New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 445266	NA (NA)	3 (0.040)	3/168	NT	NA	noncoding (67/87 nt)	REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913	= 445281	NA (NA)					noncoding (82/87 nt)	REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP40 (repetitive extragenic palindromic) element; contains 2 REP sequences

GTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCT  >  NC_000913/445185‑445380                                                                                                 |                                                                                                    gtgCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcag                                                                                                  <  2:1352312‑M2/100‑4 (MQ=255)   gCGTTTTGTTCATGTCAGATGCGGGATGAACGCCTGATTCGGCCTACAAAGGTTGGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcaggc                                                                                                >  2:2304867‑M2/1‑95 (MQ=255)   gCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGcaggc                                                                                                >  1:334235‑M2/1‑95 (MQ=255)      ttttGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAAt                                                                                             >  1:1949354/1‑100 (MQ=255)         tGTTCATGTCAGATGCGGGATGAACGCGTGATTCGGCCTAAAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcg                                                                                          <  2:967679/100‑1 (MQ=255)         tGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcg                                                                                          <  1:2337394/100‑1 (MQ=255)          gTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgc                                                                                         >  2:2196138/1‑100 (MQ=255)           ttCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgcc                                                                                        <  1:1352320/100‑1 (MQ=255)            tCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgccg                                                                                       <  2:1984930/100‑1 (MQ=255)            tCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgccg                                                                                       >  1:2363264/1‑100 (MQ=255)             cATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTcgccgc                                                                                      >  1:2292586/1‑100 (MQ=255)              aTGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCcgcg                                                                                     <  2:1705953/100‑1 (MQ=255)                gTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGtt                                                                                   >  2:2209973/1‑100 (MQ=255)                gTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGtt                                                                                   >  2:263422/1‑100 (MQ=255)                gTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGtt                                                                                   >  1:2367339/1‑100 (MQ=255)                  cAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAAGCAATTCGCCGCGtttt                                                                                 >  2:1453884/1‑100 (MQ=255)                      tGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTAt                                                                             <  1:810813/100‑1 (MQ=255)                      tGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTAGCCGCGTTTTTTAt                                                                             >  2:808350/1‑100 (MQ=255)                       gCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATg                                                                            >  1:1926165/1‑100 (MQ=255)                           cATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGcccg                                                                        <  1:1213864/100‑3 (MQ=255)                             tGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCATAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGAc                                                                      <  1:887697/100‑1 (MQ=255)                              gAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACg                                                                     <  1:1049945/100‑1 (MQ=255)                              gAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACg                                                                     >  1:693588/1‑100 (MQ=255)                                  gCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAAtt                                                                 <  1:1711656/100‑1 (MQ=255)                                   ccTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTg                                                                >  1:1500293/1‑100 (MQ=255)                                   ccTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTg                                                                >  2:1706266/1‑100 (MQ=255)                                    cTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGGCGCGTTTTTTATGCCTGACGAATTGc                                                               >  2:1892331/1‑100 (MQ=255)                                    cTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGc                                                               >  1:1348221/1‑100 (MQ=255)                                    cTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGc                                                               <  1:918843/100‑1 (MQ=255)                                          cGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTc                                                         >  1:756836/1‑100 (MQ=255)                                           ggCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCt                                                        <  2:2016210/100‑1 (MQ=255)                                           ggCCTACAAAGGTTTGTAAGTCAGAAAATTTGTAGGCCTGATATGCGTAGCGCAGCAGTCAATTCGGCGCGTTTTTTATGCCTGACGAATTGCCTGTTc                                                         <  2:385236/99‑1 (MQ=38)                                            gCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTa                                                       <  1:2106095/100‑1 (MQ=255)                                            gCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTa                                                       >  1:863998/1‑100 (MQ=255)                                            gCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTa                                                       >  1:1775829/1‑100 (MQ=255)                                               tACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAtct                                                    >  2:2197106/1‑100 (MQ=255)                                               tACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAtct                                                    >  2:231223/1‑100 (MQ=255)                                               tACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAtct                                                    >  1:1518083/1‑100 (MQ=255)                                                aCAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAtctc                                                   <  1:583358/100‑1 (MQ=255)                                                aCAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGAGTTTTTTATGCCTGACGAATTGCCTGTTCTAtctc                                                   >  1:1796784/1‑100 (MQ=255)                                                 cAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCa                                                  <  1:983985/100‑1 (MQ=255)                                                 cAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCa                                                  <  2:1775815/100‑1 (MQ=255)                                                    aGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCa                                                  <  2:863996/97‑1 (MQ=255)                                                       tttGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGa                                            >  1:796388/1‑100 (MQ=255)                                                       tttGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGa                                            >  1:387886/1‑100 (MQ=255)                                                           tAATTCAGAAACTTTGTAGGCCTGCTAAGCGTAGCGCAACAGGCAATTCGCCGCGTTTTTTATGCCTGACTAATTGCCTGTTCTATCTCAAAGCGATTCg                                        <  2:487345/100‑1 (MQ=255)                                                           tAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGAtt                                          >  2:47794/1‑98 (MQ=255)                                                           tAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCg                                        >  1:1494102/1‑100 (MQ=255)                                                           tAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCg                                        >  1:451788/1‑100 (MQ=255)                                                           tAATTCAGAAACTTTGTAGGCCTGATAAGCGGAGCGCAGCAGGCAATTCACCGCGCTTTTTATACCTGACGAATTGCCTGTTCTAtccccatac                                              >  2:1160236/1‑87 (MQ=37)                                                            aaTTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGt                                       >  1:1375218/1‑100 (MQ=255)                                                             aTTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTc                                      <  2:1157359/100‑1 (MQ=255)                                                             aTTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTc                                      <  1:263424/100‑1 (MQ=255)                                                              ttCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCa                                     >  2:2381433/1‑100 (MQ=255)                                                               tCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCAc                                    <  1:1216017/100‑1 (MQ=255)                                                                cAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACt                                   >  2:1485778/1‑100 (MQ=255)                                                                  gAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACttt                                 <  1:2209993/100‑1 (MQ=255)                                                                  gAAACTTTGTAGGCCTCATAAGCGTAGCGCAGCAGGCCATTCGCCGCTTTTTTTATGCCTGACGAATTGCCTCTTATATCTCTGATCGATTCGTAACttt                                 <  2:1964094/100‑1 (MQ=37)                                                                      cTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTg                             <  2:1230646/100‑1 (MQ=255)                                                                      cTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTg                             >  1:2217241/1‑100 (MQ=255)                                                                       tttGTAGGCCTGATAAGCGTAGCGCAGcaggcccacaaagtttctgaattacaaacctttgtaggccgaatcaggcgttcatgccgcatctgacatgaac                            <  1:127434‑M2/100‑74 (MQ=255)                                                                        ttGTAGGCCTGATAAGCGTAGCGCAGcaggcctacaaagtttctgaattacaaacctttgtaggccgaatcaggcgttcatgccgcatctgacatgaaca                           <  1:1366074‑M2/100‑75 (MQ=255)                                                                         tGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCg                          <  1:1460685/100‑1 (MQ=255)                                                                         tGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCATGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCg                          <  1:1187082/100‑1 (MQ=255)                                                                           tAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGAt                        >  1:570029/1‑100 (MQ=255)                                                                           tAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGAt                        >  1:2167350/1‑100 (MQ=255)                                                                             ggCCTGATAAGCGTAGCGCAGcaggcctacaaagtttctgaattacaaacctttgtaggccgaatcaggcgttcatgccgcatctgacatgaacaaaacg                      <  1:848780‑M2/100‑80 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTTGCCGCGTTTTTTATGGCTGACGAATTGTCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  2:887048/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  2:476607/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  2:2079820/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  1:106111/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  1:162916/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   <  1:757910/100‑1 (MQ=255)                                                                                cTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTGTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTca                   >  2:715193/1‑100 (MQ=255)                                                                                  gATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTcaca                 >  1:288973/1‑100 (MQ=255)                                                                                   aTAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACAt                <  1:2381455/100‑1 (MQ=255)                                                                                   aTAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTGTTATGCCTGACGAATTGCCTGTTCTATCTCTGAGCGATTCGTCACTTTGCTGTCGATTTTcaca                 <  2:1913556/99‑1 (MQ=255)                                                                                    tAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATa               >  2:2381970/1‑100 (MQ=255)                                                                                      aGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCACAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAg             <  2:1667276/100‑1 (MQ=255)                                                                                       gCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGc            >  2:1355176/1‑100 (MQ=255)                                                                                       gCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGc            <  2:814932/100‑1 (MQ=255)                                                                                       gCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGc            >  1:813255/1‑100 (MQ=255)                                                                                       gCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAAATGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGc            >  1:1373077/1‑100 (MQ=255)                                                                                         gTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTAGCTCAAAGCGATTCATCACTTTACTGTCGATTTTCACATAAGCTg          <  2:2043548/100‑1 (MQ=255)                                                                                          tAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTg          <  2:1659655/99‑1 (MQ=255)                                                                                           aGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGaa        <  1:1531785/100‑1 (MQ=255)                                                                                             cgcAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATg      >  1:1600233/1‑100 (MQ=255)                                                                                              gcagcaGGCAATTCGCCGCGTTTTTTTTTTTTTTTTAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAAttt     >  2:1802775/1‑98 (MQ=255)                                                                                                agcagGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttc   <  1:1724393/100‑1 (MQ=255)                                                                                                 gcagGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttct  <  2:10677/100‑1 (MQ=255)                                                                                                 gcagGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGttct  >  1:131948/1‑100 (MQ=255)                                                                                                 |                                                                                                    GTGCGTTTTGTTCATGTCAGATGCGGCATGAACGCCTGATTCGGCCTACAAAGGTTTGTAATTCAGAAACTTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTCGCCGCGTTTTTTATGCCTGACGAATTGCCTGTTCTATCTCAAAGCGATTCGTCACTTTGCTGTCGATTTTCACATAAGCTGAATGTTCT  >  NC_000913/445185‑445380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.