BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1084781	NA (NA)	4 (0.050)	4/178	NT	NA	intergenic (+134/‑211)	efeB/phoH	deferrrochelatase, periplasmic/ATP‑binding protein; putative PhoH family P‑loop ATPase
*	?	NC_000913	= 4218520	NA (NA)	4 (0.050)	4/178	NT	NA	noncoding (85/132 nt)	REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP311 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 101 total aligned reads displayed.

CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTT  >  NC_000913/1084683‑1084880

ccTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatg                                                                                                    <  1:1422470/100‑1 (MQ=255)

ccTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatg                                                                                                    >  1:1715546/1‑100 (MQ=255)

ccTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatg                                                                                                    >  1:519352/1‑100 (MQ=255)

 cTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgc                                                                                                   <  1:91727/100‑1 (MQ=255)

 cTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgc                                                                                                   >  2:689233/1‑100 (MQ=255)

 cTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgc                                                                                                   <  1:542761/100‑1 (MQ=255)

  tGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgcc                                                                                                  <  1:1150440/100‑1 (MQ=255)

   gATGCGACGCTTGCGCGTCTTATCATGCCTACACTCAGTGCGGGTTTGGGAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatg                                                                                                    <  2:2006417/97‑1 (MQ=255)

   gATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgcct                                                                                                 >  1:164960/1‑100 (MQ=255)

        gACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgcctgatgc                                                                                            <  1:1137202/100‑1 (MQ=255)

        gACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCActgatgcctgatgc                                                                                            <  1:906184/100‑1 (MQ=255)

         aCGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCa                                                                                           <  1:891897/100‑1 (MQ=255)

              tGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATcc                                                                                      <  1:1043858/100‑1 (MQ=255)

                cgcgTCTTATCATGCCTACAATCAGTGCGGTTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctg                                                                                    >  1:167931/1‑100 (MQ=255)

                cgcgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctg                                                                                    <  2:208972/100‑1 (MQ=255)

                cgcgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctg                                                                                    <  1:42122/100‑1 (MQ=255)

                cgcgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctg                                                                                    <  2:378508/100‑1 (MQ=255)

                 gcgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctgc                                                                                   <  1:1953329/100‑1 (MQ=255)

                 gcgTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctgc                                                                                   <  1:1897400/100‑1 (MQ=255)

                   gTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCctgctg                                                                                 <  2:206698/100‑1 (MQ=255)

                       tATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAg                                                                             <  2:521809/100‑1 (MQ=255)

                       tATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAg                                                                             <  1:1713471/100‑1 (MQ=255)

                       tATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAg                                                                             <  1:1346323/100‑1 (MQ=255)

                        aTCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGc                                                                            <  2:2016350/100‑1 (MQ=255)

                        aTCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGc                                                                            <  1:929513/100‑1 (MQ=255)

                         tCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGGTCGTGCACTGATGCCTGATGCAAACCCTGCTGAAAGca                                                                           <  2:1468819/100‑1 (MQ=255)

                         tCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGca                                                                           <  2:1005206/100‑1 (MQ=255)

                          cATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcac                                                                          <  2:1058225/100‑1 (MQ=255)

                          cATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcac                                                                          <  1:440729/100‑1 (MQ=255)

                          cATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcac                                                                          >  2:825030/1‑100 (MQ=255)

                          cATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCATGCACTGATGCCTGATGCAAATCCTGCTGAAAGcac                                                                          >  1:2274573/1‑100 (MQ=255)

                            tGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacac                                                                        >  1:281132/1‑100 (MQ=255)

                             gCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGcacaca                                                                       >  1:2382051/1‑100 (MQ=255)

                              ccTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAg                                                                      <  1:871040/100‑1 (MQ=255)

                               cTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATtgtaggcatgataagacgcgcaagcgtcgcat                                                                     >  2:1022139‑M1/1‑68 (MQ=255)

                               cTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGc                                                                     <  2:1735373/100‑1 (MQ=255)

                                 aCAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCtt                                                                   >  2:279062/1‑100 (MQ=255)

                                  cAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATtgtaggcatgataagacgcgcaagcgtcgcatcag                                                                  >  1:1124513‑M1/1‑65 (MQ=255)

                                   aaTCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATtgtaggcatgataagacgcgcaagcgtcgcatcagg                                                                 >  1:1263978‑M1/1‑64 (MQ=255)

                                    aTCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATtgtaggcatgataagacgcgcaagcgtcgcatcaggc                                                                >  1:1066912‑M1/1‑63 (MQ=255)

                                    aTCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCttttt                                                                <  1:1410416/100‑1 (MQ=255)

                                     tCAGTGCGGGTTTGGTAGGCTGGCTAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTTATGCATGATGCAAATCCTGCTGAAAGCACACAGCttttt                                                                <  2:452353/99‑1 (MQ=255)

                                      cAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtc                                                              <  2:1683589/100‑1 (MQ=255)

                                        ntGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtcat                                                            >  2:305345/2‑100 (MQ=255)

                                         tGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtcatc                                                           <  1:354228/100‑1 (MQ=255)

                                         tGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtcatc                                                           <  1:2309394/100‑1 (MQ=255)

                                         tGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtcatc                                                           <  2:2222254/100‑1 (MQ=255)

                                         tGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTtcatc                                                           <  1:119610/100‑1 (MQ=255)

