New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 461476281 (0.940)7 (0.090) 4/170 NT 7.7% coding (782/864 nt) yjjW putative pyruvate formate lyase activating enzyme
?NC_000913 = 4614786 90 (1.100)coding (758/864 nt) yjjW putative pyruvate formate lyase activating enzyme
Rejected: Frequency below cutoff threshold.

Only 100 of 116 total aligned reads displayed.

AGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCA  >  NC_000913/4614663‑4614861
                                                                                                   |                                                                                                   
aGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCG                                                                                                     >  1:1931637‑M1/1‑100 (MQ=255)
 ggCCGTATCCGGCATGTCACAAATAGCGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACCCATCAGCCAACGGCTCAACGTCTTCCGGCGt                                                                                                    <  1:1384616/100‑1 (MQ=255)
  gCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTg                                                                                                   >  1:1591377/1‑100 (MQ=255)
   ccGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCTCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGt                                                                                                    >  2:252542/1‑98 (MQ=255)
   ccGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTgg                                                                                                  <  2:1474869/100‑1 (MQ=255)
          cGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGc                                                                                           <  2:2022560/100‑1 (MQ=255)
           ggCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGcc                                                                                          >  1:564567/1‑100 (MQ=255)
               tGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGc                                                                                      >  1:1066385/1‑100 (MQ=255)
                gTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCt                                                                                     <  2:1634206/100‑1 (MQ=255)
                 tCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCtt                                                                                    >  2:1806915/1‑100 (MQ=255)
                  cacaAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCTCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCTGCGTGGCGCTCGCCCAGCttt                                                                                   >  2:1389022/1‑100 (MQ=255)
                   acaAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTg                                                                                  >  2:1511313/1‑100 (MQ=255)
                   acaAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTg                                                                                  <  1:1177789/100‑1 (MQ=255)
                    caAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTgc                                                                                 <  2:373114/100‑1 (MQ=255)
                    caAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTgc                                                                                 >  1:348625/1‑100 (MQ=255)
                        tAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGcc                                                                              >  2:897704/1‑99 (MQ=255)
                          gagCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacg                                                                           <  1:1440804‑M1/100‑27 (MQ=255)
                          gagCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTcg                                                                           >  1:133310‑M2/1‑98 (MQ=255)
                          gagCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTcg                                                                           >  1:2053228‑M2/1‑98 (MQ=255)
                           agCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTcgc                                                                          >  2:769206‑M2/1‑97 (MQ=255)
                            gcgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacgtc                                                                         <  1:1605570‑M1/100‑29 (MQ=255)
                            gcgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacgcc                                                                         <  2:248568‑M1/100‑29 (MQ=255)
                            gcgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacgcc                                                                         <  2:534408‑M1/100‑29 (MQ=255)
                            gcgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGGCTTCCGGCGaggcgcaaagctgggcgagcgccacgcc                                                                         <  2:1269963‑M1/100‑29 (MQ=255)
                             cgcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCa                                                                        <  1:1790796/100‑1 (MQ=255)
                              gcCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacgccgg                                                                       <  1:1793273‑M1/100‑31 (MQ=255)
                               ccGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGaggcgcaaagctgggcgagcgccacgccgga                                                                      <  1:1290461‑M1/100‑32 (MQ=255)
                               ccGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATa                                                                      <  2:534668/100‑1 (MQ=255)
                                cGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATac                                                                     >  1:1637973/1‑100 (MQ=255)
                                 ggAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATaca                                                                    >  1:437912/1‑100 (MQ=255)
                                 ggAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATaca                                                                    >  2:514842/1‑100 (MQ=255)
                                       atCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGt                                                              >  1:754698/1‑100 (MQ=255)
                                        tCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTg                                                             >  1:768582/1‑100 (MQ=255)
                                        tCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTg                                                             >  1:1716411/1‑100 (MQ=255)
                                          aaCCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTggg                                                           >  1:2027469/1‑100 (MQ=255)
                                          aaCCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTggg                                                           <  1:1509606/100‑1 (MQ=255)
                                           aCCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGc                                                          >  1:285134/1‑100 (MQ=255)
                                            ccGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCa                                                         <  1:1624620/100‑1 (MQ=255)
                                                  cACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAc                                                   <  2:288084/100‑1 (MQ=255)
                                                    ccccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAcgc                                                 >  1:1733821/1‑100 (MQ=255)
                                                     cccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAAcgcg                                                <  1:1938237/100‑1 (MQ=255)
                                                      ccGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGt                                               <  1:311977/100‑1 (MQ=255)
                                                        gcgcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCAATACACGCCGTGGGCATGAAACGCGtt                                              >  2:2149855/1‑99 (MQ=255)
                                                          gcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAg                                           <  2:373300/100‑1 (MQ=255)
                                                          gcACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGGGGCGCTCGCCCAGCTTTGCGCCCCGCCATACACGCCGTGGGCATGAAACGCGGTCa                                            >  2:2045366/1‑99 (MQ=255)
                                                           cACCTTTAATGCATCAGCCAACGTCTCAACGTTTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATTCACGCCGTTGGCATGAAACGCGTTCAgg                                          <  1:1389030/100‑1 (MQ=255)
                                                             ccTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCg                                        <  1:275731/100‑1 (MQ=255)
                                                              cTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGt                                       >  1:1206269/1‑100 (MQ=255)
                                                              cTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGt                                       >  1:978517/1‑100 (MQ=255)
                                                               tttAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTa                                      >  2:1831193/1‑100 (MQ=255)
                                                                 tAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTAcc                                    >  1:1694498/1‑100 (MQ=255)
                                                                 tAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTAcc                                    <  1:1469753/100‑1 (MQ=255)
                                                                 tAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTAcc                                    <  1:879056/100‑1 (MQ=255)
                                                                  aaCGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCg                                   >  2:1553797/1‑100 (MQ=255)
                                                                  aaCGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCg                                   >  1:1976942/1‑100 (MQ=255)
                                                                    cGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGa                                 <  1:1269851/100‑1 (MQ=255)
                                                                    cGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGa                                 >  1:2345925/1‑100 (MQ=255)
                                                                     gCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGaa                                >  2:53941/1‑100 (MQ=255)
                                                                     gCATCAGCCAACGGCTCAACGTCTTCCGGCGGGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGaa                                >  2:1415465/1‑100 (MQ=255)
                                                                      cATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAAc                               <  2:80372/100‑1 (MQ=255)
                                                                         cAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATc                            >  1:829445/1‑100 (MQ=255)
                                                                         cAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATc                            <  1:372026/100‑1 (MQ=255)
                                                                          aGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACAttg                           >  2:2185899/1‑98 (MQ=255)
                                                                            ccAACGGCTCAACGTCTTCCGGCGTGGAGCTCGCCCAGCTTTGCGCCTCGACATACACGCCATGGGCATGAAACACGtt                                              >  2:1149293/1‑79 (MQ=255)
                                                                             cAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCg                        >  2:1774726/1‑100 (MQ=255)
                                                                             cAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCg                        <  2:78955/100‑1 (MQ=255)
                                                                              aaCGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGa                       <  1:1213025/100‑1 (MQ=255)
                                                                                  gCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTcc                   >  1:2189090/1‑100 (MQ=255)
                                                                                   cTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTccc                  <  1:26722/100‑1 (MQ=255)
                                                                                   cTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTccc                  >  2:930481/1‑100 (MQ=255)
                                                                                     cAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCtt                <  1:1850461/100‑1 (MQ=255)
                                                                                     cAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCtt                >  1:1649542/1‑100 (MQ=255)
                                                                                     cAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCtt                <  1:2045252/100‑1 (MQ=255)
                                                                                      aaCGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTg               <  1:1115068/100‑1 (MQ=255)
                                                                                      aaCGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTg               <  1:2075677/100‑1 (MQ=255)
                                                                                      aaCGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTg               <  1:1115197/100‑1 (MQ=255)
                                                                                       aCGTCTTCCGGCGTGGCGCTCGCCCCGCTTTCCGCCCCGCCATACACGCCGTGGGCATGAAACGCGCTCAGCCGTACCGGAACATCGCCGAGTCCCtt                >  2:2021206/1‑98 (MQ=255)
                                                                                       aCGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGa              <  2:1156819/100‑1 (MQ=255)
                                                                                          tCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATaa           <  2:1485436/100‑1 (MQ=255)
                                                                                            ttCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAc         >  2:2010938/1‑100 (MQ=255)
                                                                                             tCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccgg        <  1:1290461‑M2/100‑70 (MQ=255)
                                                                                             tCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcg        <  1:584925/100‑1 (MQ=255)
                                                                                              ccGGCGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggc       <  1:1793273‑M2/100‑71 (MQ=255)
                                                                                              ccGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgc       >  1:244320/1‑100 (MQ=255)
                                                                                              ccGGCGTGCCGCGCGCCCATCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcg        <  2:2165840/99‑1 (MQ=255)
                                                                                               cGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgcc      >  2:1754896/1‑100 (MQ=255)
                                                                                               cGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgcc      <  1:1573914/100‑1 (MQ=255)
                                                                                                ggCGaggcgcaaagctgggccagcgccacgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgc     <  1:391945‑M1/100‑97 (MQ=255)
                                                                                                ggCGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagccgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgc     <  2:1269963‑M2/100‑73 (MQ=255)
                                                                                                ggCGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgc     <  2:248568‑M2/100‑73 (MQ=255)
                                                                                                ggCGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgc     <  2:534408‑M2/100‑73 (MQ=255)
                                                                                                ggCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgccg     <  1:1062961/100‑1 (MQ=255)
                                                                                                ggCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgccg     >  2:194175/1‑100 (MQ=255)
                                                                                                gacgtGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgc     <  1:1605570‑M2/98‑73 (MQ=255)
                                                                                                 gCGaggcgcaaagctgggcgagcgccacgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgct    >  2:769206‑M1/1‑3 (MQ=255)
                                                                                                 gCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACGCGCCGTGTGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAAcgccg     <  2:1149302/99‑1 (MQ=255)
                                                                                                  cGaggcgcaaagctgggcgagcgccacgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgctc   >  1:133310‑M1/1‑2 (MQ=255)
                                                                                                  cGTGGCGCTCGCCCAGCTTTGCGCCTcgccggaagacgttgagccgttggctgatgcgttaaaggtgcgcggggtgagccggttgatatttccggcgctc   <  1:1440804‑M2/100‑75 (MQ=255)
                                                                                                  cGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACgccgcc   <  2:678382/100‑1 (MQ=255)
                                                                                                   gTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTTGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTGGATAAACGCCGCCa  >  1:108032/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTAACGCATCAGCCAACGGCTCAACGTCTTCCGGCGTGGCGCTCGCCCAGCTTTGCGCCTCGCCATACACGCCGTGGGCATGAAACGCGTTCAGGCGTACCGGAACATCGCCGAGTCCCTTGATAAACGCCGCCA  >  NC_000913/4614663‑4614861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.