New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1357754 =NA (NA)8 (0.100) 5/160 NT NA intergenic (‑86/+48) ymjA/puuP DUF2543 family protein/putrescine importer
?NC_000913 1357793 = NA (NA)noncoding (24/30 nt) REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 101 total aligned reads displayed.

GCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTAAC  >  NC_000913/1357696‑1357892
                                                                                                 |                                                                                                   
gCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATc                                                                                                   >  1:617541/1‑100 (MQ=255)
caaagtgccgttgtatgatggtgacagaacgccggtgagtgaaacgtaatagtcggatGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATc                                                                                                   >  1:2203922‑M1/59‑100 (MQ=255)
   tAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGa                                                                                                >  2:440061/1‑100 (MQ=255)
   tAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGa                                                                                                >  1:2254698/1‑100 (MQ=255)
    aaGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGAc                                                                                               <  1:252618/100‑1 (MQ=255)
    aaGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGGTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGAc                                                                                               <  2:532084/100‑1 (MQ=255)
     aGGGCGGATGATAGCACTCGTGATCCGGTTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACt                                                                                              <  2:807634/100‑1 (MQ=255)
      gggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTa                                                                                             >  2:618056/1‑100 (MQ=255)
       ggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTAt                                                                                            <  2:741050/100‑1 (MQ=255)
        gCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTAtt                                                                                           >  1:1050458/1‑100 (MQ=255)
        gCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTAtt                                                                                           >  1:2259400/1‑100 (MQ=255)
         cGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTa                                                                                          >  1:1483028/1‑100 (MQ=255)
          ttgtatgatggtgacagaacgccggtgagtgaaacgtaatagtcggatGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTAc                                                                                         >  2:675163‑M1/49‑100 (MQ=255)
            atgatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGt                                                                                       <  1:2373047/100‑1 (MQ=255)
              gatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGttt                                                                                     <  2:2221163/100‑1 (MQ=255)
               atAGCACTCGTGATCCTGGTCATACATCTTTTTATAGTTAATGTCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTAAGTTtc                                                                                    <  2:1525208/100‑1 (MQ=255)
               atAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                    <  1:1220376/100‑1 (MQ=255)
               atAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                    >  2:2031037/1‑100 (MQ=255)
                tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                    <  2:899877/99‑1 (MQ=255)
                 aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                  <  1:1405891/100‑1 (MQ=255)
                 aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                  <  1:1267092/100‑1 (MQ=255)
                 aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                  <  2:1132778/100‑1 (MQ=255)
                 aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                  <  1:344138/100‑1 (MQ=255)
                  gCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcact                                                                                 <  1:330297/100‑1 (MQ=255)
                   cACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcactc                                                                                >  1:88440/1‑100 (MQ=255)
                   cACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcactc                                                                                >  1:406604/1‑100 (MQ=255)
                     cTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGGCTATTACGTTtcactcac                                                                              >  1:153591/1‑100 (MQ=255)
                     cTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcactcac                                                                              >  1:1840751/1‑100 (MQ=255)
                     cTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcactcac                                                                              >  2:1153666/1‑100 (MQ=255)
                     cTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAAGGCGCCTCGCATCCGACTATTACGTTtcactcac                                                                              >  2:107679/1‑100 (MQ=255)
                      tCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCAcc                                                                             <  1:1284661/100‑1 (MQ=255)
                       cGTGATCCGGGTCATACATCTTATTATAGTTAATGGCGCGGCGCGTTACCATCAGGCCGGAGCAACAGCCACGCATCCCACTATTACGTTTCGCTCACCg                                                                            >  2:1356691/1‑100 (MQ=255)
                         tGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACACTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGc                                                                          >  1:918040/1‑100 (MQ=255)
                          gATCCGGGTCATACATCTTTTTATTTTTAATTGTGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                         >  2:19366/1‑100 (MQ=255)
                          gATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                         >  2:586120/1‑100 (MQ=255)
                           aTCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGt                                                                        <  2:571391/100‑1 (MQ=255)
                            tCCGGGTCATACATTTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGtt                                                                       <  2:2277678/100‑1 (MQ=255)
                            tCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGtt                                                                       <  2:1010361/100‑1 (MQ=255)
                             ccGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTc                                                                      <  1:2297720/100‑1 (MQ=255)
                             ccGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTc                                                                      <  2:18495/100‑1 (MQ=255)
                             ccGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTc                                                                      <  2:1584213/100‑1 (MQ=255)
                                 gTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTc                                                                  <  1:471997/100‑1 (MQ=255)
                                 gTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTc                                                                  <  1:1799010/100‑1 (MQ=255)
                                  tCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCa                                                                 >  1:742852/1‑100 (MQ=255)
                                   cATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCAc                                                                <  1:1358585/100‑1 (MQ=255)
                                     tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACca                                                              >  1:984384/1‑100 (MQ=255)
                                      aCATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCCCAGGCAGGATAATGCGCCGCGCATCCGACTATTCCGTTTCACTCACCGGCGTTCTGTCACca                                                              >  2:1129419/1‑99 (MQ=255)
                                         tCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatcat                                                          <  1:1369936/100‑1 (MQ=255)
                                         tCTTTTTATAGTTAATGGCGCGACGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatcat                                                          <  2:2270756/100‑1 (MQ=255)
                                          cTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATa                                                         >  1:1826802/1‑100 (MQ=255)
