New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4148478NA (NA)16 (0.200) 8/164 NT NA noncoding (49/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4148511 NA (NA)noncoding (82/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 132 total aligned reads displayed.

AAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148380‑4148577
                                                                                                  |                                                                                                   
 aaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgc                                                                                                   >  1:1485338‑M1/1‑98 (MQ=255)
    gtgtGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccgg                                                                                                >  2:2005173‑M1/1‑95 (MQ=255)
      gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggat                                                                                              >  1:1362335‑M1/1‑93 (MQ=255)
       tggcctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATa                                                                                             <  1:321207‑M2/94‑1 (MQ=255)
       tgGCCTGAGGGGAGTGCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgcc                                                                                                  <  2:2284281‑M1/95‑4 (MQ=255)
         gcctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                                                                           >  1:2088370‑M2/5‑100 (MQ=255)
         gcctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                                                                           >  2:1703521‑M2/5‑100 (MQ=255)
          cctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  1:304312‑M2/4‑100 (MQ=255)
          cctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          <  2:2193190‑M2/97‑1 (MQ=255)
           ctGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAc                                                                                         >  1:650356‑M2/3‑100 (MQ=255)
               ggggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgc                                                                                       >  2:1014157/1‑98 (MQ=255)
               ggggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGt                                                                                     >  2:2104111/1‑100 (MQ=255)
               ggggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGt                                                                                     <  1:1923664/100‑1 (MQ=255)
                gggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                                                                                    >  1:1885592/1‑100 (MQ=255)
                   aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg                                                                                 <  1:2196613/100‑1 (MQ=255)
                   aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg                                                                                 <  1:1985154/100‑1 (MQ=255)
                     ttCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCg                                                                               <  1:1145653/100‑1 (MQ=255)
                        gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg                                                                            <  1:833785/100‑1 (MQ=255)
                          tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  1:241859‑M2/100‑1 (MQ=255)
                          tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  2:1363144‑M2/100‑1 (MQ=255)
                           gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAgagatcgga                                                                         >  2:2169846/1‑92 (MQ=255)
                           gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAgagatcgga                                                                         >  2:1686202/1‑92 (MQ=255)
                           gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAT                                                                         >  2:2083114‑M2/1‑100 (MQ=255)
                            tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGACCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC                                                                        <  2:846834‑M2/100‑1 (MQ=255)
                            naaacATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC                                                                        <  1:1126501‑M2/99‑1 (MQ=255)
                             acagctcgcggcagtTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTTCCGCCGCGAGCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC                                                                       >  1:405433‑M2/8‑100 (MQ=255)
                             aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatcc                                                                       <  2:1591580‑M1/100‑31 (MQ=255)
                             aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATACGACGCGTCAAGCGTCGCATtc                                                                       <  2:2246735‑M2/100‑3 (MQ=255)
                              aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg                                                                      <  2:914179‑M1/100‑32 (MQ=255)
                              aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg                                                                      <  1:90703‑M1/100‑32 (MQ=255)
                              aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      >  1:48537‑M2/1‑100 (MQ=255)
                               aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccgg                                                                     <  2:31826‑M1/100‑33 (MQ=255)
                               aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccgg                                                                     <  1:944516‑M1/100‑33 (MQ=255)
                               aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGG                                                                     >  1:2077151‑M2/1‑100 (MQ=255)
                                cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGC                                                                    <  2:330563‑M2/100‑1 (MQ=255)
                                cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGC                                                                    >  1:1217408‑M2/1‑100 (MQ=255)
                                cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGC                                                                    <  2:1484161‑M2/100‑1 (MQ=255)
                                cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGC                                                                    <  2:699986‑M2/100‑1 (MQ=255)
                                 aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  1:1591975‑M1/100‑35 (MQ=255)
                                 aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  2:500200‑M1/100‑35 (MQ=255)
                                 aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  1:1593013‑M1/100‑35 (MQ=255)
                                 aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTGATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  2:1675263‑M1/100‑35 (MQ=255)
                                    gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                                >  1:1071932/1‑100 (MQ=255)
                                     cGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa                                                               >  1:1122578/1‑100 (MQ=255)
                                      ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcctacag                                                              <  2:1619766‑M1/100‑40 (MQ=255)
                                       gCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc                                                             >  1:280907/1‑100 (MQ=255)
                                        cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcg                                                            <  2:2233620/100‑1 (MQ=255)
                                          gTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGcc                                                          >  1:1142993/1‑100 (MQ=255)
                                            tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                                        <  1:393620/100‑1 (MQ=255)
                                            tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                                        >  2:2043562/1‑100 (MQ=255)
                                              tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggc                                                      >  2:304310‑M2/1‑86 (MQ=255)
                                              tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggc                                                      >  2:2355590‑M2/1‑86 (MQ=255)
                                              tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGc                                                      <  2:1638818/100‑1 (MQ=255)
                                               aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGCTAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTggtt                                                     <  1:1613913/100‑3 (MQ=255)
                                               aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                                     <  1:348171/100‑1 (MQ=255)
                                                ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                                     <  2:2334513/99‑1 (MQ=255)
                                                ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                    <  2:2161547/100‑1 (MQ=255)
                                                ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                    <  2:619987/100‑1 (MQ=255)
                                                  gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                   >  2:2371250/1‑99 (MQ=255)
                                                  gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  >  1:2083143/1‑100 (MQ=255)
                                                  gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  >  2:1935444/1‑100 (MQ=255)
                                                  gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  >  1:1697192/1‑100 (MQ=255)
                                                   ccGGATGTCGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATa                                                 <  1:211862/100‑1 (MQ=255)
                                                          tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          >  1:1975572/1‑100 (MQ=255)
                                                           ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:2165846/1‑100 (MQ=255)
                                                           ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:2169849/1‑100 (MQ=255)
                                                           ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:150175/1‑100 (MQ=255)
                                                           ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:2065401/1‑100 (MQ=255)
                                                             cGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAtt                                       <  1:1656824/100‑1 (MQ=255)
                                                             cGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAtt                                       >  2:931762/1‑100 (MQ=255)
                                                                 aaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAccc                                   <  1:2238794/100‑1 (MQ=255)
                                                                   cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                  <  2:826445/99‑1 (MQ=255)
                                                                    gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                <  2:1659385/100‑1 (MQ=255)
                                                                    gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                <  2:1142988/100‑1 (MQ=255)
                                                                     ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               <  2:1885577/100‑1 (MQ=255)
                                                                        tATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt                            >  2:2002372/1‑100 (MQ=255)
                                                                          tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          >  1:2229370/1‑100 (MQ=255)
                                                                            cAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagctcgcggcggtaggctggataaggcgtttacgccacat                        <  1:846211‑M2/100‑45 (MQ=255)
                                                                              gCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt                      <  1:503525/100‑1 (MQ=255)
                                                                               ccTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATa                     <  2:1697179/100‑1 (MQ=255)
                                                                               ccTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATa                     <  1:1967028/100‑1 (MQ=255)
                                                                                cTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAg                    <  1:1703534/100‑1 (MQ=255)
                                                                                cTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAg                    <  1:1014161/100‑1 (MQ=255)
                                                                                 tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                   <  1:756376/100‑1 (MQ=255)
                                                                                   ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  2:280905/100‑1 (MQ=255)
                                                                                   ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 >  1:330874/1‑100 (MQ=255)
                                                                                    cgccgcGATCTGTAGGCTGTATAAGACGCTTAAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  1:810104/99‑1 (MQ=38)
                                                                                     gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  2:1500984/1‑100 (MQ=255)
                                                                                        gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             >  2:938588/1‑99 (MQ=255)
                                                                                          gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          >  1:177918/1‑100 (MQ=255)
                                                                                            tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  2:2220148/100‑1 (MQ=255)
                                                                                            tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        >  1:1904479/1‑100 (MQ=255)
                                                                                             cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgcc       <  2:1619766‑M2/100‑62 (MQ=255)
                                                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaa   <  2:165706‑M2/100‑66 (MQ=255)
                                                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   <  2:1904463/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   >  1:356423/1‑100 (MQ=255)
                                                                                                 aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAACCAACTGATCGCCATAGGGCAGTGTGTCGTAATc   >  2:1362228/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaat  <  2:500200‑M2/100‑67 (MQ=255)
                                                                                                  ggCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaat  <  1:1591975‑M2/100‑67 (MQ=255)
                                                                                                  ggCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCg  <  1:1595674/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148380‑4148577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.