New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2304947NA (NA)13 (0.160) 8/164 NT NA noncoding (531/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2305042 NA (NA)noncoding (626/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 145 total aligned reads displayed.

TCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACG  >  NC_000913/2304944‑2305141
                                                                                                  |                                                                                                   
tCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCAGCATCCAACATCTAACGCACGAGCCGGTTGCCTGATg                                                                                                    >  2:1078208/1‑100 (MQ=255)
 cTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGc                                                                                                   <  2:1699508/100‑1 (MQ=40)
  ttATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCg                                                                                                  >  2:2240889/1‑100 (MQ=255)
  ttATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCg                                                                                                  <  1:1414126/100‑1 (MQ=255)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGa                                                                                                 >  1:520833/1‑100 (MQ=255)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGa                                                                                                 >  1:1183019/1‑100 (MQ=255)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGa                                                                                                 >  1:1218277/1‑100 (MQ=255)
   tATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGa                                                                                                 >  2:318489/1‑100 (MQ=255)
    aTCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                >  1:1097437/1‑100 (MQ=255)
    aTCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                >  1:1574744/1‑100 (MQ=40)
     tCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                <  1:2161833/99‑1 (MQ=40)
      caagCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATg                                                                                                    <  2:1066195/91‑1 (MQ=255)
       aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCt                                                                                             <  1:696191/100‑1 (MQ=255)
       aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCt                                                                                             <  1:318491/100‑1 (MQ=255)
        ggCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCCACATCTAACGCCCGAGCCGGTTGCCGGATGCGACGCt                                                                                             >  2:1913870/1‑99 (MQ=255)
         ccgatctccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                           <  2:2358806/93‑1 (MQ=255)
           cTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                                                                         <  2:656919/100‑1 (MQ=40)
             acacCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCACCATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcgc                                                                                        >  2:2329626/1‑99 (MQ=255)
             acacCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGcgcg                                                                                       >  2:1012396/1‑100 (MQ=40)
             acacCGCTGTGAAGTGCGGCACCCCGTAGGTTGGATAAGGCGGATACGCCGCGCCCCGCATAGAGCACCCGAGCCGATTGGCGGAGGCCACGCTgg                                                                                           >  2:591930/1‑96 (MQ=2)
               acCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     <  2:2335892/100‑1 (MQ=255)
               acCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     <  1:2059415/100‑1 (MQ=255)
               acCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     <  1:762821/100‑1 (MQ=255)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTggagatcgg                                                                                    >  1:2358827/1‑93 (MQ=255)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    <  2:1128170/100‑1 (MQ=40)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  2:2108321/1‑100 (MQ=255)
                ccGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  2:1923806/1‑100 (MQ=255)
                  gCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATgcgacgcgccagcgtcgca                                                                                  >  2:1837708‑M2/1‑81 (MQ=255)
                    tatgatGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgc                                                                                   >  2:1780419‑M2/3‑79 (MQ=255)
                     gtgAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCa                                                                               <  2:1658315/100‑1 (MQ=40)
                      tgAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACACCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcag                                                                              >  1:1118209‑M2/1‑77 (MQ=255)
                       gAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcagg                                                                             >  1:1859268‑M2/1‑76 (MQ=255)
                       gAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGc                                                                             >  1:510800/1‑100 (MQ=255)
                        aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCa                                                                            <  1:1382674/100‑1 (MQ=255)
                        aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCa                                                                            >  2:439072/1‑100 (MQ=255)
                        aaGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggc                                                                            >  1:2007175‑M2/1‑75 (MQ=255)
                         aGTGCTCCACCCCGTAGGTTGGATAAGGGGGTTGCGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatca                                                                               >  2:387928‑M2/1‑74 (MQ=255)
                            gCTGCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCCAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        >  2:2250369‑M2/1‑71 (MQ=255)
                            gCTCCACCGCGTAGGTCGGATAAGGCGGTTACGCAGCATCCAACACCTAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATAc                                                                         <  2:1320807/99‑1 (MQ=14)
                             cTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGc                                                                       >  2:467989/1‑100 (MQ=255)
                             cTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCAGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        >  2:576274‑M2/1‑70 (MQ=255)
                              tccaccgattAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGcc                                                                      <  2:1260161/91‑1 (MQ=255)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCca                                                                     >  2:270442/1‑100 (MQ=255)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCca                                                                     >  2:1485806/1‑100 (MQ=255)
                               ccACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCca                                                                     <  2:2027631/100‑1 (MQ=255)
                                 aCCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCTACGCTGGCTCGTCTTATCAGCATACGCcaca                                                                   >  2:1613258/1‑100 (MQ=255)
                                  ccccGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACAt                                                                  >  1:92478/1‑100 (MQ=255)
                                  ccccGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACAt                                                                  >  1:1236023/1‑100 (MQ=255)
                                    ccGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATcc                                                                <  1:1164277/100‑1 (MQ=255)
                                     cGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCATGATGCGACGCTGGCGCGTCTTATCAGCCTACGCCACATctg                                                               <  1:1615593/100‑3 (MQ=255)
                                        aGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGc                                                             <  1:2334755/99‑1 (MQ=255)