                                            ttttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACa                                                       <  1:2074796/100‑1 (MQ=255)
                                             gtaatagtcggatgcgcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACaa                                                      >  2:675163‑M2/53‑100 (MQ=255)
                                                ataGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACgg                                                   >  1:1634835/1‑100 (MQ=255)
                                                 taGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGc                                                  >  1:385896/1‑100 (MQ=255)
                                                  aGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCa                                                 <  2:2060890/100‑1 (MQ=255)
                                                   gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                                >  1:19468/1‑100 (MQ=255)
                                                       gatgcgcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTg                                            >  1:2203922‑M2/43‑100 (MQ=255)
                                                        tGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGc                                           >  1:1351208/1‑100 (MQ=255)
                                                         ggcgcggcgcGTTGCCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCg                                          <  1:1948439/100‑1 (MQ=255)
                                                           cgcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGAt                                        >  1:1379417‑M2/39‑100 (MQ=255)
                                                            gcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATa                                       >  1:1237519‑M2/38‑100 (MQ=255)
                                                            gcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATa                                       >  1:585744‑M2/38‑100 (MQ=255)
                                                             cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                      >  1:2171814‑M2/37‑100 (MQ=255)
                                                             cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                      >  2:201428‑M2/37‑100 (MQ=255)
                                                             cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACAGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                      >  2:1440005‑M2/37‑100 (MQ=255)
                                                             CGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                      <  1:2245948‑M1/100‑1 (MQ=255)
                                                              GGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgc                                     >  2:1711348‑M1/1‑100 (MQ=255)
                                                              GGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgc                                     <  2:191340‑M1/100‑1 (MQ=255)
                                                               GCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgcg                                    >  1:394843‑M1/1‑100 (MQ=255)
                                                               GCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgcg                                    >  1:236704‑M1/1‑100 (MQ=255)
                                                               GCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgcg                                    >  1:309396‑M1/1‑100 (MQ=255)
                                                                    ttACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGa                               <  1:271143/100‑1 (MQ=255)
                                                                    ttACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGACACTTTGCGATAGCGGCGGa                               >  2:1233675/1‑100 (MQ=255)
                                                                       tccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                            <  2:400117/99‑1 (MQ=255)
                                                                       cccTCAGGCAGTATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCTGCGGATCa                            <  2:1250552/100‑1 (MQ=255)
                                                                        ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCaa                           >  1:400119/1‑99 (MQ=255)
                                                                        ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                            <  2:801338/99‑1 (MQ=255)
                                                                        ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                           <  1:1016034/100‑1 (MQ=255)
                                                                         cTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTGTGTCACCATCATACAACGGCACTTTGCGCTAGCGGCGGATCAg                           >  1:374919/1‑99 (MQ=255)
                                                                          tCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGAt                         <  2:885362/100‑1 (MQ=255)
                                                                          tCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGAt                         <  1:953123/100‑1 (MQ=255)
                                                                          tCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGAt                         <  1:89041/100‑1 (MQ=255)
                                                                          tCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGAt                         <  1:1336515/100‑1 (MQ=255)
                                                                           caggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATa                        >  1:282032/1‑100 (MQ=255)
                                                                             ggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATAcc                      >  2:709988/1‑100 (MQ=255)
                                                                              gcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATa                        <  1:439540/97‑1 (MQ=255)
                                                                               caggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCAt                    >  1:1802668/1‑100 (MQ=255)
                                                                               caggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCCGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCAt                    >  2:1099490/1‑100 (MQ=255)
                                                                                aggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATa                   >  2:1971016/1‑100 (MQ=255)
                                                                                 ggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATaa                  <  1:2328232/100‑1 (MQ=255)
                                                                                  gATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCCTACAACGGCACGTTGCGATAGCGGCGGATCAGATACCATaaa                 >  2:871761/1‑100 (MQ=255)
                                                                                  gATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATaaa                 <  1:2197006/100‑1 (MQ=255)
                                                                                  gATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATaaa                 <  1:1079845/100‑1 (MQ=255)
                                                                                  gATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATaaa                 >  2:803549/1‑100 (MQ=255)
                                                                                      aTGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATg             <  1:186294/100‑1 (MQ=255)
                                                                                        gcgccgcgcATCCGACTATTACGTTTCACTCACCGTCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATgcg           <  2:1458594‑M2/91‑1 (MQ=255)
                                                                                          gccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGcgcc         <  1:893311‑M2/93‑1 (MQ=255)
                                                                                             gcgcATGCGACTATGACGTTTCACTCACCGGCGTACTGTCACCATCATACAAGGGCACTTTGCCAGAGCGGCGGATCAGATACCATAAATCTGCgccgcc      <  2:1377659/100‑1 (MQ=255)
                                                                                             gcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCAGAAATATGCgccgcc      >  2:1622959‑M2/5‑100 (MQ=255)
                                                                                                 aTCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTAAc  <  1:1600116/100‑1 (MQ=255)
                                                                                                 |                                                                                                   
GCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTAAC  >  NC_000913/1357696‑1357892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.