| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4171607 | 0 (0.000) | 54 (0.680) | 11/166 | NT | 100% | intergenic (+63/‑30) | rrlB/rrfB | 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon |
| ? | NC_000913 | = 4213022 | NA (NA) | intergenic (+76/‑18) | rrlE/rrfE | 23S ribosomal RNA of rrnE operon/5S ribosomal RNA of rrnE operon | |||||
ACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC > NC_000913/4171519‑4171706 | aCTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcg < 1:504515‑M1/100‑12 (MQ=255) cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgt < 2:1939851‑M1/100‑13 (MQ=255) tGAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttct < 1:969250‑M1/100‑16 (MQ=255) gAACCGTGAGGCTTAACCTTACTACGCCGAATCTGTTCTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctg < 2:1611728‑M1/100‑17 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgtgttctg < 2:129246‑M1/100‑17 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 1:359672‑M1/100‑18 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:1266249‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat > 1:1541129‑M1/1‑82 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1217749‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1559561‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:788709‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGTCGAAGGTGTTTTGGCGGATTGAGAGAAGCTTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1420532‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCGTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1124404‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:2298662‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:2130065‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTCTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:866554‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:1818492‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1541118‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:698633‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:706647‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:2217170‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:105429‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:2278321‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:1311545‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:1515153‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:384422‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:1937043‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCATGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:2378508‑M1/100‑21 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 1:1539224‑M1/100‑21 (MQ=255) gTGAGGCTTGACCTTACAACGCCGAATCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATATAGCTTAAATCAGAccgcttctgcgttctgattt < 2:1568917‑M1/99‑21 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1172105‑M1/98‑20 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttcttcgttctgatttaa < 2:1474995‑M1/100‑23 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 2:416441‑M1/100‑23 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 2:2388135‑M1/100‑24 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 1:174446‑M1/100‑24 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 1:2068252‑M1/100‑25 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:125720‑M1/100‑25 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 1:2033707‑M1/100‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:1465782‑M1/100‑26 (MQ=255) aGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:1465775‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:172128‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:2158269‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:526095‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:527803‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCCGATTGAGAGACGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:393535‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:929708‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 2:934723‑M1/100‑27 (MQ=255) gCTTACCCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:1069706‑M1/100‑27 (MQ=255) ctaaacctTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgta < 2:2223954‑M1/97‑29 (MQ=255) tAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaaggatcgga > 1:492124‑M1/1‑70 (MQ=255) cTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggc < 1:1169322‑M1/100‑35 (MQ=255) ttttGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcatc < 1:826797‑M1/100‑53 (MQ=255) gagaAGATTTTCAGCCTGATACAGATTAAATCACAccgcttctgcgttctcacttaatctgtatcaggccgaaaatcttctctcaatccgccaaaacacc < 2:1665880‑M1/100‑66 (MQ=255) aTTTTCAGCCTGATACAGATTAAATCAGAacgcagaagcggtctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggc > 1:1177045‑M1/1‑29 (MQ=255) cgatctagaccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcac < 1:2334780‑M1/94‑92 (MQ=255) aTCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggt < 2:1967464‑M1/100‑95 (MQ=255) aTCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacgga > 2:176547‑M1/1‑6 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggtt > 1:1893158‑M1/1‑5 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggtt > 1:2246980‑M1/1‑5 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggtt < 2:1089802‑M1/100‑96 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggt > 1:362995‑M1/1‑5 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:937187‑M1/100‑97 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc > 2:1666941‑M1/1‑4 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc > 1:651944‑M1/1‑4 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:1109567‑M1/100‑97 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:1363217‑M1/100‑97 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc > 2:1314842‑M1/1‑4 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca > 1:567757‑M1/1‑3 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca > 2:1981460‑M1/1‑3 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca < 1:2282779‑M1/100‑98 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca > 1:1673533‑M1/1‑3 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacagatcg > 2:2334759‑M1/1‑3 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat > 1:1405142‑M1/1‑2 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat > 2:1120206‑M1/1‑2 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcgccgttttaaggttaagcctcacggttc > 2:1110275‑M1/1‑2 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaataccttcggcgttgtaaggttaagcctcacggttcatt < 2:1280283‑M1/100‑100 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 2:203049‑M1/100‑100 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 1:2341393‑M1/100‑100 (MQ=255) | ACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC > NC_000913/4171519‑4171706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |