| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 96.7% | 313.6 / 3.7 | 90 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (44/43); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 | aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c < 1:2335064/100‑1 (MQ=255)aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c < 2:900820/100‑1 (MQ=255)aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c < 1:776788/100‑1 (MQ=255) tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c < 1:975684/100‑1 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cc < 2:915545/100‑1 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑ccc > 2:933875/1‑100 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccc < 1:173091/100‑2 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgc > 1:272771/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgc > 1:1140331/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgcg > 1:1667669/1‑95 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTg < 2:2365330/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGc < 2:978995/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGc < 1:1810176/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCa < 2:1631620/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCa < 2:1326668/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACATCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAg < 1:505262/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTCTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAg > 2:1269253/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGa > 2:1046866/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGa > 2:2132334/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAt > 2:866560/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAt > 2:2106886/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAt < 2:1425746/100‑1 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 1:1772915/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 1:1897655/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 2:2305352/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcg > 1:1054783/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcg < 1:1877646/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACGCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGGTTGCAGGATTTcg > 1:595412/1‑100 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcgc < 2:1111033/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcgcg < 1:1834787/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAAc < 2:15206/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAAc > 2:1648041/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAAc > 2:1380056/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCGTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAAc > 2:141019/1‑100 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcg < 1:1046870/100‑1 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcg > 1:2077007/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCTGCGTTTGCAGGATTTTGCGCAAACGGCGCa < 1:1597011/100‑1 (MQ=255) tCGCTTGAGACTGGCCTTTCTGACAGATTCTTACTTACTCGCCGAACAGCGCTTCGATAGTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCa < 2:2357168/100‑1 (MQ=255) tCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCa < 1:1764586/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:241098/100‑1 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 2:136314/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTGACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt < 2:1927906/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt > 1:1174897/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:668854/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:159931/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 1:1535670/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:866562/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:1486620/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt < 1:1164477/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:2279731/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCTATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg > 2:2289505/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:2021153/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:1122570/100‑1 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt < 1:1378433/100‑1 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt > 1:10748/1‑100 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 1:707199/100‑1 (MQ=255) tCTGACAGATTTTTACTTACTCGCTGAACAGCCCTTCGATATTTAG‑CGCCCTGCGTTTGCAGGATTTCGCGCAACCGGCCCAGGCCTTCAACCTGAATCt < 2:2035092/100‑1 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 1:484796/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCACGATTTCACGCAAACGGCGCGGGCCTTCAACCTGAATCTg > 2:1676103/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGTAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:1678139/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg < 1:1261318/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:1564216/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:1878657/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:1809482/1‑100 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:1776577/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:1628130/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 2:780401/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 1:136315/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:580901/1‑100 (MQ=255) aTGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAaca < 1:423001/100‑1 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAAAGGCGCAGGCCTTCAACCTGAATCTGGCGAacac < 2:1426148/100‑1 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 1:2202490/100‑1 (MQ=255) gttacttacTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGAAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:2376287/2‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:2080373/1‑100 (MQ=255) ttacttacTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGtt > 2:634664/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 1:563554/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 1:1264823/100‑1 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 1:1465052/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 1:1335325/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:801868/99‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCTCAGGCCTTCAACCTGAATCTTGCGAACACGTTCACGGGTGa > 1:1901709/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:2234579/99‑1 (MQ=255) gcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg < 2:1975450/100‑1 (MQ=255) gcgcTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt < 1:1983832/100‑1 (MQ=255) gcgcTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:401870/1‑100 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1963242/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:2305373/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:1963226/1‑100 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:616983/1‑100 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:617162/1‑100 (MQ=255) tCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa < 1:1380064/100‑1 (MQ=255) cGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGTCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:681845/100‑1 (MQ=255) cGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:89775/100‑1 (MQ=255) gATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 1:1190380/100‑1 (MQ=255) gATATTCAG‑C‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTGACGGGGGAGGCCAATTTCACGAcc > 2:365185/1‑99 (MQ=255) tatTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 2:458317/1‑100 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 2:1416763/1‑99 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:1020999/100‑1 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:1538487/1‑100 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:2280870/100‑1 (MQ=255) | ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |