New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2617968 =NA (NA)5 (0.060) 3/164 NT NA noncoding (1/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2618001 = NA (NA)noncoding (34/37 nt) REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences REP182 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 110 total aligned reads displayed.

CGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCAC  >  NC_000913/2617902‑2618098
                                                                                                   |                                                                                                 
cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                                                   <  1:2216142/100‑1 (MQ=255)
cgtcCACCGGAGCAGGTACTGGAAATCGTGGGGTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                                                   >  1:636551/1‑100 (MQ=255)
  tcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAACACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTa                                                                                                 >  2:1676383/1‑100 (MQ=255)
    ttgtcggatgcggcgcgaacgccttatccgaactacgcgaagttaatccatagtattcgtagGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                                                                               >  1:263458‑M1/63‑100 (MQ=255)
     aCCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGa                                                                                              >  2:534412/1‑100 (MQ=255)
      ccGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGaa                                                                                             >  1:1776032/1‑100 (MQ=255)
      ccGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGaa                                                                                             >  1:1624847/1‑100 (MQ=255)
       cGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAAt                                                                                            <  2:1343434/100‑1 (MQ=255)
           gCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTa                                                                                        <  2:1220928/100‑1 (MQ=255)
            cAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTAt                                                                                       <  2:412906/100‑1 (MQ=255)
            cAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTAt                                                                                       >  1:1649523/1‑100 (MQ=255)
             aGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATg                                                                                      <  1:866755/100‑1 (MQ=255)
               gTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGa                                                                                    <  1:1113672/100‑1 (MQ=255)
               gTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGa                                                                                    >  1:1715990/1‑100 (MQ=255)
                 aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGCGTACTATGGAtt                                                                                  >  1:971064/1‑100 (MQ=255)
                 aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAtt                                                                                  >  1:1467626/1‑100 (MQ=255)
                 aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAtt                                                                                  >  1:885608/1‑100 (MQ=255)
                 aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAtt                                                                                  >  1:1648563/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  2:1238467/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  1:681762/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  1:681809/1‑100 (MQ=255)
                   tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                                                                >  2:1152860/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:2204389/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:340921/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               <  1:277662/100‑1 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:431692/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:716139/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:2223317/1‑100 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               <  2:663839/100‑1 (MQ=255)
                    ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                                                               >  1:2009576/1‑100 (MQ=255)
                        aTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                                                           <  2:2019079/100‑1 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                                                         >  2:2176358/1‑100 (MQ=255)
                          cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                                                         <  2:1864492/100‑1 (MQ=255)
                              ggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGt                                                                     <  1:2183993/100‑1 (MQ=255)
                                ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                                                   >  1:1340318/1‑100 (MQ=255)
                                ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                                                   >  1:2025558/1‑100 (MQ=255)
                                ttAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTc                                                                   <  2:736468/100‑1 (MQ=255)
                                 tAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCg                                                                  <  2:911326/100‑1 (MQ=255)
                                  aaGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCgg                                                                 >  1:1287314/1‑100 (MQ=255)
                                   aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGa                                                                <  2:2025540/100‑1 (MQ=255)
                                   aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGa                                                                <  1:2204157/100‑1 (MQ=255)
                                    gATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                                                               >  1:774517/1‑100 (MQ=255)
                                     aTGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                                                              >  2:867855/1‑100 (MQ=255)
                                     aTGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                                                              >  2:159140/1‑100 (MQ=255)
                                        tgCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                                                           <  2:875103/100‑1 (MQ=255)
                                         gCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                                                          <  1:1348025/100‑1 (MQ=255)
                                         gCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                                                          >  2:1434815/1‑100 (MQ=255)
                                           tCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGt                                                        >  2:1226710/1‑100 (MQ=255)
                                              aTCGCTAGTTGAAGTACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCg                                                         <  2:162276/96‑1 (MQ=255)
                                                cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                                                   >  1:1418870/1‑100 (MQ=255)
                                                cGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTcgcg                                                   <  1:1486858/100‑1 (MQ=255)
