New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	72136 =	NA (NA)	6 (0.080)	4/164	NT	NA	noncoding (1/85 nt)	REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913	411111 =	NA (NA)					noncoding (34/191 nt)	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences

GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAG  >  NC_000913/411012‑411210                                                                                                    |                                                                                                       gcggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                        <  2:1162614/100‑1 (MQ=255)     cgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                    <  1:1205750/100‑1 (MQ=255)     cgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                    <  2:1464951/100‑1 (MQ=255)       tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa                                                                                                  <  2:2261479/100‑1 (MQ=255)        aCGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa‑a                                                                                                >  2:1783103/1‑100 (MQ=255)            ggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTg                                                                                            <  2:509647/100‑1 (MQ=255)             gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGc                                                                                           <  1:1909647/100‑1 (MQ=255)             gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGc                                                                                           <  1:2085066/100‑1 (MQ=255)              cgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGcc                                                                                          <  1:779927/100‑1 (MQ=255)                    gTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAAcc                                                                                    <  2:888941/100‑1 (MQ=255)                    gTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAAc                                                                                     <  2:1592850/99‑1 (MQ=255)                     tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCg                                                                                   <  1:1500238/100‑1 (MQ=255)                      ggTTATGGCCACACGAGTAAAACACGTTGGCCCTTGCCCCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGt                                                                                  <  2:2022711/100‑1 (MQ=18)                      ggTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGt                                                                                  >  2:4533/1‑100 (MQ=255)                      ggTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGGGCCAGAACCg                                                                                   >  2:213370/1‑99 (MQ=255)                      ggTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCAGCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGt                                                                                  <  2:479751/100‑1 (MQ=255)                       gTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTa                                                                                 >  1:1059010/1‑100 (MQ=255)                        taaTGGCCACAAGAGTAAAAAACGTAGGCAACTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAg                                                                                <  1:1506442/98‑1 (MQ=255)                         tATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAgg                                                                               >  2:48369/1‑100 (MQ=255)                          aTGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGc                                                                              >  1:1559362/1‑100 (MQ=255)                             gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCgg                                                                           >  1:813129/1‑100 (MQ=255)                             gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCgg                                                                           <  1:59622/100‑1 (MQ=255)                              ccACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCgg                                                                           >  2:953925/1‑99 (MQ=255)                               cacaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGAt                                                                         >  2:1193600/1‑100 (MQ=255)                               cacaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGAt                                                                         >  1:938221/1‑100 (MQ=255)                               cacaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGAt                                                                         <  1:1984722/100‑1 (MQ=255)                                acaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGAt                                                                         <  2:2220667/99‑1 (MQ=255)                                   agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAgg                                                                     <  2:864339/100‑1 (MQ=255)                                    gagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAgg                                                                     >  2:1224809/1‑99 (MQ=255)                                      gTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑Gt                                                                 <  2:2229278/100‑1 (MQ=255)                                        aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTc                                                               >  1:985774/1‑100 (MQ=255)                                        aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTc                                                               >  1:91634/1‑100 (MQ=255)                                        aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTc                                                               >  1:267706/1‑100 (MQ=255)                                        aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCGTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTc                                                               >  1:477327/1‑100 (MQ=255)                                         aaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCa                                                              >  1:807839/1‑100 (MQ=255)                                         aaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCa                                                              <  1:151819/100‑1 (MQ=255)                                           aaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cg                                                           <  2:141084/100‑1 (MQ=255)                                            aaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cgc                                                          >  1:1717518/1‑100 (MQ=255)                                             aCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cgcc                                                         <  1:37365/100‑1 (MQ=255)                                              cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cgccg                                                        >  1:1794119/1‑100 (MQ=255)                                              cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cgcc                                                         <  2:800711/99‑1 (MQ=255)                                               gTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑cgccgc                                                       >  1:508862/1‑100 (MQ=255)                                                tAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCa                                                      <  1:64408/100‑1 (MQ=255)                                                  ggCAATTGGCGCATCATGCCTGCTGCGACGCCTGCCGCGTCTTATCACGCCTCCAAA‑CGCTGCCAGCACCGTAGCCCGGATACGGC‑gaacac                                                             >  2:1611353/1‑87 (MQ=21)                                                  ggCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATc                                                    >  1:183740/1‑100 (MQ=255)                                                      aTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGc                                                <  1:1564458/100‑1 (MQ=255)                                                      aTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGc                                                <  1:1511305/100‑1 (MQ=255)                                                         ggCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAAt                                             <  1:1575341/100‑1 (MQ=255)                                                           cgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATaa                                           <  2:470902/100‑1 (MQ=255)                                                                 atGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCCTCCGGCAATAAGTg                                        >  2:637979/1‑97 (MQ=255)                                                                  tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCGAGAACCGTAGGCCGGATAAGGC‑GTGCA‑CGCCGCATCCGGCAATAAGTGCTcc                                    <  2:1741819/100‑1 (MQ=255)                                                                  tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTcc                                    <  1:100780/100‑1 (MQ=255)                                                                  ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTcc                                    >  1:172076‑M2/35‑100 (MQ=255)                                                                  ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTcc                                    >  2:1231974‑M2/35‑100 (MQ=255)                                                                  ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTcc                                    >  1:1513821‑M2/35‑100 (MQ=255)                                                                   gcctgataagacgcggcaagcgtcgcatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCg                                   >  1:40676‑M2/34‑100 (MQ=255)                                                                   gCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCg                                   >  1:1251355/1‑100 (MQ=255)                                                                   gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCg                                   <  2:2067380/100‑1 (MQ=255)                                                                   gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCg                                   <  1:74409/100‑1 (MQ=255)                                                                    cctgataagacgcggcaagcgtcgcatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGa                                  >  1:836240‑M2/33‑100 (MQ=255)                                                                    ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGCATAAGGA‑GAACA‑CGCCGCATCCGGCGAAAAGTGCTCCGa                                  >  2:1984052/1‑100 (MQ=18)                                                                      tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATg                                >  2:105205/1‑100 (MQ=255)                                                                      tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATg                                >  1:2208631/1‑100 (MQ=255)                                                                      tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATg                                >  1:1631867/1‑100 (MQ=255)                                                                      tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATg                                >  1:1154016/1‑100 (MQ=255)                                                                       gATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATg                                >  2:541298/1‑99 (MQ=255)                                                                       gATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGCATAAGGC‑GTGCA‑CGCCCCATCCGGCAATAAGTGCTACGa                                  >  2:2358096/1‑97 (MQ=17)                                                                        aTGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGcc                              >  1:1380013/1‑100 (MQ=255)                                                                           cGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGTCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                           >  1:1662583/1‑100 (MQ=255)                                                                           cGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                           >  1:1000974/1‑100 (MQ=255)                                                                            gACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGAt                          >  2:1790069/1‑100 (MQ=255)                                                                             aCGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATg                         <  1:211244/100‑1 (MQ=255)                                                                             aCGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATg                         >  1:481455/1‑100 (MQ=255)                                                                              cGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATg                         <  2:2123255/99‑1 (MQ=255)                                                                              cGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        >  1:1132708/1‑100 (MQ=255)                                                                              cGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        <  1:1558085/100‑1 (MQ=255)                                                                               gCTTGCCGCGGCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCg                       <  2:2195563/100‑1 (MQ=255)                                                                                cggcaagcgtcacatcaggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATg                         >  1:768231‑M2/21‑97 (MQ=255)                                                                                  tGCCGCGTCTTATCAGGCCTACAAA‑AGGTACCTGCACCGTAGGCGGGATAATAC‑GCTTA‑CGGTGCGTCCGGCGATATGTGCTCAGAGGCTGGATGc                        >  2:1648672/1‑96 (MQ=9)                                                                                   gCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGTCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGCGCTCCGATACCCGAAGCGa                      >  2:284380/1‑97 (MQ=18)                                                                                     cgcgTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCtt                 >  1:636180/1‑100 (MQ=255)                                                                                        gTCTTATCCGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGcc              <  1:213371/100‑1 (MQ=255)                                                                                        gTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGcc              <  1:4533/100‑1 (MQ=255)                                                                                         tCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg             >  1:2013387/1‑100 (MQ=255)                                                                                            tATCAGGCCTACAAACTTGTGCCTGAACCGTAGGCCGGATAAGACGGGTAAGCGTCGCATCAGGCAAT‑GGTGCTCGGATGCCGGATgcggcgtgaacgcc            >  1:675039/1‑92 (MQ=11)                                                                                            tATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt          >  1:1913339/1‑100 (MQ=255)                                                                                            tATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt          >  1:1086767/1‑100 (MQ=255)                                                                                             atcaggcCTACAAA‑AGGTGCCAGAACCGTAGCCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGACGCGACGCTTGCcgcg           >  2:631390‑M2/8‑98 (MQ=255)                                                                                             ataaggcCCACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GGTCA‑CTCCGCATCCAGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTc         <  2:777534‑M2/93‑1 (MQ=255)                                                                                               caggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGc               >  2:1122362‑M2/6‑92 (MQ=255)                                                                                               caggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgcg           <  2:1290176‑M2/91‑1 (MQ=255)                                                                                               caggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCtt       >  2:444873‑M2/6‑100 (MQ=255)                                                                                               caggcCTACAAA‑AGGTGCCAGAACCGTAGGCCCGATACGTC‑GTTCA‑CGCCGCATCCGGCAATAAGCGCTACGATGCATGACGCGACGCTTGc               >  2:2260064‑M2/6‑92 (MQ=255)                                                                                                 ggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCtt       >  1:388143‑M2/4‑98 (MQ=255)                                                                                                 ggcCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTa      >  1:1110203‑M2/4‑99 (MQ=255)                                                                                                    cTACAAA‑GGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTAC‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATc    <  2:2208611/98‑1 (MQ=255)                                                                                                    cTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg  >  2:410576/1‑100 (MQ=255)                                                                                                    |                                                                                                       GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAA‑AGGTGCCAGAACCGTAGGCCGGATAAGGC‑GTTCA‑CGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAG  >  NC_000913/411012‑411210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.