                                           cGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCAc                                                         <  2:1809827/100‑1 (MQ=255)

                                            gggTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACt                                                        >  1:1086060/1‑100 (MQ=255)

                                            gggTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACt                                                        >  1:1086083/1‑100 (MQ=255)

                                             ggTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTg                                                       <  1:35293/100‑1 (MQ=255)

                                             ggTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTg                                                       <  1:543962/100‑1 (MQ=255)

                                             ggTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCAGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTg                                                       >  2:1268465/1‑100 (MQ=255)

                                              gTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGt                                                      <  2:1742197/100‑1 (MQ=255)

                                              gTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGt                                                      >  1:1359896/1‑100 (MQ=255)

                                              gTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGt                                                      <  2:692845/100‑1 (MQ=255)

                                                  ggTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtcatc                                                  <  2:2139608/100‑1 (MQ=255)

                                                  ggTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtcatc                                                  <  1:73400/100‑1 (MQ=255)

                                                   gTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGtcatca                                                 >  2:2226653/1‑100 (MQ=255)

                                                      ggCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCTCTGTCATCAct                                               >  2:1858701/1‑99 (MQ=255)

                                                      ggCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCActc                                              >  1:1561855/1‑100 (MQ=255)

                                                      ggCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCActc                                              >  1:1324267/1‑100 (MQ=255)

                                                         tGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGt                                           >  2:1342069/1‑100 (MQ=255)

                                                          ggATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCCCTCTGTc                                          >  2:806603/1‑100 (MQ=255)

                                                          ggATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTc                                          <  1:236325/100‑1 (MQ=255)

                                                          ggATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTc                                          >  2:139461/1‑100 (MQ=255)

                                                           gATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCa                                         <  1:1892300/100‑1 (MQ=255)

                                                             tAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATc                                       >  1:1938078/1‑100 (MQ=255)

                                                             tAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATc                                       >  1:1296058/1‑100 (MQ=255)

                                                               aGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCtt                                     <  2:138594/100‑1 (MQ=255)

                                                                  cGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTcc                                  <  2:831077/100‑1 (MQ=255)

                                                                  cGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTcc                                  <  1:1629952/100‑1 (MQ=255)

                                                                  cGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTcc                                  >  2:1102008/1‑100 (MQ=255)

                                                                   gTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACGGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCa                                 <  1:1540394/100‑1 (MQ=255)

                                                                   acgatcgccggATGCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCa                                 >  2:843259/6‑100 (MQ=255)

                                                                   acgatcgccggATGCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCa                                 >  2:2044418/6‑100 (MQ=255)

                                                                    ttCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCan                                <  1:1078486/100‑2 (MQ=255)

                                                                     tCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAg                                <  2:2387646/99‑1 (MQ=255)

                                                                     tCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGt                               <  2:405485/100‑1 (MQ=255)

                                                                      cACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTa                              >  1:2225724/1‑100 (MQ=255)

                                                                        cgccgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGa                            >  1:360880/1‑100 (MQ=255)

                                                                          ccgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATGCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAg                                <  2:648943/94‑1 (MQ=255)

                                                                          ccgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGaaa                          >  1:1737003/1‑100 (MQ=255)

                                                                          ccgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGaaa                          >  1:789694/1‑100 (MQ=255)

                                                                           cgcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAAc                         <  1:276198/100‑1 (MQ=255)

                                                                            gcATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACt                        <  1:1216572/100‑1 (MQ=255)

                                                                               tCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAAt                     <  1:1398714/100‑1 (MQ=255)

                                                                                  ggCGATCGTGCACTGATGCCTGAAGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTc                  <  1:675205/100‑1 (MQ=255)

                                                                                    cGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAc                >  1:1834800/1‑100 (MQ=255)

                                                                                    cGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAc                <  1:986366/100‑1 (MQ=255)

                                                                                    cGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCAc                <  1:1359298/100‑1 (MQ=255)

                                                                                        cGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGaa            >  2:2179379/1‑100 (MQ=255)

                                                                                          ttccgatcttgtaggcatgataagacgcgcaagcgtcgcatcaggcatcgtgcaccgattgccggatgcggcgtgaacgccttatccggcctacagtcag          <  1:542618‑M1/92‑92 (MQ=255)

                                                                                          tGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAAt          >  1:37612/1‑100 (MQ=255)

                                                                                            cACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATgg        >  2:2004832/1‑100 (MQ=255)

                                                                                                gatgcctgatgcAAATCCTGCTGAAAGCACACAGCTTTTTTCATCTCTGTTATCACTCTGTCATCTTTCCAGTAGATACTAATGTCACTGAAATGGTGtt    >  2:562614/1‑100 (MQ=255)

                                                                                                gatgcctgatgcAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGtt    >  1:774945/1‑100 (MQ=255)

                                                                                                gatgcctgatgcAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGtt    >  2:193061/1‑100 (MQ=255)

                                                                                                  tgcctgatgcAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGtttt  <  1:2353281/100‑1 (MQ=255)

CCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAATCAGTGCGGGTTTGGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCGATCGTGCACTGATGCCTGATGCAAATCCTGCTGAAAGCACACAGCTTTTTTCATCACTGTCATCACTCTGTCATCTTTCCAGTAGAAACTAATGTCACTGAAATGGTGTTTT  >  NC_000913/1084683‑1084880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.