New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4629147	61 (0.710)	7 (0.090)	5/168	NT	10.7%	coding (1376/1668 nt)	ettA	energy‑dependent translational throttle A
	?	NC_000913	= 4629161	59 (0.730)					coding (1362/1668 nt)	ettA	energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

GGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGC  >  NC_000913/4629064‑4629257                                                                                                  |                                                                                                 gggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtg                                                                                                >  2:777903‑M2/1‑98 (MQ=255) gggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtg                                                                                                <  2:1887703‑M2/100‑3 (MQ=255)  ggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgc                                                                                               >  2:103685‑M2/1‑97 (MQ=255)  ggCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgc                                                                                               >  2:1725726‑M2/1‑97 (MQ=255)    cGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgcag                                                                                             <  1:1050437‑M2/100‑6 (MQ=255)       tttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgacg                                                                                          <  1:2322943/100‑1 (MQ=255)        ttCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgacga                                                                                         >  1:85775/1‑100 (MQ=255)         tCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAgacgac                                                                                        >  1:248032/1‑100 (MQ=255)          ccAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGAcc                                                                                       >  1:711377/1‑100 (MQ=255)           cAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACcg                                                                                      <  2:1064896/100‑1 (MQ=255)                   ttccgatctCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTcacc                                                                              <  2:2072037/92‑1 (MQ=255)                      gggTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCaccacc                                                                           <  2:724666/100‑1 (MQ=255)                        gTTTCGATATCCAGGTCGTTGGTTGGGTCGTCGATCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCgg                                                                         <  1:1716622/100‑1 (MQ=255)                          ttCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGgag                                                                       >  2:10196/1‑100 (MQ=255)                            cGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTcaccagatcggaa                                                                     >  1:2072055/1‑92 (MQ=255)                             gATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGt                                                                    <  1:1322267/100‑1 (MQ=255)                             gATATCCAGGTCGTTGGTTGGTTCGGCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGt                                                                    <  1:822780/100‑1 (MQ=255)                              atatCCAGGTCGTTGGTTGGGTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGt                                                                    <  2:37748/99‑1 (MQ=255)                                 tCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCAGAGAGTTCAc                                                                >  2:1153976/1‑100 (MQ=255)                                 tCCAGGTCGTCGGTTCGTTCGTCGAGCAGTCGCGTGCTGCCGCCACCCTGCATCAGCTTCGTCAGATGCAGGCGACCGCGCTCACCACCGGAGAGTTctc                                                                <  2:1520405/100‑3 (MQ=255)                                  ccAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCAcc                                                               >  1:2143846/1‑100 (MQ=255)                                    aGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCaa                                                             <  2:2040095/100‑1 (MQ=255)                                        cGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg                                                         >  1:1778525/1‑100 (MQ=255)                                           tggttggtTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGttt                                                      >  1:1399242/1‑100 (MQ=255)                                            ggttggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCTGAGAGTTCACCAACGCGTTTa                                                     <  1:1790774/100‑1 (MQ=255)                                              ttggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAcc                                                   <  2:742849/100‑1 (MQ=255)                                               tggttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAccc                                                  >  1:839977/1‑100 (MQ=255)                                                 gttCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTg                                                >  2:441072/1‑100 (MQ=255)                                                    cgtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATc                                             <  2:1149272/100‑1 (MQ=255)                                                    cgtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATc                                             <  1:596932/100‑1 (MQ=255)                                                     gtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCa                                            <  2:119014/100‑1 (MQ=255)                                                     gtcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCa                                            <  2:1519654/100‑1 (MQ=255)                                                      tcgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCaa                                           >  2:937573/1‑100 (MQ=255)                                                       gaagctgctgcAGGTTGGCGCCAACATGCTGCTGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGCGCGCACCCACGGGTATACCCTGACCacc                                          >  2:2106705/3‑98 (MQ=12)                                                       cgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAc                                          >  1:2082028/1‑100 (MQ=255)                                                       cgAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAc                                          >  1:2374866/1‑100 (MQ=255)                                                        gAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAcc                                         >  1:1676757/1‑100 (MQ=255)                                                           cagcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCt                                      <  1:2151959/100‑1 (MQ=255)                                                            agcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt                                     <  1:1053153/100‑1 (MQ=255)                                                            agcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt                                     >  1:497368/1‑100 (MQ=255)                                                            agcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt                                     <  2:2270683/100‑1 (MQ=255)                                                             gcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaacc                                    <  1:860341‑M2/100‑63 (MQ=255)                                                             gcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTGCACCAACGCGTTTACCCTGATCAACCCCttt                                    >  2:609117/1‑100 (MQ=255)                                                                gcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaa                                 >  1:1851336/1‑100 (MQ=255)                                                                 caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                                <  1:1924175/100‑1 (MQ=255)                                                                 caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                                <  2:1796339/100‑1 (MQ=255)                                                                 caTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag                                <  1:1220152/100‑1 (MQ=255)                                                                    gTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagtta                             >  1:1664367/1‑100 (MQ=255)                                                                    gTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagtta                             >  2:36407/1‑100 (MQ=255)                                                                     ttGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaa                            >  2:1103469/1‑100 (MQ=255)                                                                       gccgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaaag                          >  1:59917/1‑100 (MQ=255)                                                                       gccgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaaa                           >  2:905532/1‑99 (MQ=255)                                                                         cgccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctg                        <  1:1361682‑M2/100‑75 (MQ=255)                                                                         cgccAACCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctg                        <  1:1955275‑M2/100‑75 (MQ=255)                                                                         cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCg                        >  2:1213212/1‑100 (MQ=255)                                                                           ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc                      <  2:1399234/100‑1 (MQ=255)                                                                           ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc                      >  1:288316/1‑100 (MQ=255)                                                                             aaCCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaa                    <  1:689655‑M2/100‑79 (MQ=255)                                                                              aCCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggcaaa                   <  1:1396506‑M2/100‑80 (MQ=255)                                                                              aCCTGCAGCAGCTTCGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaa                   <  2:469955‑M2/100‑80 (MQ=255)                                                                               ccTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc                      <  2:2256526/96‑1 (MQ=255)                                                                                 tGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGt                <  2:1716809/100‑1 (MQ=255)                                                                                 tGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGt                >  2:2303130/1‑100 (MQ=255)                                                                                    agcagcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAgg             >  2:2137726/1‑100 (MQ=255)                                                                                    agcagcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAgg             <  1:898841/100‑1 (MQ=255)                                                                                     gcagcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAgg             >  2:788062/1‑99 (MQ=255)                                                                                      cagcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGgcg           >  2:1069176/1‑100 (MQ=255)                                                                                        gcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGcgcg         <  1:837470/100‑1 (MQ=255)                                                                                           tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGTGGCCAACGTAGGCGCGGc       <  1:1156394/99‑1 (MQ=255)                                                                                           tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCt      >  2:1372333/1‑100 (MQ=255)                                                                                           tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCt      >  1:81088/1‑100 (MQ=255)                                                                                            cGCCAGAtgcaggttggcggcaacatgctgctgctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgccctgctggag      >  1:469957‑M2/1‑7 (MQ=255)                                                                                             gCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTg    >  1:2196294/1‑100 (MQ=255)                                                                                             gCCAGACGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTg    >  2:1642768/1‑100 (MQ=255)                                                                                              ccAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTgg   <  1:1473002/100‑1 (MQ=255)                                                                                              ccAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTgg   <  1:804447/100‑1 (MQ=255)                                                                                              ccAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTgg   <  2:129042/100‑1 (MQ=255)                                                                                              ccAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTgg   <  1:937575/100‑1 (MQ=255)                                                                                               cAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGc  <  1:1004129/100‑1 (MQ=255)                                                                                                  |                                                                                                 GGGCGTTTTCCAGCGCGCGCAGGGTTTCGATATCCAGGTCGTTGGTTGGTTCGTCGAGCAGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGC  >  NC_000913/4629064‑4629257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.