BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3525557	NA (NA)	8 (0.100)	6/164	NT	NA	noncoding (80/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 3525568	NA (NA)	8 (0.100)	6/164	NT	NA	noncoding (91/98 nt)	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 111 total aligned reads displayed.

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667

cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     <  1:626755/100‑1 (MQ=255)

cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     <  1:2198081/100‑1 (MQ=255)

 ttGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCa                                                                                                    >  1:535283‑M2/1‑99 (MQ=255)

  tGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCat                                                                                                   >  2:40028‑M2/1‑98 (MQ=255)

   gTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCat                                                                                                   <  2:263264‑M2/99‑3 (MQ=255)

    tttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatca                                                                                                 <  1:887620‑M2/100‑5 (MQ=255)

       aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                              >  2:755734‑M2/1‑93 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTTAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggct                                                                                             >  1:1135141‑M2/1‑92 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             >  1:1372729/1‑100 (MQ=255)

        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             <  1:1518989/100‑1 (MQ=255)

         gCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                                                                            >  1:121397/1‑100 (MQ=255)

          ccGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaaa                                                                                           >  1:2327152/1‑100 (MQ=255)

           cGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttat                                                                                          >  1:1376002‑M2/1‑89 (MQ=255)

           cGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAc                                                                                          <  1:216388/100‑1 (MQ=255)

              aTACGGCGTGAACGATTTATCCGGATAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATACGCCTGATACACATTGTGCACCAGGCa                                                                                             <  2:2123196/94‑1 (MQ=255)

               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgggg                                                                                      >  1:242457‑M2/1‑85 (MQ=255)

               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgggg                                                                                      >  1:647647‑M2/1‑85 (MQ=255)

               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgggg                                                                                      >  1:2388554‑M2/1‑85 (MQ=255)

               tACGGCGTGAACGCCTTATCCGGATAACAAAATCGTAAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAc                                                                                          <  2:1491501/96‑1 (MQ=255)

                aCGGCGTGCACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                        >  2:2292168‑M2/1‑84 (MQ=255)

                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                                                                                    <  2:336074/100‑1 (MQ=255)

                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  1:40955/1‑100 (MQ=255)

                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  2:1206714/1‑100 (MQ=255)

                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  1:2356138/1‑100 (MQ=255)

                   gCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCa                                                                                  <  2:1484491/100‑1 (MQ=255)

                   gCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGAGAAACATTGTGCATCAGGCAAACTTCACGCa                                                                                  >  1:1956401/1‑100 (MQ=255)

                    ngTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAt                                                                                 >  1:1947226/2‑100 (MQ=255)

                    cGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAt                                                                                 >  2:787098/1‑100 (MQ=255)

                     gtaaaCGCGTTATCCGGCCAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACACAGTGCACCAAGCAAACTTCACGCAtt                                                                                <  2:2264392/97‑1 (MQ=38)

                      tGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAttt                                                                               <  1:2168954/100‑1 (MQ=255)

                           gcgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACt                                                                          <  2:234407/100‑1 (MQ=255)

                            cgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTc                                                                         >  1:812579/1‑100 (MQ=255)

                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                      <  2:1789217/100‑1 (MQ=255)

                                 tCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcccc                                                                    <  1:609909/100‑1 (MQ=255)

                                     gCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGcc                                                                <  1:2039332/100‑1 (MQ=255)

                                     gCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGcc                                                                <  2:575878/100‑1 (MQ=255)

                                      cTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGccc                                                               >  1:148421/1‑100 (MQ=255)

                                       tAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCt                                                              <  1:1652373/100‑1 (MQ=255)

                                        aaCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCtt                                                             >  2:1985497/1‑100 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  2:1444390/1‑100 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           <  2:148420/100‑1 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  1:1095229/1‑100 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  1:1586502/1‑100 (MQ=255)

                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           <  1:1659445/100‑1 (MQ=255)

                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  1:511506/100‑1 (MQ=255)

                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  2:1535595/100‑1 (MQ=255)

                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  1:1875785/100‑1 (MQ=255)

                                            aaaTCGTGAAAACTCAATAAATTGCAGACACCCCATAGACCTGATAAACATTGTTCAGCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  2:1299445/99‑1 (MQ=255)

                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        <  2:235803/100‑1 (MQ=255)

                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        <  2:560303/100‑1 (MQ=255)

                                             aaTCGTGAAAACTCAATAAACTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        <  1:406787/100‑1 (MQ=255)

                                              aTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAcc                                                       >  2:2358561/1‑100 (MQ=255)

                                                     aaccTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAACCTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcgc                                                 <  2:1864266/96‑1 (MQ=255)

                                                      aaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCgcgc                                               <  1:2260229/100‑1 (MQ=255)

                                                      aaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCgcgc                                               <  1:2260267/100‑1 (MQ=255)

                                                        cTCAATAAATTGGAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCAc                                             >  1:1562959/1‑100 (MQ=255)

                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCAc                                             <  1:1382908/100‑1 (MQ=255)

                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCAc                                             >  2:1130752/1‑100 (MQ=255)

                                                         tCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccg                                               >  2:340100‑M2/1‑43 (MQ=255)

                                                          cAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCAc                                             >  2:1158413/1‑98 (MQ=255)

                                                             tAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAgg                                         <  1:1158419/99‑1 (MQ=255)

                                                              aaaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGaa                                       <  2:526150/100‑1 (MQ=255)

                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAAc                                      >  2:2005694/1‑100 (MQ=255)

                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAAc                                      >  1:174858/1‑100 (MQ=255)

                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAAc                                      >  2:572887/1‑100 (MQ=255)

                                                                aTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACa                                     >  1:1508277/1‑100 (MQ=255)

                                                                   gCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcg                                  >  1:1542419/1‑100 (MQ=255)

                                                                   gCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcg                                  >  1:1760644/1‑100 (MQ=255)

                                                                   gCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgc                                   >  2:661097/1‑99 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 <  1:111832/100‑1 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 >  1:1788324/1‑100 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 >  2:1548304/1‑100 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 <  2:1225567/100‑1 (MQ=255)

                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 >  1:2256265/1‑100 (MQ=255)

                                                                     aGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCa                                >  1:2327959/1‑100 (MQ=255)

                                                                      gAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCAc                               <  1:1869317/100‑1 (MQ=255)

                                                                        aaCCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTg                             <  2:1339308/100‑1 (MQ=255)

                                                                          tctcttctgCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGAc                           <  2:1636149/92‑1 (MQ=255)

                                                                          ccccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGAc                           >  2:1160314/1‑100 (MQ=255)

                                                                          ccccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGAc                           <  1:228037/100‑1 (MQ=255)

                                                                              aTAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:482255/100‑1 (MQ=255)

                                                                              aTAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:469107/100‑1 (MQ=255)

                                                                              aTAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:765749/100‑1 (MQ=255)

                                                                               tAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       >  2:2085971/1‑99 (MQ=255)

                                                                                aaGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcg                     <  1:1342979/100‑1 (MQ=255)

                                                                                  gCCTGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatccggcat                   <  1:2307770‑M2/100‑83 (MQ=255)

                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCGACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcg                   >  2:1679359/1‑100 (MQ=255)

                                                                                    cTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGCGGAACAGCGCACTGACATTGCGCGCt                 >  2:1021361/1‑100 (MQ=255)

                                                                                     tGATAAACATTGTTCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcgc                  <  1:123644/98‑1 (MQ=255)

                                                                                     tGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCtt                <  1:654056/100‑1 (MQ=255)

                                                                                      gATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTc               <  2:1120764/100‑1 (MQ=255)

                                                                                      gATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCAATGTCAGTgcgctgttc               <  1:1836845/100‑6 (MQ=255)

                                                                                       aTAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCa              <  2:2112097/100‑1 (MQ=255)

                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTGGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt             >  2:2035191/1‑100 (MQ=255)

                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt             >  2:2333090/1‑100 (MQ=255)

                                                                                             aTTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAg        <  1:572889/100‑1 (MQ=255)

                                                                                                gtgCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCa     >  1:1446691/1‑100 (MQ=255)

                                                                                                  gCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAgg   <  2:431896/100‑1 (MQ=255)

                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  2:1956385/100‑1 (MQ=255)

                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  >  2:853093/1‑100 (MQ=255)

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.