New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)6 (0.080) 5/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 116 total aligned reads displayed.

GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060
                                                                                                   |                                                                                                   
gATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAg                                                                                                     >  2:2144855/1‑100 (MQ=255)
 aTTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGGCGCTGGCTTCGATTAACTAAATGAAATATGTGAAAATCGTAGg                                                                                                    >  2:496479‑M1/1‑99 (MQ=255)
 aTTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGg                                                                                                    >  2:1837696‑M1/1‑99 (MQ=255)
 aTTTATTGCTGCGGGCGACGGGGGGAGTGGGTGTTTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGg                                                                                                    >  2:1745968‑M1/1‑99 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGCAAATTGTAGgccgg                                                                                                >  2:1621493‑M1/1‑95 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgg                                                                                                <  1:486469‑M1/100‑6 (MQ=255)
      ttGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgga                                                                                               >  2:222866‑M1/1‑94 (MQ=255)
      ttGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgga                                                                                               >  2:1636761‑M1/1‑94 (MQ=255)
           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          >  1:1932598/1‑100 (MQ=255)
             gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                        >  1:1811052/1‑100 (MQ=255)
             gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                        >  1:684728/1‑100 (MQ=255)
              ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcgc                                                                                       >  1:2369881/1‑100 (MQ=255)
              ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                         >  2:543744/1‑98 (MQ=255)
               gCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCt                                                                                      >  1:154249/1‑100 (MQ=255)
                cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                     >  2:47069/1‑100 (MQ=255)
                 gACGGGGGGAGTGTGTGTGTAAGAGTATAAGACCGCTGCGACGCTGGTTTCGATTAACTAAATGAAATCTGTGACGATTGTTGGCCTGACAAGgc                                                                                         <  2:791540/95‑1 (MQ=255)
                  aCGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgc                                                                                   <  1:391566/100‑1 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATTAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                  <  1:1041872/100‑1 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                  >  1:68417/1‑100 (MQ=255)
                    ggggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCgcgc                                                                                 <  2:148966/100‑1 (MQ=255)
                     nggggAGAGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCgcgc                                                                                 >  2:582569/2‑99 (MQ=255)
                            tgtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCG                                                                         <  1:768983‑M2/100‑1 (MQ=255)
                             gtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGG                                                                        >  1:1665282‑M2/1‑100 (MQ=255)
                             gtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGG                                                                        >  1:898557‑M2/1‑100 (MQ=255)
                             gtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGG                                                                        >  1:2352050‑M2/1‑100 (MQ=255)
                              tgtgtgtAAGCGTAGACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggc                                                                       <  2:2207704‑M1/100‑31 (MQ=255)
                               gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcc                                                                      <  1:510704‑M1/100‑32 (MQ=255)
                                 gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAGCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                    >  1:2032491/1‑100 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  2:1391451/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTGCGAGTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                    <  2:716298/99‑1 (MQ=255)
                                    tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                 >  1:1484733/1‑100 (MQ=255)
                                    tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                 >  1:1880066/1‑100 (MQ=255)
                                     aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                <  1:1805397/100‑1 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctacaatt                                                               <  1:235281‑M1/100‑39 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               >  2:1921157/1‑100 (MQ=255)
                                       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctacaatt                                                               <  2:1617573‑M1/99‑39 (MQ=255)
                                       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                              >  1:1770876/1‑100 (MQ=255)
                                       gCGTATACGACTGATGCGACGCTGGTTTCGAGTAACTAAATGAAATATGTGAAGATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                              <  2:190967/100‑1 (MQ=255)
                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCGAGCGCCTTGTCCGGCctacaattttcac                                                          >  1:856718‑M2/1‑87 (MQ=255)
                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  2:1376814/100‑1 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  1:222867/100‑1 (MQ=255)
                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       >  1:517824/1‑100 (MQ=255)
                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       >  1:635136/1‑100 (MQ=255)
                                               gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                      >  1:57045/1‑100 (MQ=255)
                                               gACTGACGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                      <  1:1492834/100‑1 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    >  2:664515/1‑100 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATAGGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCGGCATCCGGCATTGTTCATTTGCTGTAGa                                                    >  2:442118/1‑100 (MQ=255)
