New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2430980NA (NA)8 (0.100) 8/164 NT NA noncoding (52/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2431012 NA (NA)noncoding (84/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 152 total aligned reads displayed.

GCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGG  >  NC_000913/2430913‑2431110
                                                                                                   |                                                                                                  
gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC                                                                                                    <  2:1737330‑M2/100‑1 (MQ=255)
gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC                                                                                                    >  1:184546‑M2/1‑100 (MQ=255)
 cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                                                   <  1:2148320/100‑1 (MQ=255)
  aTCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCaa                                                                                                  <  1:1969635/100‑1 (MQ=255)
    cGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGa                                                                                                >  2:101116/1‑100 (MQ=255)
    cGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGa                                                                                                >  2:1063528/1‑100 (MQ=255)
     gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                                               >  1:849271/1‑100 (MQ=255)
     gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                                               >  2:1333008/1‑100 (MQ=255)
      ggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAcc                                                                                              >  1:50345/1‑100 (MQ=255)
          aTGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAt                                                                                          <  1:337942/100‑1 (MQ=255)
          aTGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAt                                                                                          <  2:1926779/100‑1 (MQ=255)
             cGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTaa                                                                                       >  1:1985995/1‑100 (MQ=255)
                gtCGGATGCGGCGTAAACGCCTTAGCCGGCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                                                    <  1:2257440/100‑1 (MQ=255)
                 tCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTATCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCTCATCAGGCAAGACCGTATTAATTCg                                                                                   <  2:1137071/100‑1 (MQ=255)
                 tCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                                                   >  2:1202814/1‑100 (MQ=255)
                  cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                                                  <  1:187821/100‑1 (MQ=255)
                  cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                                                  <  2:368705/100‑1 (MQ=255)
                   ggATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGc                                                                                 <  1:1664991/100‑1 (MQ=255)
                   ggATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGc                                                                                 >  1:1409098/1‑100 (MQ=255)
                    gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                                                                <  1:1015807/100‑1 (MQ=255)
                    gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                                                                <  1:2042180/100‑1 (MQ=255)
                      tGCGGCGTAAACGCCTTATCCGACCTGCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                                                              >  1:1447578/1‑100 (MQ=255)
                       gcggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtat                                                                             <  2:2350014/100‑1 (MQ=255)
                         ggcgTAAACGCCTTGTCCGACCTAGGGTGTTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                                                           <  2:39818/100‑1 (MQ=37)
                         ggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                                                           >  1:731502/1‑100 (MQ=255)
                          gcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                                                          <  1:101117/100‑1 (MQ=255)
                          gcgTAAACGCCTTATCCGACCTACGGTCCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                                                           <  2:702366/99‑1 (MQ=255)
                                aCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTa                                                                    <  2:600685/100‑1 (MQ=255)
                                aCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTa                                                                    >  2:1063886/1‑100 (MQ=255)
                                    cTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                <  1:877637/100‑1 (MQ=255)
                                    cTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                >  1:1305372/1‑100 (MQ=255)
                                    cTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                                                                >  1:1305558/1‑100 (MQ=255)
                                     ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                                                               <  1:1837834/100‑1 (MQ=255)
                                       aaccGACCTACGGATCTACCCCTGCGTAGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGcc                                                             >  1:1605589/3‑100 (MQ=255)
                                       aTCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAACCCATTACCACGcc                                                             >  1:801460/1‑100 (MQ=255)
                                         ccGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCAc                                                           <  1:593809/100‑1 (MQ=255)
                                           gACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACtt                                                         >  2:2316504/1‑100 (MQ=255)
                                           gACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACtt                                                         >  2:1615745/1‑100 (MQ=255)
                                              ctccGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGACAGCGTCGCATCAAGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                      <  2:1544412/97‑1 (MQ=255)
                                              cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                                                      <  2:238394/100‑1 (MQ=255)
                                               tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                                                     <  1:213430/100‑1 (MQ=255)
                                               tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                                                     <  1:694570/100‑1 (MQ=255)
                                               naCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATCAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                                                     >  2:1315633/2‑100 (MQ=255)
                                                aCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGcc                                                    <  1:1576175/100‑1 (MQ=255)
                                                aCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGcc                                                    <  2:1139908/100‑1 (MQ=255)
                                                     tCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCTTATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgaca                                               <  1:2133812‑M2/100‑54 (MQ=255)
                                                      cTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAg                                              >  1:1342824/1‑100 (MQ=255)
                                                       tACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGt                                             <  1:1063890/100‑1 (MQ=255)
                                                        aCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGtt                                            >  1:934913/1‑100 (MQ=255)
                                                        aCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGtt                                            >  1:1963629/1‑100 (MQ=255)
                                                         ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg                                           >  1:1054630/1‑100 (MQ=255)
                                                          cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGc                                          <  2:883514/100‑1 (MQ=255)
                                                           ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAACGTTGCt                                         >  2:671702/1‑100 (MQ=255)
                                                             tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc                                       <  2:1289807/100‑1 (MQ=255)
                                                             tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc                                       <  1:779529/100‑1 (MQ=255)
                                                             tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc                                       <  2:849269/100‑1 (MQ=255)
                                                              gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcc                                      <  1:632131‑M2/100‑63 (MQ=255)
                                                              gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCa                                      <  2:2135968/100‑1 (MQ=255)
                                                               cGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgccc                                     <  2:626334‑M2/100‑64 (MQ=255)
                                                                ntAGGCCTGATAAGACGCGCAAGCGTCGAATCAGGCAAGACCGTATTAATTCGGCGAATAACGCATTACCACGCCACTTAAGCCAGAAAGTTGGTTc                                       >  2:662702/2‑97 (MQ=37)
                                                                  aGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgat                                  <  2:2172726‑M2/100‑67 (MQ=255)
                                                                  aGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTc                                  <  1:1870357/100‑1 (MQ=255)
                                                                    gCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgc                                <  1:1228550‑M2/100‑69 (MQ=255)
                                                                     ccTGTTAAGACGCGCCAGCGTCGCATAAGGCACGACCGTATTAATTCGGCGTATAGCCAATTAGCACACCACTAAAGCCAGAAAGTTGCTTCAACTc                                  >  2:2022601/1‑97 (MQ=37)
                                                                     ccTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgcc                               <  2:460957‑M2/100‑70 (MQ=255)
                                                                     ccTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                               <  1:171714/100‑1 (MQ=255)
                                                                     ccTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCAcc                               >  2:1180347/1‑100 (MQ=255)
                                                                      cTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCCCGCCACTTAAGCCAGAAAGTTGCTTCAACTCAccc                              >  2:294418/1‑100 (MQ=255)
                                                                       tGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgc                             <  1:1344058‑M2/100‑72 (MQ=255)
                                                                        gATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAg                            <  1:751040/100‑1 (MQ=255)
                                                                        gATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGCATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAg                            <  2:85828/100‑1 (MQ=255)
                                                                           aaGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGa                         <  2:2065738/100‑1 (MQ=255)
                                                                            aGACGCGCCAGCGTCGCATTAGGCAAGACCGTATTAATTCGGCGTATAGCGCATTACCACGACACTTAAGCCAGGACGTTGCTTCAACTCAACCAGCGaa                        >  2:2375664/1‑100 (MQ=255)
                                                                            aGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGaa                        >  1:552198/1‑100 (MQ=255)
                                                                            aGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGaa                        <  2:315527/100‑1 (MQ=255)
                                                                            aGACGCGCCAGCGTCACATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGaa                        >  1:1341690/1‑100 (MQ=255)
                                                                             gACGCGCCAGCGTCTTATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggc                       >  2:2133795‑M2/1‑23 (MQ=255)
                                                                               cgcgCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCt                     <  1:47284/100‑1 (MQ=255)
                                                                                 cgcCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCttt                   >  1:1900372/1‑100 (MQ=255)
                                                                                   ccAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCa                 <  1:306074/100‑1 (MQ=255)
                                                                                   ccAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCa                 <  2:1514891/100‑1 (MQ=255)
                                                                                    cAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAg                <  1:37336/100‑1 (MQ=255)
                                                                                     aGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAg                <  1:803937/99‑1 (MQ=255)
                                                                                     aGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGc               >  2:2175967/1‑100 (MQ=255)
                                                                                     aGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGc               <  1:2152713/100‑1 (MQ=255)
                                                                                         tCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTAt           <  1:878904/100‑1 (MQ=255)
                                                                                          cGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATc          >  1:1863676/1‑100 (MQ=255)
                                                                                           ggaggagccAACACCGTAATAATTCCGCGTATAGCCCAATACCACGCCACTTTAGCCAGAAACTTGCTTCAATTCACCCAGCGAACCTTTCAg                <  2:1622286/85‑1 (MQ=255)
                                                                                           gCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCt         <  1:1120911/100‑1 (MQ=255)
                                                                                            cATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCtt        >  1:30957/1‑100 (MQ=255)
                                                                                            cATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCtt        >  1:51758/1‑100 (MQ=255)
                                                                                               cAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgt     >  2:1366007‑M2/1‑5 (MQ=255)
                                                                                               cAGGCAAGACCGTATTAATTCGGCTTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCg     <  2:710876/100‑1 (MQ=255)
                                                                                                aGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgtt    <  2:29876‑M2/100‑97 (MQ=255)
                                                                                                aGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgtt    <  2:1813958‑M2/100‑97 (MQ=255)
                                                                                                 ggCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccgatgccgcaaaggcataaaaagtcgatggcgttg   <  1:2329983‑M2/100‑98 (MQ=255)
                                                                                                  gCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAgg  >  1:1495468/1‑100 (MQ=255)
                                                                                                  gCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAgg  <  1:2054732/100‑1 (MQ=255)
                                                                                                  gCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAgg  <  1:822776/100‑1 (MQ=255)
                                                                                                  gCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTCATCTTTCGAgg  <  1:43192/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCACCCAGCGAACCTTTCAGCTTATCTTTCGAGG  >  NC_000913/2430913‑2431110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.