                                                  cTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgcc                                                 <  2:2279013/100‑1 (MQ=255)
                                                   tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg                                                <  1:1027709/100‑1 (MQ=255)
                                                   tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg                                                <  1:2142807/100‑1 (MQ=255)
                                                   tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg                                                <  1:787487/100‑1 (MQ=255)
                                                    aGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccgc                                               <  2:239485/100‑1 (MQ=255)
                                                    aGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccgc                                               <  2:452947/100‑1 (MQ=255)
                                                     gTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCa                                              >  2:1712891/1‑100 (MQ=255)
                                                       tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc                                            >  1:1480363/1‑100 (MQ=255)
                                                       tGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATc                                            >  1:262914/1‑100 (MQ=255)
                                                         aaGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCg                                          <  1:1712904/100‑1 (MQ=255)
                                                          aGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGa                                         >  1:502466/1‑100 (MQ=255)
                                                            cacaTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACa                                       >  2:488517/1‑100 (MQ=255)
                                                             cgtaggccggataagacgtggcaagcgtcgcatccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACaa                                      >  1:263458‑M2/39‑100 (MQ=255)
                                                              caTTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt                                     <  2:1418862/100‑1 (MQ=255)
                                                               atcGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATa                                    >  1:258488‑M1/4‑100 (MQ=255)
                                                                ttGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATaa                                   <  1:1752480/100‑1 (MQ=255)
                                                                  gccggataagacgtggcaagcgtcgcatccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac                                 >  1:2243703‑M2/34‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac                                 >  2:774515‑M1/1‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac                                 <  1:2359164‑M1/100‑1 (MQ=255)
                                                                  GCCGGATGCGACGCTTGCCACGTCGTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAac                                 >  2:867598‑M1/1‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAaca                                >  1:1485496‑M1/1‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTGCCACGTATTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAaca                                <  2:450823‑M1/100‑1 (MQ=255)
                                                                    CGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAATAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAacac                               <  1:853403‑M1/100‑1 (MQ=255)
                                                                     ggataagacgtggcaagcgtcgcatccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                              >  1:947047‑M2/31‑100 (MQ=255)
                                                                     ggataagacgtggcaagcgtcgcatccggcCTACGAATACTATGGACTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                              >  1:283891‑M2/31‑100 (MQ=255)
                                                                     GGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                              >  1:794958‑M1/1‑100 (MQ=255)
                                                                     GGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACAcc                              >  2:1748887‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGCATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTa                           >  2:529801‑M1/1‑100 (MQ=255)
                                                                           gACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCt                        >  1:881615/1‑100 (MQ=255)
                                                                              gCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACa                     <  2:262912/100‑1 (MQ=255)
                                                                              gCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACa                     <  1:159141/100‑1 (MQ=255)
                                                                                  gCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACtt                 >  1:1624386/1‑100 (MQ=255)
                                                                                    cACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCa               >  1:689332/1‑100 (MQ=255)
                                                                                    cACGTCTTATCCGGCCTACGAATACTATGGACTAACTTCACGTACTTAGGATAAGGTGTTCTCGCCGCATACGACTATACTCACCTTATCTACAACTTCa               >  2:1642152/1‑100 (MQ=255)
                                                                                      cGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGa             >  2:87046/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtt          <  1:67374/100‑1 (MQ=255)
                                                                                          ttATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAttt         >  1:639314/1‑100 (MQ=255)
                                                                                           tATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttc        <  1:2388405/100‑1 (MQ=255)
                                                                                            atccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttct       <  1:2083931‑M2/93‑1 (MQ=255)
                                                                                             tccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctt      >  2:837230‑M2/7‑100 (MQ=255)
                                                                                              ccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt     >  2:2025994‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttcttt     <  2:480613‑M2/95‑1 (MQ=255)
                                                                                              ccggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctt      <  2:1540621‑M2/94‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  1:741956‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAAgttctttc    >  2:1276242‑M2/5‑100 (MQ=255)
                                                                                               cggcCTACGAATACTATGCATTAACTGCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCTACAATAAACACCTTATCTACAACTTCAGAAtttctttc    <  2:894155‑M2/96‑1 (MQ=255)
                                                                                                 gcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTcac  <  1:570021‑M2/98‑1 (MQ=255)
                                                                                                 gcCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTcac  >  2:1503557‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGAATACGATGGATTAACTTCGCGTGGTTCGGATAAGGCGTTCGCGCCGCATCCGACCATAAACACCTTATCTACAACTTCAGAATTTCTTTca   <  1:1678486‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                 
CGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAATAAACACCTTATCTACAACTTCAGAATTTCTTTCAC  >  NC_000913/2617902‑2618098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.