                                                  tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                   <  1:750102/100‑1 (MQ=255)
                                                  tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                   <  1:2185504/100‑1 (MQ=255)
                                                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                  >  2:1281867/1‑100 (MQ=255)
                                                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGATCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                  <  2:1271708/100‑1 (MQ=255)
                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                <  1:2144873/100‑1 (MQ=255)
                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                <  2:260335/100‑1 (MQ=255)
                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                <  2:1372409/100‑1 (MQ=255)
                                                          cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                           <  1:1968791/100‑1 (MQ=255)
                                                          cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                           <  1:1100088/100‑1 (MQ=255)
                                                           gCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                           <  2:2362660/99‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  1:1281874/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  1:543746/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCGCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  2:201248/100‑1 (MQ=255)
                                                             tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                        <  2:1186744/100‑1 (MQ=255)
                                                             tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                        <  1:1221450/100‑1 (MQ=255)
                                                             gggtTGCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggaggcggcgcgagcgccttgtccggcctacaattttcacatatttcatttagttaat                                        <  1:551925‑M1/99‑62 (MQ=255)
                                                              tgTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       <  2:101298/99‑1 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       >  2:1787857/1‑100 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       >  2:1787923/1‑100 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       >  1:1041752/1‑100 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       <  1:479910/100‑1 (MQ=255)
                                                               gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCaa                                      >  1:101299/1‑99 (MQ=255)
                                                               gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                      <  2:1831049/100‑1 (MQ=255)
                                                                tttCGATTAACTAAATGAAATATGAGAAAAAAGTAAGCCGGACAAGACGCTCGCGCCGCATCCGGCATCGTACATTTGCAGTAGATCACACTCATGCATa                                     >  2:150089/1‑100 (MQ=25)
                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  1:1504764/100‑1 (MQ=255)
                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  1:169724/100‑1 (MQ=255)
                                                                 ttCGATTAACTAAATAAAATATGTGAAAATTGTAGTCCGTACAAGGCGCTCGCGCCGCATCCTGCATTGTTCATTTGCTGTAGATGACACTCATTCATAc                                    <  2:2377024/100‑1 (MQ=38)
                                                                    gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                 >  2:2008214/1‑100 (MQ=255)
                                                                       tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                              >  1:2071838/1‑100 (MQ=255)
                                                                       tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                              >  1:50651/1‑100 (MQ=255)
                                                                       tAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                              <  1:360231/100‑1 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGTACAAGGCGCTCGCGCCGCATCCGGCATTGTTCCTTTGCTGTAGATGACACTCATGCATACAGTATCg                             <  1:915333/100‑1 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             <  1:917816/100‑1 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             <  1:917760/100‑1 (MQ=255)
                                                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                            <  1:2201132/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  1:461021/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  2:1831171/100‑1 (MQ=255)
                                                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  2:1498428/1‑100 (MQ=255)
                                                                               tGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAc                      <  1:1072972/100‑1 (MQ=255)
                                                                                    tatGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc                 <  1:1757094/100‑1 (MQ=255)
                                                                                      tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg               >  2:267237/1‑100 (MQ=255)
                                                                                       gtgAAAATTGTAGgccggacaaggcgctcgcgccttgtccggcctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtat              >  1:856718‑M1/1‑13 (MQ=255)
                                                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt             >  1:1938668/1‑100 (MQ=255)
                                                                                         gAAAATTGTAGGCCGGACACGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGAGCCAGTTa            >  2:404397/1‑100 (MQ=255)
                                                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa            >  2:1586520/1‑100 (MQ=255)
                                                                                           aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc          >  2:2140288/1‑100 (MQ=255)
                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg        <  2:1538924/100‑1 (MQ=255)
                                                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc      <  1:1714062/100‑1 (MQ=255)
                                                                                                 tAGGCCGGACAAGGCGATCGCGCCGCATCCGGCATTGTTCCTTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACTCGCCAGTTATCAgg       <  2:438681/97‑1 (MQ=255)
                                                                                                  aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCGAGTTATCAGgctgc   >  2:1623783/1‑100 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac  <  1:510704‑M2/100‑70 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  1:1475771/1‑100 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  1:2131129/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.