQ=255)
                                 atgCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATATCTATCCAGcattttttatc                                                              <  2:2272588/100‑11 (MQ=255)
                                   gCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATgaaga                                                            <  1:72662/100‑1 (MQ=255)
                                   gCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATgaaga                                                            >  1:1409282/1‑100 (MQ=255)
                                     ctctGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGaaa                                                          >  2:616450/1‑100 (MQ=255)
                                       ctGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAAc                                                        <  1:1659050/100‑1 (MQ=255)
                                         gAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACtt                                                      >  1:104549/1‑100 (MQ=255)
                                         gAGTCTGCCTATCACATGACGCTACTGCGTAATGAATCAAATAGAATGAAATAAGA‑AAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAAc                                                        <  2:2075662/98‑1 (MQ=255)
                                            tttGCCTATCACATGACGCTTCTGCGTAATGAATCACAGATAATGCTGTATGAT‑AAACAATGCTGGATAGCTTTCCAGCGATGGATGAAGAAAACTTGCg                                                   <  2:278355/98‑1 (MQ=255)
                                            tCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAGAACTTGCg                                                   <  2:497029/100‑1 (MQ=255)
                                            tCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAGAACTTGCg                                                   <  2:496370/100‑1 (MQ=255)
                                            tCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCg                                                   <  2:1921723/100‑1 (MQ=255)
                                             cTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGa                                                  >  2:560671/1‑100 (MQ=255)
                                               nccTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATACAGCGAAGGATGAAGAAAACTTGCGAg                                                 >  2:2350490/2‑99 (MQ=255)
                                               gCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                >  2:2288806/1‑100 (MQ=255)
                                               gCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                <  2:12863/100‑1 (MQ=255)
                                               gCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                >  1:1780985/1‑100 (MQ=255)
                                               gCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                >  1:1684505/1‑100 (MQ=255)
                                               gCCTATCACATGAAGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAg                                                 >  2:1472832/1‑99 (MQ=255)
                                               ccgatctacaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                <  2:594401/93‑1 (MQ=255)
                                               ccgatctacaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAgg                                                <  2:594258/93‑1 (MQ=255)
                                                 cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg                                              >  1:729197/1‑100 (MQ=255)
                                                 cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg                                              <  1:560673/100‑1 (MQ=255)
                                                 cTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtg                                              <  2:334656/100‑1 (MQ=255)
                                                  tATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtgt                                             >  1:375226/1‑100 (MQ=255)
                                                  tATCACATGACGATCTTGCGTAATGAATCAAAGAGAATGCTGTATAAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGgtt                                              <  2:1051639/99‑2 (MQ=255)
                                                   aTCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtc                                            >  1:1340249/1‑100 (MQ=255)
                                                   aTCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtc                                            >  2:1530499/1‑100 (MQ=255)
                                                     cacaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGtctc                                          >  1:1362087/1‑100 (MQ=255)
                                                      acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAggagatcgg                                         >  1:594260/1‑93 (MQ=255)
                                                      acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAggagatcgg                                         >  1:594403/1‑93 (MQ=255)
                                                      acaTGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCg                                         <  2:1776258/100‑1 (MQ=255)
                                                       caTGACGCTCCTGCGTGATGAATCAAAGATAATGCTGTATGAT‑AAACAACGATGGATCGATATCCAGCGAAGGATGAAGAAACCTTGCGAGGTGTCTCGa                                        <  2:1388803/100‑1 (MQ=255)
                                                          gACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGa                                     <  1:1415967/100‑1 (MQ=255)
                                                            cGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAAc                                   <  2:1976342/100‑1 (MQ=255)
                                                             gcaccTGCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACt                                  <  2:1550834/97‑1 (MQ=255)
                                                               tacTGCGTAATGAACAAAAGAGAATGCTATAAGAT‑AAAAAATGCTAGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGa                                <  2:686442/98‑1 (MQ=255)
                                                                   gCGTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGaaaaa                            >  2:912019/1‑100 (MQ=255)
                                                                     gTAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATg                          >  2:2129349/1‑100 (MQ=255)
                                                                      tAATGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATgg                         <  1:1340005/100‑1 (MQ=255)
                                                                       aatcaatcAAAGATACTACTGTATGAT‑AATAAATGCTGGATAGATATACAGCGACGGAACAAGAAACCCTGCGAGGTGTCTCGCTGACCTGAAAAATGGc                        <  2:1772067/100‑1 (MQ=255)
                                                                       aaTGAATCAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGc                        >  1:454866/1‑100 (MQ=255)
                                                                              cAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGtat                 >  1:1505638/1‑100 (MQ=255)
                                                                              cAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGtat                 >  2:1966250/1‑100 (MQ=255)
                                                                              cAAAGATAATGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGtat                 >  1:2204290/1‑100 (MQ=255)
                                                                                   aTAATGCTGATTGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGACTCGATAAACTAAAAAATGGCACAGTATAAttt            <  2:1571378/100‑1 (MQ=255)
                                                                                     aaTGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTAt          <  1:2152531/100‑1 (MQ=255)
                                                                                      aTGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTAtt         <  1:556220/100‑1 (MQ=255)
                                                                                       tGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTTGATGAACTGAAAAATGGCACAGTATAATTTATTc        >  1:333012/1‑100 (MQ=255)
                                                                                       tGCTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTAtt         >  1:1500311/1‑99 (MQ=255)
                                                                                         cTGTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTa      >  2:975300/1‑100 (MQ=255)
                                                                                           gTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTACa    >  2:1290048/1‑100 (MQ=255)
                                                                                           gTATGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTACa    >  1:359317/1‑100 (MQ=255)
                                                                                             aTGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTACAgg  <  1:1014609/100‑1 (MQ=255)
                                                                                             aTGAT‑AAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTATCGATGAACTTAAAAATGGCACAGTATACTTTATTCTACatg  <  1:1609822/100‑3 (MQ=255)
                                                                                                  |                                                                                               
ATTAACACCAGCGGGGGTTGTTTTTCAATGATGATGCCTCTGAGTCTGCCTATCACATGACGCTCCTGCGTAATGAATCAAAGATAATGCTGTATGATAAAAAAATGCTGGATAGATATCCAGCGAAGGATGAAGAAAACTTGCGAGGTGTCTCGATGAACTGAAAAATGGCACAGTATAATTTATTCTACAGG  >  NC_000913/1945921‑1946114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