New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2714300 =	NA (NA)	4 (0.050)	4/162	NT	NA	noncoding (18/98 nt)	RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	4441401 =	NA (NA)					noncoding (9/98 nt)	RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP335 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

GGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTTT  >  NC_000913/2714201‑2714398                                                                                                    |                                                                                                   ggCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCtt                                                                                                    >  1:838389/1‑100 (MQ=255) ggCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCtt                                                                                                    >  1:838388/1‑100 (MQ=255)    gTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATc                                                                                                 <  2:386235/100‑1 (MQ=255)     tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                                >  1:1978604/1‑100 (MQ=255)     tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                                <  1:1341381/100‑1 (MQ=255)     tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                                <  1:1433799/100‑1 (MQ=255)      gCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                               <  2:474965/100‑1 (MQ=255)      gCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                               >  2:1915094/1‑100 (MQ=255)      gCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                               >  1:245969/1‑100 (MQ=255)        cACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                             <  1:1061968/100‑1 (MQ=255)         aCCTCAAACGACAGAAGAGTAATCTCAAGGCCAGGTTTAAGCCTGTGATTAAAAGTGCTTGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                               <  2:474649/97‑1 (MQ=37)         aCCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGcc                                                                                            <  2:838386/100‑1 (MQ=255)         aCCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGcc                                                                                            <  2:838387/100‑1 (MQ=255)          ccGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                           >  2:1581073/1‑100 (MQ=255)           cggaaaCGAGAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                             <  2:1505389/94‑1 (MQ=255)            gCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                           <  2:117164/98‑1 (MQ=255)            gCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                         >  2:1649709/1‑100 (MQ=255)             cAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                        <  2:861815/100‑1 (MQ=255)             cAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                        >  2:752079/1‑100 (MQ=255)                 cGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATGAGGCCTACGTgcc                                                                                    <  1:1620049/100‑3 (MQ=255)                 cGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGc                                                                                    <  1:2036554/100‑1 (MQ=255)                   aCAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTc                                                                                  >  1:1001666/1‑100 (MQ=255)                     agaagaGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCAt                                                                                >  1:2057872/1‑100 (MQ=255)                           gTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAata                                                                          >  2:1498676/1‑100 (MQ=255)                               tctcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATAtt                                                                      >  1:873557/1‑100 (MQ=255)                                tttaataccAGGCTTAAACCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTg                                                                     >  1:1878380/8‑100 (MQ=21)                                ctcCATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATAtt                                                                      <  1:67464/99‑1 (MQ=255)                                ccctacgCCAGATTCAAGCGTGTTATTAAAAGTGTTGGCAAACGCAAAACTGCCTGATGCGCTACTCTTATCAGGCCTACGTGGCTCATGCAATATATTg                                                                     <  2:1995286/94‑1 (MQ=18)                                  cAATGCCAGGTTTATGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATTCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGaa                                                                   >  2:1130760/1‑100 (MQ=255)                                  cAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGa                                                                    <  2:613937/99‑1 (MQ=255)                                   aaTGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAAt                                                                  >  1:1955510/1‑100 (MQ=255)                                   aaTGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAAt                                                                  <  1:480963/100‑1 (MQ=255)                                   aaTGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGCCTCATGCAATATATTGAAt                                                                  <  1:1788258/100‑1 (MQ=255)                                      gCCAGGTTTAAGCCTGGTATTAAAAGTGCTTGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTg                                                               <  1:1333346/100‑1 (MQ=255)                                      gCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTg                                                               <  1:119511/100‑1 (MQ=255)                                             ttAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATc                                                        >  1:372974/1‑100 (MQ=255)                                              tAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCt                                                       <  1:622751/100‑1 (MQ=255)                                               aaGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATTCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGCTCtt                                                      >  1:326592/1‑100 (MQ=255)                                               aaGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCtt                                                      >  1:1523760/1‑100 (MQ=255)                                                 gCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCCCATGCAATATATTGAATTTGCACGATCTTGt                                                    >  2:11971/1‑100 (MQ=255)                                                  ccTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCGCGATCTTGt                                                    <  2:2321212/99‑1 (MQ=255)                                                   cTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAg                                                  >  1:2358159/1‑100 (MQ=255)                                                   cTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAg                                                  >  2:255042/1‑100 (MQ=255)                                                     ggTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGc                                                >  2:200823/1‑100 (MQ=255)                                                     ggTATTAAAAGGGCTGGCAAACTCAAAACTGCCTGTTGTGTTACTCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAgg                                                 <  2:910596/99‑1 (MQ=18)                                                        atgaaaaGTGCTGGCAAGCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCAAGCAATATATTGAATTTGCACGATCTTGTAGGCCg                                              <  2:1043074/96‑1 (MQ=255)                                                        aTTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCgg                                             >  2:1076033/1‑100 (MQ=255)                                                         ttAAAAGTGCTGGCAAACGCAAACCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTCGGCCggc                                            >  1:1377490/1‑99 (MQ=255)                                                           aaaaGTGCTGGCAAACGCAAAACTGCCTGAAGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATa                                          <  1:173790/100‑1 (MQ=255)                                                              aGTGCTGGCAAACGCAAAACGGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAgg                                       <  2:1848540/100‑1 (MQ=255)                                                                  cTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGtt                                   <  2:17877/100‑1 (MQ=255)                                                                  cTGGCAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGtt                                   >  1:2243440/1‑100 (MQ=255)                                                                    ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTcn                                 <  2:108907/100‑2 (MQ=255)                                                                    ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                                 >  2:980330/1‑100 (MQ=255)                                                                    ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                                 >  2:554035/1‑100 (MQ=255)                                                                    ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                                 >  1:854634/1‑100 (MQ=255)                                                                    ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                                 >  1:1825408/1‑100 (MQ=255)                                                                      cAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCAcg                               >  1:1996141/1‑100 (MQ=255)                                                                         aCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCAcgccg                            <  1:1768379/100‑1 (MQ=255)                                                                          cGCAAAACTGCCTGATTCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTTAcgccgc                           >  2:350774/1‑100 (MQ=255)                                                                          cGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCAcgcag                            >  2:350883/1‑97 (MQ=255)                                                                               gtaggcctgataagcgtagcgCATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                      <  1:1229879‑M1/79‑1 (MQ=255)                                                                                aCTGCATAATCCGCTACGCTTATAAGCCCTACGTATTTCATGCAATATATAGAAATTGAACGATCTTGTAGTCCGGATAAGGCGTTCACGCCACATCCgg                     <  2:1287400/100‑1 (MQ=9)                                                                                 tcgCCTGATGCGCTACGCTTATCAGGCCTACGT‑CATATTGCAATTTATTGAATTTGCACGAACTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGcc                   <  1:821272/98‑2 (MQ=21)                                                                                 cTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                    <  1:452445/100‑1 (MQ=255)                                                                                  tttttGATGTGCTACGCTTATCATGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGc                    <  1:761860/95‑1 (MQ=17)                                                                                  ggcctgataagcgtagcgCATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                   <  2:332911‑M1/82‑1 (MQ=255)                                                                                   gcctgataagcgtagcgCATCAGGCCTACGTAGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                  <  2:885339‑M1/83‑1 (MQ=255)                                                                                   gCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                     <  2:2127843/97‑1 (MQ=255)                                                                                    cctgataagcgtagcgCATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                 <  2:1239818‑M1/84‑1 (MQ=255)                                                                                    ccTGATGCGTTACGCTTATCAGGCCAACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                 <  1:2146004/100‑1 (MQ=255)                                                                                     cTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                <  2:1307345/100‑1 (MQ=255)                                                                                     cTGATGCGCTACGCTTATCAGGCCTACATGGCCCATGCAATGTATTGAATTTGCACGCTTTTGTATGCCGGATGCGGCGTAAACGCCTTATCCGGcctac                <  1:2095204/100‑5 (MQ=17)                                                                                      tgatggtttACGCTTATCAGGCCTACGGGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                 <  1:622947/90‑1 (MQ=18)                                                                                      tgataagcgtagcgCATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa               <  1:220542‑M1/86‑1 (MQ=255)                                                                                      tGATGGGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCAGCATGaa               <  1:2237028/100‑1 (MQ=255)                                                                                      tGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCCCGCCGCATCCTGCATGaa               <  2:1138081/100‑1 (MQ=255)                                                                                      tGATGCGCTACGCTTATCAGGCATACGTGGCTCATGCAATATATTGAATTTGCACGAGCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                <  2:2164571/99‑1 (MQ=255)                                                                                          gcgcTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGCTCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATaa            >  2:647758/1‑99 (MQ=255)                                                                                            gcTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgc         >  1:1271358/1‑100 (MQ=255)                                                                                            gcTACGCTGATCAGGCCTACGTAGATCAAGCAATAAATGGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgc         <  1:1169307/100‑1 (MQ=17)                                                                                            gatctgCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgc         <  1:2014673/95‑1 (MQ=255)                                                                                              tACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgcgc       >  1:1402371/1‑100 (MQ=255)                                                                                              tACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgc         <  1:1246306/98‑1 (MQ=255)                                                                                                cGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCAc     >  2:1377910/1‑100 (MQ=255)                                                                                                 gCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAgcagatc    >  2:2014655/1‑95 (MQ=255)                                                                                                  cTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACtt   >  2:1590986/1‑100 (MQ=255)                                                                                                  cTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACtt   >  1:170809/1‑100 (MQ=255)                                                                                                   ttATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACttt  >  1:466132/1‑100 (MQ=255)                                                                                                    |                                                                                                   GGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTTT  >  NC_000913/2714201‑2714398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.