                                        aGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCa                                                            <  2:1451746/100‑1 (MQ=255)
                                        aGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCa                                                            <  1:2327396/100‑1 (MQ=255)
                                        aGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCa                                                            <  2:1973406/100‑1 (MQ=11)
                                            tGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATAcc                                                        <  1:589213/100‑1 (MQ=255)
                                             ggATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCCTTCCCCACCTGCGGCATAc                                                         >  2:400766/1‑98 (MQ=11)
                                             ggATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCa                                                       <  1:439074/100‑1 (MQ=255)
                                              gATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgt                                                      >  2:1311404‑M2/1‑53 (MQ=255)
                                              gATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATAccct                                                      >  2:334701/1‑98 (MQ=255)
                                                tAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGc                                                    >  2:1940536/1‑100 (MQ=255)
                                                  aGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCg                                                  >  1:1049662/1‑100 (MQ=255)
                                                  aGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCg                                                  >  1:1779057/1‑100 (MQ=255)
                                                  aGGCGCTTACGCGGCATTCCACATCTAACGCGCGAGCCGGTTGCCTGATGCGCCGCTTGCGCGTCGTATCAGCATACGCCACATGCGGCATACCATGcag                                                  >  2:1404346/1‑98 (MQ=18)
                                                   ggCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCgg                                                 <  1:719005/100‑1 (MQ=255)
                                                     cGGTTACGCCGCATTCAACATCTAACGCCAGAGCCGGTTGCCTGATGCGACGCCGGCGCGTCTTATCAGAATACGCCACATCCGGCATACCATGCCgg                                                 >  2:78185/1‑98 (MQ=21)
                                                     cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAt                                               <  2:1833693/100‑1 (MQ=18)
                                                     cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAt                                               <  1:2309559/100‑1 (MQ=18)
                                                      ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGAtg                                              <  2:573097/100‑1 (MQ=18)
                                                      ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAtg                                              <  2:1471128/100‑1 (MQ=255)
                                                      ggTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGAtg                                              <  2:200861/100‑1 (MQ=255)
                                                          aCGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGATGTGGc                                          <  1:2327287/100‑1 (MQ=21)
                                                           cgccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCg                                         >  1:2062280/1‑100 (MQ=255)
                                                           cgccgcATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCg                                         >  1:952878/1‑100 (MQ=255)
                                                            gcgccATCCCAAATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGc                                          <  1:2092089/94‑1 (MQ=21)
                                                              cgcATCCGACCTCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATGGTATGCCGGATGTgg                                           <  2:382075/95‑1 (MQ=18)
                                                                cATCCAACATCTACCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCa                                    <  2:11438/100‑1 (MQ=255)
                                                                cATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCa                                    <  1:10653/100‑1 (MQ=255)
                                                                cATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCa                                    <  1:1184090/100‑1 (MQ=255)
                                                                      aCATCTAACGCCCGAGCCGGTTGCCTGATGAGACGATGGCGCGTCTTATCAGCATACGCCACATACGGCATACCATGCCGGATGTGGCGTATCATTACaa                              >  2:1291046/1‑100 (MQ=255)
                                                                          cTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCa                          <  1:528220/100‑1 (MQ=255)
                                                                                   gAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGcc                 <  1:433128/100‑1 (MQ=255)
                                                                                      gtgcatgcctgATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtg                >  2:240232‑M2/6‑13 (MQ=255)
                                                                                          agggctgataagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggag             >  2:433126‑M2/5‑9 (MQ=255)
                                                                                           tGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCttt         <  2:1403106/100‑1 (MQ=255)
                                                                                            gCCTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcactt        >  1:485707‑M2/1‑7 (MQ=255)
                                                                                            gCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCtttt        <  1:2009555/100‑1 (MQ=255)
                                                                                            gCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCtttt        <  2:127300/100‑1 (MQ=255)
                                                                                             ccTGATcagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagca           >  2:2059397‑M2/1‑6 (MQ=255)
                                                                                             ccTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttc       >  1:1365726‑M2/1‑6 (MQ=255)
                                                                                             ccTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCttttt       >  1:303314/1‑100 (MQ=255)
                                                                                               tGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacgggggggcgcacttc       <  2:493960‑M2/98‑95 (MQ=255)
                                                                                               tGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGa     >  2:1226445/1‑100 (MQ=255)
                                                                                               tGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGa     <  1:270444/100‑1 (MQ=255)
                                                                                                gATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcaca    <  1:610441‑M2/100‑98 (MQ=255)
                                                                                                 aTaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcacag   >  1:186300‑M2/1‑2 (MQ=255)
                                                                                                 aTaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcacag   <  1:1557258‑M2/100‑99 (MQ=255)
                                                                                                  taagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcacagc  >  1:777258‑M2/1‑1 (MQ=255)
                                                                                                  taagacgcgccagcgtcgcatcaggcaaccggctcgggcgttagatgtcggatgcggcgtgaccgccttatccgacctacggggtgccg             <  2:2142648‑M2/89‑89 (MQ=255)
                                                                                                  tGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACg  <  2:1356810/100‑1 (MQ=255)
                                                                                                  tGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACg  >  2:797858/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACG  >  NC_000913/2304944‑2305141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.