New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 805981	NA (NA)	12 (0.150)	5/164	NT	NA	noncoding (178/178 nt)	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
	?	NC_000913	= 2340364	NA (NA)					noncoding (52/82 nt)	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP163 (repetitive extragenic palindromic) element; contains 2 REP sequences

ATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTGGGC  >  NC_000913/2340266‑2340458                                                                                                   |                                                                                               aTGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGg                                                                                               >  1:1968951‑M2/1‑99 (MQ=255) aTGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGg                                                                                               <  2:1781679‑M2/100‑2 (MQ=255)  tgctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgc                                                                                              <  2:408113‑M2/100‑3 (MQ=255)  tgctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgc                                                                                              <  2:1477879‑M2/100‑3 (MQ=255)  tgctgcACACGCAAAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgc                                                                                              <  2:1477836‑M2/100‑3 (MQ=255)   gctgaACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCCACAAATCCTCCCCGTCGgcc                                                                                             <  2:612921‑M2/100‑4 (MQ=255)    ctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccg                                                                                            >  2:268602‑M2/1‑96 (MQ=255)    ctgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccg                                                                                            <  1:1421620‑M2/100‑5 (MQ=255)     tgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccgg                                                                                           >  1:2206877‑M2/1‑95 (MQ=255)     tgcACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccgg                                                                                           >  2:2045482‑M2/1‑95 (MQ=255)       cacaCGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggat                                                                                         <  2:1012201‑M2/100‑8 (MQ=255)        acacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCGACAAATGCTCCCCGTAGGCCGGATa                                                                                        <  1:1139311/100‑1 (MQ=255)         cacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATaa                                                                                       >  2:1325421/1‑100 (MQ=255)         cacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATaa                                                                                       >  2:1325332/1‑100 (MQ=255)         cacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATaa                                                                                       <  1:592903/100‑1 (MQ=255)         cacGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATaa                                                                                       >  1:2269065/1‑100 (MQ=255)          acGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                      <  2:1807522/100‑1 (MQ=255)          acGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                      <  1:787809/100‑1 (MQ=255)          acGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAg                                                                                      >  1:2036175/1‑100 (MQ=255)           cGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAgg                                                                                     >  2:260445/1‑100 (MQ=255)           cGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAgg                                                                                     <  1:1659605/100‑1 (MQ=255)            gCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGc                                                                                    <  2:634308/100‑1 (MQ=255)             cAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCg                                                                                   <  2:291646/100‑1 (MQ=255)                 aTAAGTGAGGTTGATGTTTGGCCGCTCCAATGCCTGATGCCACGCTTGCCGCGTCTTTTCAGGCTTACAAAGGCTCCCCGTAGGCCGGATAAGGCGTTTa                                                                               <  2:370391/100‑1 (MQ=37)                 aTAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTa                                                                               <  1:279583/100‑1 (MQ=255)                 aTAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTa                                                                               <  2:974617/100‑1 (MQ=255)                     gTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgcc                                                                           <  1:941957/100‑1 (MQ=255)                     gTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgcc                                                                           <  2:1803046/100‑1 (MQ=255)                      tGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgccg                                                                          >  1:2175801/1‑100 (MQ=255)                      tGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTAcgccg                                                                          <  2:935068/100‑1 (MQ=255)                        aGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCa                                                                        <  1:1069616/100‑1 (MQ=255)                         ggTTGATGTTTGGCGGCGCCAAGTCTTTAGGCGACGCTGGCCGCGCCTTAGCAGGCCGACAAACGCGGTCCGTAGGCCGGATAAGGCGTTTACGCAGCAt                                                                       <  2:1811088/100‑1 (MQ=12)                         ggTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                                       >  2:865629/1‑100 (MQ=255)                          gTTGGTGTTTGTCCGTGCCAATTTTTGATGCGACGCTTGCCGCGTTTTATCAGGTCTACAAATGCTCCCCGTAGTCAGGATGCGGCGTTAAcgccttatc                                                                      <  2:1140668/100‑6 (MQ=16)                           ttGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  1:1368203‑M2/1‑73 (MQ=255)                           ttGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  1:428334‑M2/1‑73 (MQ=255)                           ttGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  1:800716‑M2/1‑73 (MQ=255)                           tcgatGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  2:1445922‑M2/3‑73 (MQ=255)                            tGATGTTTGGCCGCGCCAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  1:591784‑M2/1‑72 (MQ=255)                            tGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatcc                                                                     >  1:1637180‑M2/1‑72 (MQ=255)                             gATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatccgg                                                                   >  2:1539204‑M2/1‑71 (MQ=255)                              aTGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatccggc                                                                  >  1:729062‑M2/1‑70 (MQ=255)                              aTGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatccggc                                                                  >  1:73467‑M2/1‑70 (MQ=255)                              aTGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGgccggatgcggcgtaaacgccttatccggc                                                                  >  2:1208342‑M2/1‑70 (MQ=255)                               tGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                 >  2:2295314/1‑100 (MQ=255)                               tGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGCAGgccggatgcggcgtaaacgccttatccggcc                                                                 >  1:2178133‑M2/1‑69 (MQ=255)                               tGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCCTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                 >  2:1300283/1‑100 (MQ=255)                                gTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa                                                                >  1:542973/1‑100 (MQ=255)                                        gcgcCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCg                                                        <  1:1597193/100‑1 (MQ=255)                                          ccgatctccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGAc                                                      <  1:1873240/93‑1 (MQ=255)                                             aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAg                                                   <  1:189097/100‑1 (MQ=255)                                             aaTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAg                                                   >  2:2239303/1‑100 (MQ=255)                                                 ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGAcagatcgg                                               >  2:1873225/1‑93 (MQ=255)                                                    gATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGa                                            <  1:1501545/100‑1 (MQ=255)                                                       gCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTa                                         <  1:1012205/100‑1 (MQ=255)                                                        cGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAc                                        <  2:2166679/100‑1 (MQ=255)                                                        cGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAc                                        >  1:758967/1‑100 (MQ=255)                                                        cGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAc                                        >  1:1377424/1‑100 (MQ=255)                                                         gACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAcc                                       >  1:523403/1‑100 (MQ=255)                                                         gACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAcc                                       <  1:706567/100‑1 (MQ=255)                                                         gACGCTTGCCGCGTCTTACCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTAcc                                       <  1:2281345/100‑1 (MQ=255)                                                           cacTTGCCGCGTCCTATCAGGCCTACAAATGATCCCCGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCAt                                     >  1:1611739/3‑100 (MQ=37)                                                                gCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCAc                                >  2:82397/1‑100 (MQ=255)                                                                  cgcgTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCg                              >  1:1279307/1‑100 (MQ=255)                                                                    cgTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTc                            <  1:1925062/100‑1 (MQ=255)                                                                     gTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCa                           <  1:495810/100‑1 (MQ=255)                                                                      tCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCAt                          <  2:2291400/100‑1 (MQ=255)                                                                        ttATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCg                        >  2:968026/1‑100 (MQ=255)                                                                        ttATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCg                        <  1:465751/100‑1 (MQ=255)                                                                        ttATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCg                        <  1:1191630/100‑1 (MQ=255)                                                                        tgatgacgCCTACAAATGCTCCCCGAAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGAGCCGACAAGACAGTGATTACCATGTCACCGTCATCg                        <  2:1653930/93‑1 (MQ=25)                                                                          aTCAGGCCTACAAATGCTCCCCGTCGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCCTcca                       >  2:2215464/1‑97 (MQ=255)                                                                          aTCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGAc                      <  1:334146/100‑1 (MQ=255)                                                                          aTCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGAc                      >  2:251765/1‑100 (MQ=255)                                                                          aTCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGAc                      <  2:72327/100‑1 (MQ=255)                                                                           tCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACa                     <  2:168480/100‑1 (MQ=255)                                                                            cAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaa                    >  2:1377367/1‑100 (MQ=255)                                                                             aGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaaa                   >  1:1537752/1‑100 (MQ=255)                                                                               gCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaaaaa                 <  2:968495/100‑1 (MQ=255)                                                                               gCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaaaaa                 >  2:94015/1‑100 (MQ=255)                                                                               accTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACaaaaa                 <  1:256842/99‑1 (MQ=255)                                                                                 cTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAcc               <  1:1781694/100‑1 (MQ=255)                                                                                  tACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAAccc              >  1:2001191/1‑100 (MQ=255)                                                                                  tACAAATGCTCCCCGTAAGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAGAccc              >  1:1389383/1‑100 (MQ=255)                                                                                    cAAATGCTCCCCGTTTGCCGGATAAGGCGGTTACGCCGCATCCGGCACCCGTGCCGACTAGACAGTGATTCCCATTTCACCGTCATCGCCAAAAAcc               >  2:1630201/1‑97 (MQ=37)                                                                                    cAAATGCTCCCCGTACCCCGGATAAGGCGTTTACGCCGCATCCGCCAACCGTCCCGACTAGACAGTGATTACCATTTCACCGCCATCGACAACAACCCt             >  2:1844934/1‑99 (MQ=37)                                                                                     aaaTGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGc           >  2:1864118/1‑100 (MQ=255)                                                                                      aaTGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGcc          >  1:1716729/1‑100 (MQ=255)                                                                                       aTGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGc           <  1:968029/98‑1 (MQ=255)                                                                                       aTGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATGACCATTTCACCGTCATCGACAAAAACCCTGCCg         <  2:1426251/100‑1 (MQ=255)                                                                                         gCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGCGATTACCACTTCACCGTCATCGACAAAAACCCTGCCGTc       >  2:1742222/1‑100 (MQ=255)                                                                                          cTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCt      >  1:1312199/1‑100 (MQ=255)                                                                                           tCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTg     >  1:583356/1‑100 (MQ=255)                                                                                            ccccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTgg    >  2:1517528/1‑100 (MQ=255)                                                                                            ccccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTgg    <  2:652354/100‑1 (MQ=255)                                                                                            ccccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTgg    >  1:1457902/1‑100 (MQ=255)                                                                                             cccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTggg   <  2:2175782/100‑1 (MQ=255)                                                                                             cccGTAGGCCGGATAAGGCGTTTACGCCCCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTggg   <  2:516412/100‑1 (MQ=255)                                                                                              ccGTAGgccggataaggcgtttacgccgcatccggcctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgc  <  2:759662‑M2/100‑95 (MQ=255)                                                                                              ccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTGGGc  <  1:350332/100‑1 (MQ=255)                                                                                                   |                                                                                               ATGCTGCACACGCAGAATAAGTGAGGTTGATGTTTGGCCGCGCCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAATGCTCCCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAACCGTGCCGACTAGACAGTGATTACCATTTCACCGTCATCGACAAAAACCCTGCCGTCTGGGC  >  NC_000913/2340266‑2340458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.