| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,247,837 | Δ1 bp | 15.5% | coding (65/663 nt) | yqjA → | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,247,836 | 0 | C | . | 15.5% | 313.9 / 59.2 | 110 | coding (64/663 nt) | yqjA | general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter |
| Reads supporting (aligned to +/- strand): ref base C (51/40); new base . (10/7); total (62/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.75e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CAGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGG > NC_000913/3247738‑3247935 | cAGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATcc < 2:1238653/100‑1 (MQ=255)cAGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATcc > 1:353692/1‑100 (MQ=255)cAGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATcc < 2:292644/100‑1 (MQ=255) aGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCa > 2:2157245/1‑100 (MQ=255) gCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCgat‑g > 1:1249270/1‑100 (MQ=255) cGTTAACCGAGTCACCAGGAATAATGAATGGAACTTTTGACCCGATTGCGACAAGCCCTGTGGGCGGAGGATTCTGAAACCCTGGCCAAACCTTCgat‑g < 2:520889/99‑1 (MQ=255) tAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTg > 1:1417955/1‑100 (MQ=255) aCCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGc < 1:1414715/100‑1 (MQ=255) ccGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCa > 1:1975884/1‑100 (MQ=255) ccGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGcc < 2:141231/100‑2 (MQ=255) ccGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGcc < 1:889891/100‑2 (MQ=255) ccGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACACTGGCCAATCCATCGAT‑GATTGGCa > 2:1747166/1‑100 (MQ=255) gATTCACCAGGAATAATTAATGGAACTTGTGTCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTCGCCAAT‑CATCGATGGATTGGccag < 2:553843/100‑4 (MQ=255) gATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGccag < 1:1418534/100‑4 (MQ=255) gATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGccag < 1:1574649/100‑4 (MQ=255) aTTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCAtgt > 1:493742/1‑100 (MQ=255) aTTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGccagg < 2:5522/100‑5 (MQ=255) ttCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCa < 1:1031881/96‑1 (MQ=255) ttCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAT‑CATCGATGGATTGGccaggg < 2:831962/100‑6 (MQ=38) ctCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCAtgtt < 2:451627/99‑1 (MQ=255) cACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCAtgttgt > 1:752709/1‑100 (MQ=255) cACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCAtgttgt > 1:632308/1‑100 (MQ=255) aCCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTa > 1:907115/1‑100 (MQ=255) aCCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTa < 2:2115541/100‑1 (MQ=255) aCCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCACTGTGGGCGCAGGATTTTGAAACCCTGGCCACGCCATCGAT‑GATTGGCATGATGTa > 2:105485/1‑100 (MQ=255) cAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAtt > 1:1008683/1‑100 (MQ=255) aGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAttt < 1:716456/100‑1 (MQ=255) aGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAttt > 1:496779/1‑100 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAtttt > 2:711305/1‑100 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAtttt < 1:177596/100‑1 (MQ=255) ggAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTAtttt > 1:720818/1‑100 (MQ=255) aataatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGt < 1:1770011/100‑1 (MQ=255) ataatGAATGGAACTTGGAACCCAAGTGCTGCAAGCAGTGCGGGCGCAGGATTTGGAAACCCTGGCCAATACATCGAT‑GATTGGCAGGTGGAATTTCGt < 2:835316/99‑1 (MQ=255) taatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCt < 2:2078985/100‑1 (MQ=255) taatGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAAGCCATCGAT‑GATTGGCATGTTGTATTTTGTCt < 2:1350854/100‑1 (MQ=255) aatgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCtt > 1:296323/1‑100 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCACTCCATCGAT‑GATTGGCATGTTGTATTTTGTCttg > 2:1873258/1‑100 (MQ=255) atgaatgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttg < 1:2274519/100‑1 (MQ=255) gaatgGAACGTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttgtt < 1:1387765/100‑1 (MQ=255) atgGAACTTTTTACCCAATTGCTGCAAGCTCTGGCGGCGCAGGATTTTGAAAGCTTGGCCAAACCATCGAT‑AATTGGCATGTTGTATTTTGTCttgtttg < 2:850540/100‑1 (MQ=255) atgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttgtttg < 1:581254/100‑1 (MQ=255) atgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttgtttg > 2:2008941/1‑100 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttgtttgt > 2:1221688/1‑100 (MQ=255) tgGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCttgtttgt < 1:1688174/100‑1 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCATGATTTTGAAACCATGGCCAATACGTCGAT‑GATTGGCATGTTGTAGTTTGTCTAGTTTGTa > 2:1230624/1‑99 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTaa > 1:1536468/1‑100 (MQ=255) gAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTaa > 1:705431/1‑100 (MQ=255) cTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAAttt > 1:418092/1‑100 (MQ=255) tttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTg < 2:375993/100‑1 (MQ=255) aCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc < 2:2388497/100‑1 (MQ=255) aCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc > 1:904965/1‑100 (MQ=255) cccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt < 1:731788/100‑1 (MQ=255) cAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg > 2:274131/1‑100 (MQ=255) cAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg > 1:1040238/1‑100 (MQ=255) ttGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 2:841862/99‑1 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACgg > 1:1476729/1‑100 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACgg < 1:677545/100‑1 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACgg < 1:1794760/100‑1 (MQ=255) tgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACg > 2:1246327/1‑99 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc < 1:324280/100‑1 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc > 1:451211/1‑100 (MQ=255) aaGCCCTGTGGGGGCAGGATTTTGAAACCCTGGCCATTCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc < 2:1049277/98‑1 (MQ=255) aaGCCCTGTGGGCTCAGGATTTTGAAACCCTGTCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGACTTGTTTGTAATTGTGTTCCTTGAAAACGgctt < 2:118203/100‑1 (MQ=255) aaGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctt < 1:1876595/100‑1 (MQ=255) aaGCCCTGCGGGCGCAGGATATTGAAACCCTGGCCAACCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc > 2:539534/1‑98 (MQ=255) aGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttg < 2:1778642/100‑1 (MQ=255) gggCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggc < 1:627490/100‑1 (MQ=255) gcgcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg > 1:1807353/1‑100 (MQ=255) gcgcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg > 1:396046/1‑100 (MQ=255) ctcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCggcggc < 2:1441946/98‑1 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAACACGGCTTGCTTCCggcggc > 1:1390260/1‑100 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCggcggc > 2:220446/1‑100 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTGGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg > 2:2024538/1‑99 (MQ=255) gcAGGATTTTGAAACCCTTGCCAATCAATCGAT‑GATTGGCATGTTGTATTTTGCCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg < 1:1957662/98‑1 (MQ=255) gcAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGcc < 2:728978/100‑1 (MQ=255) ggATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttt < 2:2299776/100‑1 (MQ=255) ggATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttt > 1:2047280/1‑100 (MQ=255) ggATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttt < 1:1000536/100‑1 (MQ=255) aTTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttttt > 2:1395347/1‑100 (MQ=255) gtttGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTGGTATTTTGTCTTGTTTGTCATCTTGTTCGTTGATTACGGCTTGCTTCCGGCGGCCttttt > 2:1672895/2‑99 (MQ=255) tttGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc > 1:241194/1‑100 (MQ=255) tttGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc > 1:2264623/1‑100 (MQ=255) ttGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAcc > 1:699586/1‑100 (MQ=255) ttGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAcc > 2:2302968/1‑100 (MQ=255) aaCCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGc > 1:1634476/1‑100 (MQ=255) naacatgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCg > 2:1725070/7‑100 (MQ=38) caacatgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCg > 1:1582691/7‑100 (MQ=38) cccTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCg > 1:914402/1‑99 (MQ=255) ccTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 2:2322399/1‑100 (MQ=255) acatgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTTATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTTCCg > 2:1300183/5‑94 (MQ=37) acatgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 1:1244569/5‑100 (MQ=255) catgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGCGCGACa > 1:1633347/4‑100 (MQ=255) atgCCAAT‑CATCGGTGGATTGGCATGTTGTATTTTGTCTTGTTTGTAGTTTTGTTCCTTGGAAACGGTTTGATTCAGGAGGCCTTTTTACCGGGCGaa > 2:1903500/3‑97 (MQ=255) atgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAg > 1:619144/3‑100 (MQ=255) atgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCAGGCGGCCTTTTTACCGGGCGACAg > 2:1480370/3‑100 (MQ=255) tgCCAAT‑CATCGATGGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGt > 1:1795443/2‑100 (MQ=255) gCCAATCCATCGAT‑GATTGGCGTGTTGTATTGTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGtt < 2:1061255/100‑1 (MQ=255) aTCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACt < 2:2047262/100‑1 (MQ=255) ccATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTgg > 1:1241349/1‑100 (MQ=255) ccATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTgg < 1:1495382/100‑1 (MQ=255) | CAGCGTGGCGTTAACCGATTCACCAGGAATAATGAATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGAT‑GATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGG > NC_000913/3247738‑3247935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |