| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1045701 = | 67 (0.780) | 11 (0.140) | 8/164 | NT | 15.5% | coding (103/1140 nt) | gfcE | putative O‑antigen capsule outer membrane auxillary protein export channel |
| ? | NC_000913 | 1045739 = | 58 (0.730) | coding (65/1140 nt) | gfcE | putative O‑antigen capsule outer membrane auxillary protein export channel | |||||
Only 100 of 103 total aligned reads displayed.
TCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTT > NC_000913/1045602‑1045800 | tCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGAGATc > 2:1095218/1‑100 (MQ=255) cataacattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtaccc < 2:1852842‑M1/2‑1 (MQ=255) cGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATcc > 2:729217/1‑100 (MQ=255) ggTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCt > 1:543108/1‑100 (MQ=255) ggTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCt > 2:2191227/1‑100 (MQ=255) ataacattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCt > 2:646347‑M1/98‑100 (MQ=255) taagattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCt > 1:1205357‑M1/97‑99 (MQ=255) taacattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagaatgtacCCtt < 2:286304‑M1/4‑1 (MQ=255) gTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCtt < 2:841655/100‑1 (MQ=255) tttGGCGCGCAACTGATCAATCAATCCTTGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTg < 1:846064/100‑1 (MQ=255) tttGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTg < 2:574694/100‑1 (MQ=255) tttGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTg < 1:1719915/100‑1 (MQ=255) aacattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTg > 1:594722‑M1/96‑100 (MQ=255) aacattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTg > 1:265642‑M1/96‑100 (MQ=255) acattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGt > 1:1001613‑M1/95‑100 (MQ=255) acattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGt < 2:1227536‑M1/6‑1 (MQ=255) cattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGtt < 1:497500‑M1/7‑1 (MQ=255) cattacattgactgataaatataaaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGtt > 1:1380640‑M1/94‑100 (MQ=255) ggCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTa > 2:1809894/1‑100 (MQ=255) gcgcgcAACTGATCAATCAATCCTGGCGTGACGGTATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTAc < 2:1034294/100‑1 (MQ=255) gcgcgcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTAc < 2:432635/100‑1 (MQ=255) gcgcgcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTAc < 2:1453656/100‑1 (MQ=255) cgcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTgg < 2:1250861/100‑1 (MQ=255) cgcAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTgg < 1:2191247/100‑1 (MQ=255) cAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTc < 2:281948/100‑1 (MQ=255) cAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTc < 1:2143369/100‑1 (MQ=255) aaCTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCTATGACATCCTTGTTACTGGTCg < 2:1384311/100‑1 (MQ=255) aaCTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCg > 1:15727/1‑100 (MQ=255) aCTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCCTTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGa > 2:1300035/1‑100 (MQ=255) aCTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGa > 2:1300084/1‑100 (MQ=255) cTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGAt > 2:2109951/1‑100 (MQ=255) caatcaatCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAAtt < 1:2131517/100‑1 (MQ=255) aatcaatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTc > 2:1517390/1‑100 (MQ=255) aatcaatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTc > 2:2109556/1‑100 (MQ=255) atcaatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCt > 1:1512462/1‑100 (MQ=255) tcaatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTg > 1:2078682/1‑100 (MQ=255) tcaatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTg < 1:380032/100‑1 (MQ=255) aatcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGAc > 2:1683441/1‑100 (MQ=255) atcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGAcc < 1:1818308/100‑1 (MQ=255) atcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGAcc < 2:1578071/100‑1 (MQ=255) tcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCa < 1:199593/100‑1 (MQ=255) tcCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCa < 1:853314/100‑1 (MQ=255) aaccaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAg > 2:85958‑M1/71‑100 (MQ=255) accaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTCCTGGTCGATTAATTCTGAccaag > 1:1616729‑M1/70‑98 (MQ=255) accaatgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTCCTGGTCGATAAATTCTGACCAgg > 2:1883621‑M1/70‑100 (MQ=255) tGGCGTGACGGGATAGATATTGACCAGTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACAGCCTTGTTACTGGTCGATAAATTCTGACCAgg < 2:126281/99‑1 (MQ=255) ggCGTGATGGGATAGATATTGACCATTTTGTCCAGGTTATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGa < 2:409279/99‑1 (MQ=255) atgaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTCCTGGTCGATAAATTCTGACCAGGAACa > 1:1129337‑M1/66‑100 (MQ=255) tGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAg > 2:1997022/1‑100 (MQ=255) gaaaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAg > 1:1014823‑M1/64‑100 (MQ=255) aaaaagaacattttgaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAgg > 1:2388490‑M1/63‑100 (MQ=255) aaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAggg > 2:51882‑M1/62‑100 (MQ=255) aaaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAggg > 1:1391454‑M1/62‑100 (MQ=255) aaagaacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGt > 2:570878‑M1/61‑100 (MQ=255) ggATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTAc > 2:840335/1‑100 (MQ=255) agaacatttgtaaggtttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAgg > 2:1802883‑M1/59‑96 (MQ=255) aacatttttaagttttcggtactgacattggctgttctgtctttgacagcatgtacCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACAt > 1:1551859‑M1/57‑100 (MQ=255) atatTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTg > 1:2201774/1‑100 (MQ=255) tatTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGt > 2:306712/1‑100 (MQ=255) tatTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGt > 1:1204829/1‑100 (MQ=255) tatTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGt < 1:2109968/100‑1 (MQ=255) ggccATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCaaa < 2:2207277/98‑1 (MQ=255) gACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCaaa < 2:1533263/100‑1 (MQ=255) gACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATACTTGTTAATGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTaaaa > 2:2078911/1‑100 (MQ=255) cATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGAc > 2:1200315/1‑100 (MQ=255) aTTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACa < 1:1592872/100‑1 (MQ=255) ttttGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAg < 2:466387/100‑1 (MQ=255) ccAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGc > 2:655979/1‑100 (MQ=255) cAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGcc < 1:2342717/100‑1 (MQ=255) ggTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCaa < 1:565826/100‑1 (MQ=255) ggTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCaa > 1:1250195/1‑100 (MQ=255) cATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGt > 2:259546/1‑100 (MQ=255) aTACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTc < 2:1920933/100‑1 (MQ=255) tACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCa > 1:966225/1‑100 (MQ=255) tACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCa > 1:966217/1‑100 (MQ=255) aCTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAg > 1:336709/1‑100 (MQ=255) aCTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAg > 1:157873/1‑100 (MQ=255) cTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGt > 2:2197912/1‑100 (MQ=255) gATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTAc < 2:2201754/100‑1 (MQ=255) gATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTAc < 1:1997039/100‑1 (MQ=255) gTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGaa > 2:689457/1‑100 (MQ=255) aGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAAc > 1:1190898/1‑100 (MQ=255) ttCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaa > 1:728149/1‑100 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaaa < 1:501527/100‑1 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaaa > 1:1934562/1‑100 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaaa > 1:952632/1‑100 (MQ=255) tCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTaaaaa > 1:1174274/1‑100 (MQ=255) cAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAAt > 2:1698702/1‑100 (MQ=255) cAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAAt > 1:1760577/1‑100 (MQ=255) cAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAAt > 1:1760629/1‑100 (MQ=255) aaTGACATCCTTGTTACTGGGCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATg > 2:1455086/1‑100 (MQ=255) aTGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGt > 2:685646/1‑100 (MQ=255) tGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGtt < 2:157872/100‑1 (MQ=255) gACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTc > 1:1240443/1‑100 (MQ=255) cATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCtt > 1:1242956/1‑100 (MQ=255) cATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCtt > 2:759162/1‑100 (MQ=255) aTCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCttt < 2:336707/100‑1 (MQ=255) CCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCttttt < 1:1304461‑M1/100‑1 (MQ=255) CCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCttttt > 1:1987297‑M1/1‑100 (MQ=255) CCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCtttt < 2:2320418‑M1/99‑1 (MQ=255) | TCGGTTTGGCGCGCAACTGATCAATCAATCCTGGCGTGACGGGATAGATATTGACCATTTTGTCCAGGTCATACTGATTGTCAGGTAGTTCAATGACATCCTTGTTACTGGTCGATAAATTCTGACCAGGAACAAGGGTACATGCTGTCAAAGACAGAACAGCCAATGTCAGTACCGAAAACTTAAAAATGTTCTTTTT > NC_000913/1045602‑1045800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |