New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3619878 = | NA (NA) | 7 (0.090) | 4/160 | NT | 100% | coding (687/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3619892 = | 0 (0.000) | coding (701/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
TGCTGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATtcaccggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3619976‑3619878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAAC > NC_000913/3619892‑3619999 TGCTGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATT > 1:940654/1‑100 CTGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCA > 1:1869301/1‑100 CTGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATACGTCACGCCGGTGATTTC‑GCCGCTGAATTCA > 1:1869358/1‑100 TGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCAC < 1:740422/100‑1 TGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCAC > 1:1943209/1‑100 TGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCAC < 1:1947244/100‑1 GCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACC < 2:2147283/100‑1 GCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACC < 2:181084/100‑1 GCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACC < 1:383814/100‑1 GCCGGGCTTCTTCTGCCCGCGGCGCATGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACC < 2:595977/100‑1 CCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACCG > 1:136281/1‑100 CGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGAATTCAGCGGC‑GAAATCACCGG < 2:1353767/100‑1 CGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGAATTC‑AGCGGCGAAATCACCGG < 1:1758220/100‑1 CGGGCTTCTTCTGCCCGCTGCGCCTGCGTGATCGGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTAAATTCACCGG > 2:1567244/1‑100 GGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACCGGC > 2:1844496/1‑100 GGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACCGGC > 2:834926/1‑100 GGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATTCACCGGC > 1:1296088/1‑100 GGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAGTTCACCGGCG > 2:1572833/1‑100 GGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGAATTC‑AGCGGCGAAATCACCGGCG < 2:812708/100‑1 CACGCCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAA > 1:2159753/1‑99 ACGCCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGC > 1:418106/1‑100 CGCCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCC > 1:1737584/1‑100 GCCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACTACGCAGGCGCAGCGGGCAGAAGAAGCCC > 2:1932308/1‑100 CCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCG > 1:2219411/1‑100 CCGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCG > 2:219320/1‑100 CGGTGATTTC‑GCCGCTGAATTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGG > 2:1055379/1‑100 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGTTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGG < 1:2043498/100‑1 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGG < 1:1141984/100‑1 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGG < 2:816021/100‑1 TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGG < 1:2258763/100‑1 CACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGG < 1:737574/100‑1 CACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGG < 2:2004412/100‑1 CACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGG < 2:2075628/100‑1 CACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGG > 2:2168304/1‑100 CCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTCCTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGC < 2:2169671/95‑1 CCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGAC > 1:1757394/1‑100 CCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGAC > 1:2125557/1‑100 CGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACG > 1:2384872/1‑100 GGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGG > 2:1336646/1‑100 GGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGAC < 2:1512129/98‑1 GCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGA < 2:98655/100‑1 CGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAA < 1:921592/100‑1 CGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAA > 1:2125469/1‑100 GTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGCCGGAAC > 1:900201/1‑100 GTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAAC > 2:1066389/1‑100 TGCTGCCGGGCTTCTTCTGCCCGCTGCGCCTGCGTGGTCAGTACCAGCCGGAAGTGACGCCAGGCACCATCCGTCACGCCGGTGATTTC‑GCCGCTGAATtcaccggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3619976‑3619878 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAAC > NC_000913/3619892‑3619999 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |