| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2192996 = | 85 (0.990) | 14 (0.180) | 9/158 | NT | 15.2% | intergenic (‑200/+63) | yehE/mrp | DUF2574 family protein/antiporter inner membrane protein |
| ? | NC_000913 | 2193031 = | 81 (1.070) | intergenic (‑235/+28) | yehE/mrp | DUF2574 family protein/antiporter inner membrane protein | |||||
CAGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2193103‑2192996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggtgtatGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGGT > NC_000913/2193031‑2193129 CAGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATG < 2:1581425/100‑1 AGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATG < 2:2080716/99‑1 GGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGG < 1:2071839/100‑1 GGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGG < 1:2085379/100‑1 tcttccgatcTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGGT < 1:956987/90‑1 AGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTAT > 2:773526/1‑100 AGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTAT > 1:833610/1‑100 ATTCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGG > 1:883907/1‑100 TCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAA > 1:2319839/1‑100 TTCATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCG‑TAGACCGCGCGGAAGGAAATCTCGCCTGGAATGA > 1:707286/1‑100 CATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGAC > 2:722617/1‑100 ATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACT > 2:1951202/1‑100 ATACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAAGCTCGCCTGGAATGACT > 2:1138462/1‑100 TACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTT > 1:389011/1‑100 TACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTT > 1:612178/1‑100 TACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTT > 1:1483308/1‑100 TACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTT > 2:1803993/1‑100 TACACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTT > 2:1801473/1‑100 ACCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCAC > 1:159188/1‑100 CCGCAGAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACC > 2:299052/1‑100 GAGATGTTACATTGATGCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCC < 2:159187/100‑1 GCGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGC > 2:1855197/1‑100 CGGTGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCA < 2:1068530/100‑1 TGTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACG < 1:1341586/100‑1 GTATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGC < 1:358159/100‑1 ATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGG > 1:276244/1‑100 ATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGG < 1:531416/100‑1 ATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGG < 1:46234/100‑1 ATGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCG > 2:187935/1‑99 TGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGGT > 2:391495/1‑100 TGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCCGCAACGCGG > 2:1699420/1‑99 CAGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAACGCCTATTAACCATTCTGGTTATTCTTCATACACCGCAGAGATGTTACATTGATGCGGTGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2193103‑2192996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggtgtatGAAGAATAACCAGAATGGTTAATAGGCGTTAGACCGCGCGGAAGGAAATCTCGCCTGGAATGACTTCACCCTGCCAGTAGAGCTGAGCTGCAACGCGGT > NC_000913/2193031‑2193129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |