New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1843797NA (NA)7 (0.090) 5/166 NT NA noncoding (74/93 nt) REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 1843810 NA (NA)noncoding (87/93 nt) REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences

AGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCA  >  NC_000913/1843714‑1843908
                                                                                                |                                                                                                  
aGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCccc                                                                                                 >  1:1235527‑M2/1‑97 (MQ=255)
 gTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccg                                                                                                <  1:753‑M2/100‑5 (MQ=255)
 gTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccg                                                                                                >  2:875424‑M2/1‑96 (MQ=255)
   tttgtaggcctgataagcgtagcgccatcaggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGc                                                                                              >  1:1365866‑M2/34‑100 (MQ=255)
   tGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccggc                                                                                              <  1:1705898‑M2/100‑7 (MQ=255)
     tgtaggcctgataagcgtagcgccatcaggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCa                                                                                             >  1:2109112‑M2/32‑99 (MQ=255)
     tAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCaa                                                                                            <  1:80322/100‑1 (MQ=255)
       aaTGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccggcctac                                                                                          >  2:1044717‑M2/1‑90 (MQ=255)
         tGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGTAGCGCCCCCGGCAAAAtt                                                                                        >  2:1827377/1‑100 (MQ=255)
         ggcctgataagcgtagcgccatcaggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAAtt                                                                                        >  1:1271108‑M2/28‑100 (MQ=255)
          gCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCAGAATTTATTGCTGTTTCGCTCTAATGTAGGCCGGGCAAGCGAAGCGCGcccggccaaa                                                                                          <  2:1764885‑M2/97‑11 (MQ=255)
          GCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCggcaacat                                                                                         <  2:1410710‑M1/98‑4 (MQ=255)
           CCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTc                                                                                      <  2:2037975‑M1/100‑1 (MQ=255)
            CTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCa                                                                                     >  2:373651‑M1/1‑100 (MQ=255)
            CTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCa                                                                                     >  1:124268‑M1/1‑100 (MQ=255)
             TGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCAGGGCAAGCGCCGCGCCCCCGGCAAAATTTCa                                                                                     <  2:2082065‑M1/99‑1 (MQ=255)
                TGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCg                                                                                 >  1:565047‑M1/1‑100 (MQ=255)
                   cgcTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGttt                                                                              <  1:303034/100‑1 (MQ=255)
                    gcTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTa                                                                             <  2:2106894/100‑1 (MQ=255)
                     cTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTAt                                                                            <  1:912328/100‑1 (MQ=255)
                      tACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATg                                                                           <  2:931027/100‑1 (MQ=255)
                      tACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATg                                                                           <  1:1255585/100‑1 (MQ=255)
                        cGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAg                                                                         >  2:1613680/1‑100 (MQ=255)
                        cGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAg                                                                         <  1:1352037/100‑1 (MQ=255)
                         gCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGt                                                                        >  1:1753987/1‑100 (MQ=255)
                          cTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTCATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTa                                                                       >  2:1817292/1‑100 (MQ=255)
                          cTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTa                                                                       <  2:778935/100‑1 (MQ=255)
                              tcaggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTa                                                                   <  1:621084‑M2/94‑1 (MQ=255)
                               caggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTaa                                                                  >  1:2132959‑M2/6‑100 (MQ=255)
                               caggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTaa                                                                  >  1:2133327‑M2/6‑100 (MQ=255)
                               caggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTaa                                                                  <  2:1323228‑M2/95‑1 (MQ=255)
                                aggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAAc                                                                 <  2:1653158‑M2/96‑1 (MQ=255)
                                 ggcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACg                                                                >  1:1998083‑M2/4‑100 (MQ=255)
                                 ggcCTACAAAGGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACg                                                                <  2:1730511‑M2/97‑1 (MQ=255)
                                  gcCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACgg                                                               >  2:1661350‑M2/3‑100 (MQ=255)
                                    cTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcc                                                             <  1:1680098‑M2/100‑40 (MQ=255)
                                    cTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgat                                                             <  1:1114140/100‑1 (MQ=255)
                                     tACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgatg                                                            <  1:869613/100‑1 (MQ=255)
                                     tACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgatg                                                            >  1:1312704/1‑100 (MQ=255)
                                     tACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgatg                                                            <  2:525970/100‑1 (MQ=255)
                                      aCAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgatga                                                           >  1:525972/1‑100 (MQ=255)
                                      aCAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGgatga                                                           >  2:2110262/1‑100 (MQ=255)
                                         aaTGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGc                                                        <  2:980733/100‑1 (MQ=255)
                                             ggCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTccc                                                    <  2:2315504/100‑1 (MQ=255)
                                              gCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTcccc                                                   >  2:2353000/1‑100 (MQ=255)
                                                acaATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCAc                                                 <  2:1706836/100‑1 (MQ=255)
                                                  aaTTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACgg                                               >  2:466726/1‑100 (MQ=255)
                                                   aTTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGa                                              >  1:873022/1‑100 (MQ=255)
                                                     tCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAAc                                            >  2:277808/1‑100 (MQ=255)
                                                          gCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTc                                       <  2:1998066/100‑1 (MQ=255)
                                                          gCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTc                                       >  1:2015413/1‑100 (MQ=255)
                                                           cAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAACATTTCAGGCGTTTATGAGTATTCAACGGATGATACTCCCCACGGAACATGTCt                                      >  2:1140682/1‑100 (MQ=255)
                                                           cAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCt                                      >  2:679279/1‑100 (MQ=255)
                                                            aGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCtt                                     <  1:2353021/100‑1 (MQ=255)
                                                             gTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTa                                    <  2:2338010/100‑1 (MQ=255)
                                                             gTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTa                                    >  1:1979825/1‑100 (MQ=255)
                                                              ttACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTAt                                   <  1:1666140/100‑1 (MQ=255)
                                                               tACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATg                                  >  2:1982671/1‑100 (MQ=255)
                                                               tACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATg                                  >  1:1883093/1‑100 (MQ=255)
                                                               tACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATg                                  <  2:294412/100‑1 (MQ=255)
                                                               tACGCTCTAATATAGGCGGGGCCAGCGCAGGGCCCCCGGGAAAATTTCCGGCGGTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATg                                  <  2:2309478/100‑1 (MQ=255)
                                                                  gCTCTAATGTAGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccat                               <  1:1103678‑M2/100‑70 (MQ=255)
                                                                   ctctAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGcc                              >  1:1066573/1‑100 (MQ=255)
                                                                   ctctAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGcc                              >  1:1917662/1‑100 (MQ=255)
                                                                   ctctAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGcc                              >  1:409057/1‑100 (MQ=255)
                                                                   ctctAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTCAACGGATGATGCTCCCCACGGAACATTTCTTATGGGcc                              >  2:1997868/1‑100 (MQ=255)
                                                                    tctAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGCCCa                             >  2:370345/1‑100 (MQ=255)
                                                                      ttaTGTAGGCCTGGCAAGCGCAGCGCGCCCGGCAAAATTTCAGGCTTTTATGAGTATTGAACTTATGATCCTCTCCACGGAAAATTTCTTATGTGcc                              <  2:1284801/95‑1 (MQ=255)
                                                                      tAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCaa                            <  2:1879673/99‑1 (MQ=255)
                                                                      tAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAAc                           >  2:1171084/1‑100 (MQ=255)
                                                                       aaTGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACg                          >  2:1902620/1‑100 (MQ=255)
                                                                        aTGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACgg                         <  1:325875/100‑1 (MQ=255)
                                                                         tGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGTCGTTTATGAGTATTTAACGGCTGATGCTCCGCACGGAACATTTCTTATGGGCCAAggg                         >  2:2080328/1‑99 (MQ=255)
                                                                         tGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGc                        >  2:671879/1‑100 (MQ=255)
                                                                         tGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAAGTTCAGGCGTTTATGAGTACTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGc                        <  2:1323357/100‑1 (MQ=255)
                                                                          gTAGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccatcaggcatt                       <  2:73114‑M2/100‑78 (MQ=255)
                                                                          gTAGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccatcaggcatt                       <  2:689580‑M2/100‑78 (MQ=255)
                                                                          gTAGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccatcaggcatt                       <  2:1036578‑M2/100‑78 (MQ=255)
                                                                            aGGCCGGGCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccatcaggcattta                     <  1:165129‑M2/100‑80 (MQ=255)
                                                                             ggCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCAttt                    <  1:855567/100‑1 (MQ=255)
                                                                             ggCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCAttt                    >  1:1111821/1‑100 (MQ=255)
                                                                             ggCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCAttt                    >  2:2352772/1‑100 (MQ=255)
                                                                                cGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCtt                 <  1:607658/100‑1 (MQ=255)
                                                                                cGGGCAAGCGCAGCGCCCCCGGAAAAATTTGAGGCGTTTATGAGTATGTAACGGATGATGCTCCCCAAGGAACATTTCTTATGGGCCAACGGCATTTCtt                 >  2:190565/1‑100 (MQ=255)
                                                                                 gggCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCtt                 <  2:864801/99‑1 (MQ=255)
                                                                                  ggCAAGCGCAGCGCCcccggcctacattagagcgtaactgcaatgaattgtgcccatttgtaggcctgataagcgtagcgccatcaggcatttacaactt               <  1:241141‑M2/100‑86 (MQ=255)
                                                                                  ggCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTAc               <  2:800347/100‑1 (MQ=255)
                                                                                  ggCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTAc               >  2:1864141/1‑100 (MQ=255)
                                                                                  ggCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTAc               >  1:2101580/1‑100 (MQ=255)
                                                                                   gCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACt              >  1:22646/1‑100 (MQ=255)
                                                                                   gCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACt              >  1:525561/1‑100 (MQ=255)
                                                                                    cAAGCGCAGCGCGCCCGGCAAAATTTCAGTCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTAc               <  2:2019419/98‑1 (MQ=255)
                                                                                    cAAGCGCAGCGCCCCCGGCACAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTg             >  1:2244141/1‑100 (MQ=255)
                                                                                    cAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTg             >  1:1836673/1‑100 (MQ=255)
                                                                                      agcgcagcgcCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTa           >  2:2099124/1‑100 (MQ=255)
                                                                                       gcgcagcgcCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAg          <  1:1715747/100‑1 (MQ=255)
                                                                                              gcCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTccc   <  1:1353873/100‑1 (MQ=255)
                                                                                                ccccGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCa  <  2:2312417/99‑1 (MQ=255)
                                                                                                |                                                                                                  
AGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGCAAGCGCAGCGCCCCCGGCAAAATTTCAGGCGTTTATGAGTATTTAACGGATGATGCTCCCCACGGAACATTTCTTATGGGCCAACGGCATTTCTTACTGTAGTGCTCCCA  >  NC_000913/1843714‑1843908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.