New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)25 (0.320) 16/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 117 total aligned reads displayed.

CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931
                                                                                                   |                                                                                                   
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  1:2165951‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:2121761‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:763323‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:747563‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:181470‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:1715136‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:1785470‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGAGTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:841031‑M1/100‑1 (MQ=255)
   cGACACCAATGTGGGCCTTCATGCCAAAGTGCCAATGATTGCCTTTCTTGGTCTGATGCATCTCCGGATAGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:1976940‑M1/1‑97 (MQ=255)
      cacCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccac                                                                                               >  1:1705705‑M1/1‑94 (MQ=255)
        ccAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccacca                                                                                             >  1:1000312‑M1/1‑92 (MQ=255)
           aTGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatca                                                                                          >  2:117000‑M1/1‑89 (MQ=255)
               gggCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattga                                                                                      >  2:563824‑M1/1‑85 (MQ=255)
                  ccTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggc                                                                                   >  2:1847061‑M1/1‑82 (MQ=255)
                       aTGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcaccca                                                                              >  1:2035955‑M1/1‑77 (MQ=255)
                              aGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgac                                                                       <  1:117001‑M1/100‑31 (MQ=255)
                               gTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacc                                                                      <  1:563826‑M1/100‑32 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  1:635087‑M1/100‑34 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCCCCGGATCGCGTTGCGGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  2:1408496‑M1/100‑34 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:671822‑M1/100‑35 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  2:1705692‑M1/100‑35 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:1847075‑M1/100‑35 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  1:486856‑M1/100‑36 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:1048299‑M1/99‑35 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTTCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  1:543556‑M1/99‑36 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  1:2112125‑M1/100‑37 (MQ=255)
                                     cTGATTGTCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTCCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:1829938‑M1/100‑38 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:1000308‑M1/100‑38 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:1923895‑M1/100‑38 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  1:2368820‑M1/100‑38 (MQ=255)
                                      tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaaca                                                               <  1:1588549‑M1/100‑39 (MQ=255)
                                                                                           ctgggtcgAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:407294‑M1/97‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:257857‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:900454‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:2302942‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1827845‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:2146287‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2349277‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:2303893‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:1392080‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:1434360‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:1591017‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2182697‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2316451‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:162242‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:162658‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:194454‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:1972543‑M1/100‑92 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1847917‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1072461‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1849106‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:166609‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1247826‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2060271‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:547757‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagt            <  1:1845458‑M1/97‑90 (MQ=255)
                                                                                            tgggtcGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1449745‑M1/98‑93 (MQ=255)
                                                                                            gtgggtgatgccaccatcgttggggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:1992583‑M1/7‑8 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:1005632‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:40204‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:830839‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:1365773‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  1:68075‑M1/100‑95 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:1778728‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:2312763‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  1:1513781‑M1/100‑95 (MQ=255)
                                                                                               ntcGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:66386‑M1/2‑5 (MQ=255)
                                                                                               gTCGAtggcacgatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggaaatgcatcagaccaagaaaggcaatcagtggcact      >  2:1249429‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtggcaccatcattgaggcacccagctcgaccaagaacaaagagcagaaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:545268‑M1/97‑93 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagctgcatcagaccaagaaaggcaatcagtggcact      >  2:346643‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:2129847‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1315754‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1114369‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:431301‑M1/1‑5 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     <  1:2356257‑M1/100‑97 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:1712839‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     <  1:200911‑M1/100‑97 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgtatcagaccaagaaaggcaatcagtggcacttt    >  1:2272608‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:18912‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:48739‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:2242206‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:368185‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:2121594‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcaccaagatcgaccaagaacaaagagcagcaacgcgatccggagatgcatccgaccaagaaaggaaatcagtggcacttt    >  2:691733‑M1/1‑3 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:981842‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1168501‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2059932‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:643600‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:463072‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1915209‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgagacacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1993888‑M1/100‑99 (MQ=255)
                                                                                                   atgccaccattattgaggcacccagcgcgaccaagaacaacaagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:427616‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatcgggagatgcatcagaccaagaaaggcaataagtggcactttcg  <  1:1614080‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:511129‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:1259929‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2282872‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1639000‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1657738‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:889219‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:861482‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.