BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3277819 =	NA (NA)	4 (0.050)	4/162	NT	NA	noncoding (1/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3277844 =	NA (NA)	4 (0.050)	4/162	NT	NA	noncoding (26/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 109 total aligned reads displayed.

GTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277721‑3277918

gTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgc                                                                                                    <  1:644056/100‑1 (MQ=255)

 tATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgcc                                                                                                   <  1:1940255/100‑1 (MQ=255)

 tATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgcc                                                                                                   >  1:1486282/1‑100 (MQ=255)

   ttCAGCAAAATTTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGa                                                                                                 <  1:1417386/100‑1 (MQ=255)

    tCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGCGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGaa                                                                                                >  2:1905530/1‑100 (MQ=255)

     cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               >  2:1556764/1‑100 (MQ=255)

      aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  1:294525/100‑1 (MQ=255)

       gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                             >  1:2163389/1‑100 (MQ=255)

        cAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCa                                                                                            >  2:1535070/1‑100 (MQ=255)

          aaaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCAtt                                                                                          >  2:829375/1‑100 (MQ=255)

          aaaTGTGTAAAAGAGCGAAGCCTCCTGCCTACTGGGAAACCCTCACCCGAGAAACAGAAGAAAACCATTGATGGTGTGCACAATGCCCGCCGAACg                                                                                              <  2:1301412/96‑1 (MQ=255)

           aaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTc                                                                                         <  1:1901535/100‑1 (MQ=255)

              gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                      >  2:2083561/1‑100 (MQ=255)

              gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCACCGAACGCATTCgtg                                                                                      >  1:2349835/1‑100 (MQ=255)

               ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     >  1:1501733/1‑100 (MQ=255)

               ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     >  1:1501873/1‑100 (MQ=255)

                tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  2:1315470/1‑100 (MQ=255)

                tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCACTCgtg                                                                                      >  2:862237/1‑98 (MQ=255)

                tAAAAAGAGGACATCCTCCCGCCCACTGGGCAACCCTCACCCGAGACACAGACGAAACCCATTTATGGTGTTCACAATGCCCGCCGAACGCATACGTGtt                                                                                    >  2:1024902/1‑100 (MQ=255)

                 aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   >  1:1306518/1‑100 (MQ=255)

                 aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAACAAACCCCTTGACGGTGTCCACAACGCCCGCCGAACGCAtccctgct                                                                                    >  2:1299871/1‑92 (MQ=255)

                  aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGa                                                                                  <  2:442285/100‑1 (MQ=255)

                    aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcc                                                                                >  1:1176966/1‑100 (MQ=255)

                        ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGATAAACAGAAGAAAAAAAATAAAAGTATTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCg                                                                            <  2:1499609/100‑1 (MQ=255)

                         gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCgg                                                                           <  2:1529570/100‑1 (MQ=255)

                          aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCggg                                                                          <  1:1039241/100‑1 (MQ=255)

                           cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCgg                                                                           >  2:624588/1‑98 (MQ=255)

                           cATCCGCCTGCCGACTGGGAAACTCTCGCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                         <  2:1140117/100‑1 (MQ=255)

                            cgcctcctGCCGACTGCGACACCCTCACCCGCGAAACAGCAGCACGCCGTTGATGGTGTTCACACTGCCCGCCGAACGCATTCGCGCTGACCAGCGGGCa                                                                        <  2:1421251/98‑1 (MQ=255)

                              cctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCCTTGATTGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      <  2:1885350/100‑1 (MQ=255)

                              atagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      >  1:1169538‑M1/69‑100 (MQ=255)

                               ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATcc                                                                     >  1:1012185/1‑100 (MQ=255)

                                tcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCt                                                                    <  1:437263/100‑1 (MQ=255)

                                 gcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCtt                                                                   >  1:1086145‑M1/66‑100 (MQ=255)

                                   tGCCGACTAGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                 <  1:2324831/100‑1 (MQ=255)

                                    tggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                >  1:1354368‑M1/63‑100 (MQ=255)

                                    gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                <  2:2184766/100‑1 (MQ=255)

                                    gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                >  1:1559163/1‑100 (MQ=255)

                                     ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  2:57512/100‑1 (MQ=255)

                                      gaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaagaatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                              >  1:235434‑M1/61‑100 (MQ=255)

                                      cGACTGGGAAACCCTCACCCGAGAAACAGAAGACACCCACTGCTGGTGTTCACCATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                 <  2:1063314/97‑1 (MQ=255)

                                      cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                              >  1:2047385/1‑100 (MQ=255)

                                      cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                              >  1:1029351/1‑100 (MQ=255)

                                       gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                             <  1:224607/100‑1 (MQ=255)

                                       gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                             <  2:631598/100‑1 (MQ=255)

                                       gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGGGTTGACCAGCGGGCATCCTTACTCAc                                                             >  2:538774/1‑100 (MQ=255)

