New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 430968 =NA (NA)4 (0.050) 3/164 NT NA noncoding (1/98 nt) REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 832314 = NA (NA)noncoding (26/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 121 total aligned reads displayed.

GGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCAT  >  NC_000913/430869‑431067
                                                                                                   |                                                                                                   
 tgctgacaagtgcttgttgtgaaatgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattgaatatattgcagagttcacgtagGc                                                                                                    <  1:558374‑M1/2‑1 (MQ=255)
  ggAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGcc                                                                                                   <  2:1132827/100‑1 (MQ=255)
  ggAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGcc                                                                                                   >  2:157617/1‑100 (MQ=255)
  ggAAAATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGcc                                                                                                   <  1:1844174/100‑1 (MQ=255)
  gctgacaagtgcttgttgtgaaatgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtagGcc                                                                                                   <  1:1413040‑M1/3‑1 (MQ=255)
   gAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCt                                                                                                  <  2:759507/100‑1 (MQ=255)
   ctgacaagtgcttgttgtgaaatgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtagGCCt                                                                                                  <  1:1718683‑M1/4‑1 (MQ=255)
    tgacaagtgcttgttgtgaaatgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtagGCCTg                                                                                                 >  2:356159‑M1/96‑100 (MQ=255)
     aGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGa                                                                                                <  2:745853/100‑1 (MQ=255)
       aTGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATg                                                                                              <  1:278355/100‑1 (MQ=255)
       aTGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCCGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATg                                                                                              >  1:2055575/1‑100 (MQ=255)
       aTGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCCGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATg                                                                                              >  1:2053982/1‑100 (MQ=255)
        tGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATgc                                                                                             >  2:2100009/1‑100 (MQ=255)
        tGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATgc                                                                                             <  2:1841899/100‑1 (MQ=255)
         gcgcAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAAAAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATgcg                                                                                            <  2:497269/100‑1 (MQ=255)
          cgcAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATgcgc                                                                                           >  2:1448266/1‑100 (MQ=255)
           gcAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCt                                                                                          >  2:1754481/1‑100 (MQ=255)
           gcAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCt                                                                                          >  1:1663159/1‑100 (MQ=255)
             aGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTAc                                                                                        <  1:753715/100‑1 (MQ=255)
               aaaGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGc                                                                                      <  2:235692/100‑1 (MQ=255)
               aaaGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGc                                                                                      <  1:143229/100‑1 (MQ=255)
                aaGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGGAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCt                                                                                     <  2:1015619/100‑1 (MQ=255)
                 aGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCtt                                                                                    <  2:693716/100‑1 (MQ=255)
                   aTGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTAt                                                                                  >  1:1315356/1‑100 (MQ=255)
                    tGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATc                                                                                 >  2:440027/1‑100 (MQ=255)
                    tGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATc                                                                                 <  1:38473/100‑1 (MQ=255)
                       cGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAgg                                                                              <  2:2084934/100‑1 (MQ=255)
                        ggTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGc                                                                             >  1:422005/1‑100 (MQ=255)
                        ggTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGc                                                                             <  2:915561/100‑1 (MQ=255)
                        atgccggatgcggcgtgaacgccttatccggcctacaaaaacatgcaaattcaatagattgcagagattatgtagGCCTGATGCGCTACGCTTATCAGGc                                                                             >  1:224018‑M1/76‑100 (MQ=255)
                        atgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtagGCCTGATGCGCTACGCTTATCAGGc                                                                             >  2:2156503‑M1/76‑100 (MQ=255)
                          tGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                           <  1:1265841/100‑1 (MQ=255)
                           gAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                          >  2:790763/1‑100 (MQ=255)
                             tctgAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                        <  2:1994409/97‑1 (MQ=255)
                             ggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtagGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                        >  1:804768‑M1/71‑100 (MQ=255)
                              gCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGt                                                                       <  1:2244170/100‑1 (MQ=255)
                              gCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGt                                                                       >  1:327177/1‑100 (MQ=255)
                               cGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGtt                                                                      <  2:2313470/100‑1 (MQ=255)
                                  aGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTAtt                                                                   >  2:1143334/1‑100 (MQ=255)
                                   gTACAACCCATTCGCTGAGCTGAAAGAGATGATAACCGAGAACGGGTGGTTAAAACGTACATTTGACTGATGAGCTCCGCTCCTCAAGCCTACg                                                                        >  2:1661194/1‑94 (MQ=255)
                                   gTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTAttt                                                                  <  1:1029369/100‑1 (MQ=255)
                                      cAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAg                                                               <  1:1143339/100‑1 (MQ=255)
                                       aaCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGc                                                              <  1:2325238/100‑1 (MQ=255)
                                        aCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCa                                                             >  2:1366191/1‑100 (MQ=255)
                                        aCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCa                                                             >  2:1907935/1‑100 (MQ=255)
                                         cccATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCaa                                                            >  2:48850/1‑100 (MQ=255)
                                          ccATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAat                                                           <  1:84151/100‑1 (MQ=255)
                                           cATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCa                                                             >  2:1415823/1‑97 (MQ=255)
                                           cATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAata                                                          <  1:231002/100‑1 (MQ=255)
                                           cATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAata                                                          >  2:154903/1‑100 (MQ=255)
                                           cATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAata                                                          >  2:1004740/1‑100 (MQ=255)
                                               cGCTTACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAAAGTAACATTGCCTGATGCGCAACGCTTATCAGGCCTACGTTATTTCAGCAataaa                                                        >  2:2151767/1‑96 (MQ=37)
                                                gCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTg                                                     <  1:1721562/100‑1 (MQ=255)
                                                gCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTg                                                     <  2:1348768/100‑1 (MQ=255)
                                                gCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTg                                                     <  2:865622/100‑1 (MQ=255)
                                                gCTGACCTGAAAGCGAGGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGAGGCGCTACGCCTATCAGGCCTACGTTATTTCAGCAATACATTg                                                     >  2:1796733/1‑100 (MQ=255)
                                                 cTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGa                                                    >  2:388033/1‑100 (MQ=255)
                                                   gACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAAt                                                  <  1:1704271/100‑1 (MQ=255)
                                                     ccTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAAttt                                                >  2:29663/1‑100 (MQ=255)
                                                      cTGAAAGCGATGATGAACAAGAAGAAGTTATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTa                                               <  2:2345878/100‑1 (MQ=255)
                                                      cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTa                                               <  1:1083468/100‑1 (MQ=255)
                                                      cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTa                                               >  2:257412/1‑100 (MQ=255)
                                                      cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTa                                               <  2:1529629/100‑1 (MQ=255)
                                                       tGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCATGATGCGATACGCTTATCAGGTCTACGTTATTTAAGCAATATATTTAATTTAc                                              >  2:580948/1‑100 (MQ=255)
                                                        gAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCTCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACg                                             <  2:618440/100‑1 (MQ=255)
                                                          aaGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTg                                           <  1:1396530/100‑1 (MQ=255)
                                                               atgatgAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCTGCAATATATTGAATTTACGTGCtttt                                      <  1:1448274/100‑1 (MQ=255)
                                                               atgatgAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCtttt                                      >  1:1898733/1‑100 (MQ=255)
                                                               atgatgAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCtttt                                      >  1:1985283/1‑100 (MQ=255)
                                                                 gatgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgt                                    <  2:372897/100‑1 (MQ=255)
                                                                  atgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgtt                                   <  1:1384605/100‑1 (MQ=255)
                                                                  atgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgtt                                   >  1:469180/1‑100 (MQ=255)
                                                                   tgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgttg                                  >  2:116737/1‑100 (MQ=255)
                                                                   tgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgttg                                  <  1:388035/100‑1 (MQ=255)
                                                                     aaCAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGc                                <  1:279347/100‑1 (MQ=255)
                                                                      aCAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGATACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGcc                               <  2:1677029/100‑1 (MQ=255)
                                                                        aagaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCgg                             <  2:885862/100‑1 (MQ=255)
                                                                        aagaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAAGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttatt                                   >  2:2252478/1‑94 (MQ=255)
                                                                         agaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGa                            >  2:823791/1‑100 (MQ=255)
                                                                         agaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGa                            >  1:2092093/1‑100 (MQ=255)
                                                                         agaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGa                            >  2:586423/1‑100 (MQ=255)
                                                                         agaagaagTGATTAAAACGTAAAAGTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGa                            <  2:1439793/100‑1 (MQ=255)
                                                                              aagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAg                       <  2:1664636/100‑1 (MQ=255)
                                                                              aagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAg                       <  1:1182708/100‑1 (MQ=255)
                                                                               agTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGc                      >  2:444166/1‑100 (MQ=255)
                                                                                 tGATTAAAGCGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGt                    <  1:1796748/100‑1 (MQ=255)
                                                                                 tGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGt                    <  1:126276/100‑1 (MQ=255)
                                                                                  gATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGtt                   <  1:249478/100‑1 (MQ=255)
                                                                                  gATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGtt                   >  1:2017374/1‑100 (MQ=255)
                                                                                  gATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGtn                   <  1:832900/100‑2 (MQ=255)
                                                                                     tAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAc                >  1:1055271/1‑100 (MQ=255)
                                                                                     tAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCCGACAAAGCGTTTAc                >  2:2189643/1‑100 (MQ=255)
                                                                                      aaaaCGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcg               >  1:320773/1‑100 (MQ=255)
                                                                                       aaaCGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcgc              <  2:569046/100‑1 (MQ=255)
                                                                                         aCGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcgccg            <  1:2385363/100‑1 (MQ=255)
                                                                                               aaTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCg      >  1:1493865/1‑100 (MQ=255)
                                                                                                aTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCgg     <  1:1719969/100‑1 (MQ=255)
                                                                                                aTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCgg     <  1:1423501/100‑1 (MQ=255)
                                                                                                aTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCgg     <  2:1587708/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCAt  >  1:2112427‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCAT  >  NC_000913/430869‑431067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.