New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2538614	NA (NA)	5 (0.060)	4/164	NT	NA	noncoding (80/98 nt)	RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 4470461	NA (NA)					noncoding (81/88 nt)	RIP339 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP339 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

AAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAC  >  NC_000913/2538515‑2538713                                                                                                    |                                                                                                    aaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGAT                                                                                                     <  1:1733974‑M1/100‑1 (MQ=255)  aaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATa                                                                                                    <  1:1404868/100‑1 (MQ=255)        gcgcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTa                                                                                              <  1:1741420/100‑1 (MQ=255)          gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAgc                                                                                            <  2:623428/100‑1 (MQ=255)          gcTTTGTTTATGCCGGAAGCGGCGTAAACGCGTTATGCGGCCTACAAAAGCGTGCTAATTCAATATATTGCAGAAACCTGGTAGGCCTGATAAGCGTAgc                                                                                            <  2:916865/100‑1 (MQ=17)               gTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATc                                                                                       <  1:273970/100‑1 (MQ=255)               gTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATAGATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATc                                                                                       <  2:1631638/100‑1 (MQ=255)                tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATACGCGTAGCGCATc                                                                                       >  2:2052332/1‑99 (MQ=255)                tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCa                                                                                      >  1:2291794/1‑100 (MQ=255)                tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCa                                                                                      >  1:21093/1‑100 (MQ=255)                tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCa                                                                                      <  2:843275/100‑1 (MQ=255)                tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCa                                                                                      >  1:2363019/1‑100 (MQ=255)                 ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                     >  1:425199/1‑100 (MQ=255)                  tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATgcgctacgcttatcagg                                                                                    <  1:2071749‑M1/100‑18 (MQ=255)                  tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATgcgctacgcttatcagg                                                                                    <  1:19609‑M1/100‑18 (MQ=255)                   aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATgcgctacgcttatcaggc                                                                                   <  1:100703‑M1/100‑19 (MQ=255)                   aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                   <  1:2136057/100‑1 (MQ=255)                     gCCGGATGCTGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATgcgctacgcttatcaggcct                                                                                 <  2:2195290‑M1/100‑21 (MQ=255)                     gCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTCGGCCTGATAAGCGTAGCGCATCAGGccg                                                                                 >  2:375281/1‑98 (MQ=255)                     gCCGGATGCGGCGTAAACGCCTTATCCGGCCAACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAg                                                                                 >  1:1989299/1‑100 (MQ=255)                      ccGGATCCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTCCTAATTCAATATATTACAGAAACCTTGTAGGCCTGATccgctacgcttatcaggcc                                                                                  <  2:1236485‑M1/98‑20 (MQ=255)                         gATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGtttt                                                                             <  1:1428080/100‑1 (MQ=255)                          aTGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTg                                                                            <  2:402978/100‑1 (MQ=255)                            gcggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTCTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTATGc                                                                           >  2:462966/1‑99 (MQ=255)                              ggggTAAACCCCTTAACCGGCCTACAAAACCGTACTCATTCAATATATTGCAGACACCCTGTAGGCCTGATAAGCGTAGCGCCTCAGGCAGTTTTTCGtt                                                                        >  2:1553787/4‑100 (MQ=17)                              ggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAgatcggaaga                                                                        >  1:460425/1‑91 (MQ=255)                              ggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGtt                                                                        <  1:46352/100‑1 (MQ=255)                                cgTAAACGCCATATCCGGCCTACAAAATCGTGCTAAGTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGtttc                                                                      <  2:2010823/100‑2 (MQ=255)                                  tAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtc                                                                    <  2:1158724/100‑1 (MQ=255)                                  tAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtc                                                                    <  2:383655/100‑1 (MQ=255)                                  ccgatctcTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtc                                                                    <  1:1591578/93‑1 (MQ=255)                                   aaaCGCCTTATCCGGCCTACAAAATCTTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGAATCAGGCAGtttttcc                                                                          <  2:210843/93‑4 (MQ=255)                                   aaaCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtca                                                                   <  2:1105927/100‑1 (MQ=255)                                   aaaCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtca                                                                   <  1:437730/100‑1 (MQ=255)                                   aaaCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtca                                                                   <  1:1457136/100‑1 (MQ=255)                                     aCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatc                                                                 <  1:1095722/100‑1 (MQ=255)                                     aCGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatc                                                                 >  1:1282767/1‑100 (MQ=255)                                      cGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATGGATTGCAGAAGCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatc                                                                 <  1:644498/99‑1 (MQ=255)                                      cGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcatca                                                                >  1:1126418/1‑100 (MQ=255)                                       gCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcat                                                                  <  2:229532/97‑1 (MQ=255)                                       gCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAg                                                               <  2:1168566/100‑1 (MQ=255)                                         cTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGtcagatcgg                                                             >  2:1591566/1‑94 (MQ=255)                                              ccGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGa                                                        <  1:753381/100‑1 (MQ=255)                                               cGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGAt                                                       <  2:195801/100‑1 (MQ=255)                                                 gCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGc                                                     <  1:2320904/100‑1 (MQ=255)                                                  ccTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGc                                                     <  1:826861/99‑1 (MQ=255)                                                   cTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTAGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTa                                                   >  2:1547326/1‑100 (MQ=255)                                                    tACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTAt                                                  <  2:652835/100‑1 (MQ=255)                                                     aCAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCCGTTTTGCGTTTGTCATCAGTCTCCGATGCt                                                    >  2:221809/1‑97 (MQ=255)                                                      cAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTAtt                                                 >  2:653100/1‑99 (MQ=255)                                                       aaaaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTaa                                               >  2:1383/1‑100 (MQ=255)                                                        aaaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAAt                                              <  2:200076/100‑1 (MQ=255)                                                        aaaTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAAt                                              <  2:2125706/100‑1 (MQ=255)                                                          aTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATcc                                            <  1:1474732/100‑1 (MQ=255)                                                          aTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATcc                                            >  1:425957/1‑100 (MQ=255)                                                          aTCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATcc                                            >  1:2361616/1‑100 (MQ=255)                                                             gTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTa                                         <  1:1948679/100‑1 (MQ=255)                                                             gTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTa                                         <  1:1948710/100‑1 (MQ=255)                                                             gTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTa                                         <  1:1096389/100‑1 (MQ=255)                                                              tGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                        >  2:2013114/1‑100 (MQ=255)                                                              tGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                        >  1:978023/1‑100 (MQ=255)                                                              tGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTaa                                        <  2:2088456/100‑1 (MQ=255)                                                                cTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAAt                                      >  1:42385/1‑100 (MQ=255)                                                                  aaTTCAATATATTTCAGAAACCTTGTAGGCCTGCTAAGCGTAGATCATCAGGCAGTTTTACGTTCGTCATCCATCTCCGATGCTATTAATCCTTCAATc                                     >  2:368524/1‑99 (MQ=21)                                                                    ttCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATcccc                                  <  2:769644/100‑1 (MQ=255)                                                                    ttCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTATACGATGCTATTAATCCTTCAATcc                                    >  2:2289674/1‑98 (MQ=255)                                                                     tCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCg                                 >  1:1355636/1‑100 (MQ=255)                                                                     tCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCg                                 >  1:1911570/1‑100 (MQ=255)                                                                     tCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGGTTATCATCAGTCTCCGATGCTATTAATCCATAAAAcc                                    >  2:700850/1‑97 (MQ=21)                                                                      cAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGc                                >  2:945312/1‑100 (MQ=255)                                                                       aaTATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcc                               >  1:2284871/1‑100 (MQ=255)                                                                       aaTATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcc                               <  2:1089795/100‑1 (MQ=255)                                                                       aaTATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcc                               <  1:716576/100‑1 (MQ=255)                                                                        atatatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGccc                              <  1:1910899/100‑1 (MQ=255)                                                                         tatatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGcccc                             <  2:1396695/100‑1 (MQ=255)                                                                          atatTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGccccc                            >  2:1091645/1‑100 (MQ=255)                                                                            atTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCt                           <  2:2087206/99‑1 (MQ=255)                                                                            atTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTg                          >  1:1386028/1‑100 (MQ=255)                                                                            atTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTg                          >  1:1812960/1‑100 (MQ=255)                                                                            atTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTg                          <  2:76572/100‑1 (MQ=255)                                                                             ttGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTgg                         >  1:1404144/1‑100 (MQ=255)                                                                              tGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGc                        <  2:1812945/100‑1 (MQ=255)                                                                              tGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGc                        <  2:2310057/100‑1 (MQ=255)                                                                               gCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCt                       >  1:911235/1‑100 (MQ=255)                                                                               gCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCt                       >  2:1422127/1‑100 (MQ=255)                                                                                cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTa                      >  2:1728852/1‑100 (MQ=255)                                                                                cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTa                      >  1:237542/1‑100 (MQ=255)                                                                                cAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTa                      >  1:342682/1‑100 (MQ=255)                                                                                  gAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTaaa                    >  1:224899/1‑100 (MQ=255)                                                                                     aCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATg                 <  2:1126413/100‑1 (MQ=255)                                                                                          gTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCtt            >  1:720266/1‑100 (MQ=255)                                                                                           tAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTc           >  1:350206/1‑100 (MQ=255)                                                                                             ggCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTACTCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTccc         >  2:69177/1‑100 (MQ=255)                                                                                              gCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTcccc        <  2:2291773/100‑1 (MQ=255)                                                                                               ccTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCa       >  1:2193492/1‑100 (MQ=255)                                                                                               ccTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCa       >  1:690117/1‑100 (MQ=255)                                                                                               ccTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCa       <  1:186238/100‑1 (MQ=255)                                                                                                  gATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAac    <  1:934360/100‑1 (MQ=255)                                                                                                    tAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTCTTAATCCTTAAATCCCCGCCCCCTGGCTAACCTGCTCTTCCCCAAaccc  >  2:560306/1‑98 (MQ=37)                                                                                                    |                                                                                                    AAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTCATCAGTCTCCGATGCTATTAATCCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACAC  >  NC_000913/2538515‑2538713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.