New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3563600 =	NA (NA)	6 (0.080)	4/164	NT	NA	noncoding (19/98 nt)	RIP256 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP256 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 4470461	NA (NA)					noncoding (81/88 nt)	RIP339 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP339 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

TTATCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGT  >  NC_000913/3563501‑3563699                                                                                                    |                                                                                                    ttATCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTa                                                                                                     <  1:1333128/100‑1 (MQ=255)  tATCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACCCAAAACTGCCTGATGCGCTACGCTTAt                                                                                                    >  1:2188679/1‑100 (MQ=255)   aTCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATc                                                                                                   <  1:1869899/100‑1 (MQ=255)    tCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCa                                                                                                  <  1:1223440/100‑1 (MQ=255)      gCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                                >  2:1258850/1‑100 (MQ=255)      gCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                                >  2:158831/1‑100 (MQ=255)      gCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                                <  2:1842311/100‑1 (MQ=255)       cTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                               <  1:1007638/100‑1 (MQ=255)       cTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                               <  1:213335/100‑1 (MQ=255)       cTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                               <  1:1288909/100‑1 (MQ=255)         ggCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGAATGATGACAAGCACAAAACTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                             >  1:1676787/1‑100 (MQ=255)               gtAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTgg                                                                                       >  1:908571/1‑100 (MQ=255)                tAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCAACGCTTATCAGGCCTACGTGGt                                                                                      >  1:335696/1‑100 (MQ=255)                 aaaTTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGtt                                                                                     >  1:1486891/1‑100 (MQ=255)                 aaaTTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGtt                                                                                     >  2:1450410/1‑100 (MQ=255)                  aaTTAGCGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGttt                                                                                    <  2:494457/100‑1 (MQ=255)                   aTTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa                                                                                   <  1:122177/100‑1 (MQ=255)                   aTTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa                                                                                   <  2:1486882/100‑1 (MQ=255)                     tAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATg                                                                                 <  1:1713643/100‑1 (MQ=255)                      ccgatctggTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGc                                                                                <  2:2192674/93‑1 (MQ=255)                      aaCGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGc                                                                                <  1:578311/100‑1 (MQ=255)                      aaCGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGc                                                                                >  2:244563/1‑100 (MQ=255)                      aaCGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGc                                                                                <  2:908569/100‑1 (MQ=255)                        cGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCaa                                                                              >  1:918573/1‑100 (MQ=255)                         gTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAat                                                                             <  2:1750725/100‑1 (MQ=255)                          tAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAata                                                                            >  1:696162/1‑100 (MQ=255)                            aGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCGTGATGCGCTACGCTTATCAGGACTACGTGGTTTATGCAatata                                                                          >  2:1523672/1‑100 (MQ=255)                             ggTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCagatcgg                                                                         >  1:2192694/1‑94 (MQ=255)                             ggTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAatatat                                                                         <  2:842474/100‑1 (MQ=255)                             cagtctCAGGCCAGATTGAAATCTGACCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAatatat                                                                         >  1:1774470/6‑100 (MQ=17)                               tGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTg                                                                       <  1:1435859/100‑1 (MQ=255)                               gtctCAGGCCAGATTGAAATCTGACCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTg                                                                       >  2:1710694/4‑100 (MQ=17)                                gATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGa                                                                      >  1:2039246/1‑100 (MQ=255)                                gATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGa                                                                      >  2:1134250/1‑100 (MQ=255)                                gATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGa                                                                      >  1:1976479/1‑100 (MQ=255)                                  tCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAt                                                                    <  2:1202806/100‑1 (MQ=255)                                  tCAGGCCAGATTGAAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAt                                                                    >  1:2135153/1‑100 (MQ=18)                                   cAGGCCAGATTGAAATCTGACCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAtt                                                                   >  1:1924752/1‑100 (MQ=18)                                    aGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAttt                                                                  >  1:36734/1‑100 (MQ=255)                                     ggTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTg                                                                 <  1:1155764/100‑1 (MQ=255)                                      gTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGc                                                                <  2:665934/100‑1 (MQ=255)                                        cAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCa                                                               <  2:818221/99‑1 (MQ=255)                                         aGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATg                                                             >  1:1156695/1‑100 (MQ=255)                                         aGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATg                                                             <  1:368611/100‑1 (MQ=255)                                           aTTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGt                                                           >  1:1399322/1‑100 (MQ=255)                                            tttCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTc                                                          >  2:255679/1‑100 (MQ=255)                                            tttCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTc                                                          >  2:283636/1‑100 (MQ=255)                                            tttCAATCTGGCATGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTc                                                          >  1:1569813/1‑100 (MQ=255)                                             ttCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCt                                                         <  2:808178/100‑1 (MQ=255)                                                aaTCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGt                                                      <  1:1583134/100‑1 (MQ=255)                                                aaTCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGt                                                      >  1:999324/1‑100 (MQ=255)                                                  tCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAg                                                    <  2:2095139/100‑1 (MQ=255)                                                   cTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAgg                                                   <  2:766920/100‑1 (MQ=255)                                                   cTGGCCTGAGACTGAGGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAgg                                                   <  2:1280514/100‑1 (MQ=255)                                                      gCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGACa                                                <  2:1976462/100‑1 (MQ=255)                                                        cTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGa                                              >  1:69595/1‑100 (MQ=255)                                                          gagaCTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATa                                            <  1:767126/100‑1 (MQ=255)                                                          gagaCTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATa                                            <  1:1332453/100‑1 (MQ=255)                                                           agaCTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATaa                                           <  1:1209612/100‑1 (MQ=255)                                                            gaCTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAg                                          <  1:1746171/100‑1 (MQ=255)                                                             aCTGATGACAAACACAAGACTGCCTGATGCGCTACGCTTATCAGGCCGACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGa                                         <  1:2123793/100‑1 (MQ=255)                                                              cTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGAc                                        >  1:1537703/1‑100 (MQ=255)                                                              cTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGAc                                        >  1:1537760/1‑100 (MQ=255)                                                              cTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTATTGTAGGCCAGATAAGa                                         >  2:404891/1‑99 (MQ=255)                                                               tgatgaCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACg                                       >  1:982352/1‑100 (MQ=255)                                                               tgatgaCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACg                                       <  2:1398444/100‑1 (MQ=255)                                                               tgatgaCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACg                                       >  1:2267854/1‑100 (MQ=255)                                                                   gaCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCa                                   <  1:1258857/100‑1 (MQ=255)                                                                    aCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCAc                                  <  1:951701/100‑1 (MQ=255)                                                                    aCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCAc                                  >  1:322588/1‑100 (MQ=255)                                                                     cAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACg                                 <  2:69594/100‑1 (MQ=255)                                                                       aaCACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTc                               <  2:852087/100‑1 (MQ=255)                                                                         cacaAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGc                             >  1:836118/1‑100 (MQ=255)                                                                          acaAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCa                            >  2:537750/1‑100 (MQ=255)                                                                          acaAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCa                            <  1:461416/100‑1 (MQ=255)                                                                           caAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCAt                           <  1:319550/100‑1 (MQ=255)                                                                            acgtaggcctgataagcgtagcgcATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATc                          <  1:1935674‑M1/76‑1 (MQ=255)                                                                               aCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCgg                       <  2:647291/100‑1 (MQ=255)                                                                                cTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGc                      <  1:1837108/100‑1 (MQ=255)                                                                                 ggcctgataagcgtagcgcATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCa                     <  1:991047‑M1/81‑1 (MQ=255)                                                                                 ggcctgataagcgtagcgcATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                      <  2:456922‑M1/80‑1 (MQ=255)                                                                                  gcctgataagcgtagcgcATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCAt                    <  1:2242287‑M1/82‑1 (MQ=255)                                                                                  gcctgataagcgtagcgcATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCAt                    <  1:1141703‑M1/82‑1 (MQ=255)                                                                                   cctgataagcgtagcgcATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATg                   <  1:2327400‑M1/83‑1 (MQ=255)                                                                                    cTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGa                  >  1:1939791/1‑100 (MQ=255)                                                                                     tGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGaa                 <  1:1736323/100‑1 (MQ=255)                                                                                     tGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGaa                 <  2:1614789/100‑1 (MQ=255)                                                                                      gATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAAc                <  1:1103325/100‑1 (MQ=255)                                                                                        tGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCAAGATAAGACGTTCACGTAGCATCAGGCATGAACaa              >  2:1613326/1‑100 (MQ=255)                                                                                        tGCGCTACGCTTATCAGGCCTACGTGGTTGATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACaa              <  1:1098477/100‑1 (MQ=255)                                                                                          cgcTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAg            <  2:36733/100‑1 (MQ=255)                                                                                          cgcTACGCTTATCAGGCCTACGTGGTTTATGCAAGATATTGAATTTTCATGGTCTTGTAGGCCAGATAATACGGTCACGTCGCATCCGGCATGAACaaa             >  2:792440/1‑99 (MQ=18)                                                                                           gcTATGTTTATCAGGCCTACGGGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAgc           <  2:986407/100‑1 (MQ=255)                                                                                           gcTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCCTGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAgc           <  2:1455341/100‑1 (MQ=255)                                                                                             tACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAgcgc         <  2:313706/100‑1 (MQ=255)                                                                                              aCGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAgcgc         >  2:1612341/1‑99 (MQ=255)                                                                                                    aTCAGGCCTACGTGGTTTATGCAAAATATTGAATTTGCATGGTCTTGTAGTACAGATAAAACGTTAACGTCACATCCGGCATGAACAAAGCGGACTTTGt  >  2:1524590/1‑100 (MQ=18)                                                                                                    |                                                                                                    TTATCGCTGGCGTCGTAAATTAACGTAAGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGT  >  NC_000913/3563501‑3563699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.