New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620057 =	NA (NA)	12 (0.150)	7/166	NT	100%	coding (866/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620067 =	0 (0.000)					coding (876/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAAC  >  NC_000913/3619969‑3620155                                                                                                   |                                                                                         ttcgccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTg                                                                                         <  1:1805355‑M2/2‑1 (MQ=255)   cgccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGcc                                                                                       >  1:1425371‑M2/97‑100 (MQ=255)   cgccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGcc                                                                                       >  2:198107‑M2/97‑100 (MQ=255)   cgccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGcc                                                                                       >  1:2186113‑M2/97‑100 (MQ=255)    gccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGCCg                                                                                      <  1:2111476‑M2/5‑1 (MQ=255)     ccgcgtggcgtccagccatagcgccccagcggcgcggcaggtaaattctccgggtattccgggtagtgcgtcagccacacggcagacagacggaTGCCgt                                                                                     <  2:719300‑M2/6‑1 (MQ=255)     ccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGCCgt                                                                                     <  2:1917607‑M2/6‑1 (MQ=255)     ccgcgtggcgtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGCCgt                                                                                     <  1:621164‑M2/6‑1 (MQ=255)         gtggcgtccagccatcgcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggaTGCCgt                                                                                     <  2:1382977‑M2/6‑1 (MQ=255)              gtccagccatagcgcaccagcggcgcggcaggtaaattctccgggtattccgggtcgtgcgtcagcatcccggcagacagacggaTGccgat                                                                                    >  2:2075742‑M2/86‑90 (MQ=255)                                                               ccgggtcgtgcgtcagccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTgcgc                           >  1:2175137‑M2/37‑100 (MQ=255)                                                                             agccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGcc             >  1:851735‑M2/23‑100 (MQ=255)                                                                              gccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACgccc            >  2:2106025‑M2/22‑99 (MQ=255)                                                                              gccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCa            >  1:46534‑M2/22‑100 (MQ=255)                                                                              gccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCa            >  1:880927‑M2/22‑100 (MQ=255)                                                                               ccacacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCa            >  2:2278585‑M2/21‑99 (MQ=255)                                                                                aCAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACG          <  2:337381‑M2/100‑1 (MQ=255)                                                                                 taacGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC         >  2:149992‑M2/2‑100 (MQ=255)                                                                                 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC         <  1:1998957‑M2/100‑1 (MQ=255)                                                                                 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC         <  2:2031117‑M2/100‑1 (MQ=255)                                                                                 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC         <  1:1334146‑M2/100‑1 (MQ=255)                                                                                 acacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCcgc         >  1:1976819‑M2/19‑100 (MQ=255)                                                                                 acacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAcgc         >  1:2029168‑M2/19‑100 (MQ=255)                                                                                  cacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCcgcg        >  1:272590‑M2/18‑100 (MQ=255)                                                                                  cacggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAcgcg        >  1:1515879‑M2/18‑100 (MQ=255)                                                                                  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCa        <  1:149993‑M2/100‑2 (MQ=255)                                                                                  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG        >  1:2183543‑M2/1‑100 (MQ=255)                                                                                    cggcagacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGCGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAcgcg        >  1:123043‑M2/16‑98 (MQ=255)                                                                                        agacagacggaTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAAc  <  2:272588‑M2/89‑1 (MQ=255)                                                                                                   |                                                                                         CGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAAC  >  NC_000913/3619969‑3620155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.