                                        aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                            <  1:1663615/100‑1 (MQ=255)

                                        aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                            <  1:2008121/100‑1 (MQ=255)

                                          tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                          <  1:785249/100‑1 (MQ=255)

                                          tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                          >  1:1891420/1‑100 (MQ=255)

                                            ggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcccc                                                        <  2:248013/100‑1 (MQ=255)

                                            ggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcccc                                                        <  1:1004221/100‑1 (MQ=255)

                                             gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                       <  1:1243958/100‑1 (MQ=255)

                                              aaaCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                       >  1:1973980/1‑99 (MQ=255)

                                                 cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                                   >  2:111336/1‑100 (MQ=255)

                                                 cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTCTTCCCAGTGCCCGCCGAACGCATTCGTGTTGCCCCCCGGGCATCCTTTCTCACTCCCCGACCa                                                   >  2:2230261/1‑100 (MQ=255)

                                                   cTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCata                                                 <  1:1608498/100‑3 (MQ=255)

                                                    tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                <  2:304720/100‑1 (MQ=255)

                                                    tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                <  2:893865/100‑1 (MQ=255)

                                                     cACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAAt                                               <  2:2117387/100‑1 (MQ=255)

                                                     cACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAAt                                               >  2:1094504/1‑100 (MQ=255)

                                                      aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                              >  2:178822/1‑100 (MQ=255)

                                                       cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  2:415331/1‑100 (MQ=255)

                                                       cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             <  1:1905546/100‑1 (MQ=255)

                                                         cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                           <  2:837911/100‑1 (MQ=255)

                                                         cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                           >  2:2198183/1‑100 (MQ=255)

                                                           agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTc                                         >  1:1342854/1‑100 (MQ=255)

                                                            gacaCAGAAGATCCCCTTTGGTGGTAGTCACTATGCCCGCCGAACGCATTCGTGTAGAGCAGCGGGCATCCTTTCTCACTCCCCCACCAGAATCACTTCa                                        <  2:1513083/97‑1 (MQ=255)

                                                             aaaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCaa                                       <  1:578214/100‑1 (MQ=255)

                                                              aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      >  2:2383145/1‑100 (MQ=255)

                                                              aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      >  2:2018952/1‑100 (MQ=255)

                                                               aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                     >  2:674108/1‑100 (MQ=255)

                                                                 agaagaAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                                   >  2:674005/1‑100 (MQ=255)

                                                                  gaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                  >  1:1679301/1‑100 (MQ=255)

                                                                   aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 <  1:1205526/100‑1 (MQ=255)

                                                                       aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCtt                             >  1:2207621/1‑100 (MQ=255)

                                                                        aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                            >  2:690633/1‑100 (MQ=255)

                                                                         cccATTGATGGTGTTCACAATGCCCGCCGAACGCCTTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCTGACCCGAATCCCTTCAACCCCAGCCTTTc                           >  2:862559/1‑100 (MQ=255)

                                                                         cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                           >  1:1482819/1‑100 (MQ=255)

                                                                         cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                           <  1:2363895/100‑1 (MQ=255)

                                                                           cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  2:231465/100‑1 (MQ=255)

                                                                           cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         >  2:294124/1‑100 (MQ=255)

                                                                           cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  1:179744/100‑1 (MQ=255)

                                                                             ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       <  1:1556775/100‑1 (MQ=255)

                                                                               gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     >  1:957519/1‑100 (MQ=255)

                                                                               gATGGTCTTCACAATGCCCGCCGACCGCATTCGTGTTGACCAGCGTGCACCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                      <  2:2229276/99‑1 (MQ=255)

                                                                                  ggTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCtt                  <  2:1084505/100‑1 (MQ=255)

                                                                                   gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTc                 >  1:206574/1‑100 (MQ=255)

                                                                                   gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTc                 >  2:2057681/1‑100 (MQ=255)

                                                                                    tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                <  2:48680/100‑1 (MQ=255)

                                                                                     gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCa               >  2:1367182/1‑100 (MQ=255)

                                                                                     gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCa               >  1:149056/1‑100 (MQ=255)

                                                                                      ttCACTATGCCCGCCGAACGCAATCATGTTGACCAGCAGCCATCCTTTCTTACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg              <  2:666456/100‑1 (MQ=255)

                                                                                       tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  1:972698/1‑100 (MQ=255)

                                                                                       tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  2:1359281/1‑100 (MQ=255)

                                                                                       tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             <  1:898182/100‑1 (MQ=255)

                                                                                           aaTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTAt         <  2:306276/100‑1 (MQ=255)

                                                                                              gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      <  1:506578‑M1/96‑1 (MQ=255)

                                                                                              gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      <  1:2226493‑M1/96‑1 (MQ=255)

                                                                                                ccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa    <  1:691734‑M1/98‑1 (MQ=255)

GTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277721‑3277918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.