| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,121,597 | (T)5→4 | coding (151/1332 nt) | hslU ← | molecular chaperone and ATPase component of HslUV protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,121,593 | 0 | T | . | 96.5% | 624.7 / 13.5 | 145 | coding (155/1332 nt) | hslU | molecular chaperone and ATPase component of HslUV protease |
| Reads supporting (aligned to +/- strand): ref base T (1/4); new base . (71/69); total (72/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
TGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCC > NC_000913/4121495‑4121688 | gTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAtttt > 1:135585/1‑100 (MQ=255) tCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttc > 2:2590855/1‑99 (MQ=255) ncTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg > 2:1985775/2‑97 (MQ=255) ncTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg > 2:636903/2‑97 (MQ=255) gCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg > 1:2467326/1‑97 (MQ=255) gCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg < 2:2012707/100‑4 (MQ=255) gCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg < 2:3192982/100‑4 (MQ=255) cTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAtttttggg > 2:1361208/1‑97 (MQ=255) cTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcggg < 2:897149/100‑5 (MQ=255) cTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATAttttcgg > 2:1051035/1‑96 (MQ=255) ttCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCgggg > 1:1720208/1‑100 (MQ=255) tCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGt > 2:2393253/1‑100 (MQ=255) cAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTc < 2:1346104/100‑1 (MQ=255) cAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTc > 2:863624/1‑100 (MQ=255) cAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTGTACCGACACCGGTCGGGCCGATCATCAGGATAttttcggg < 2:2863508/97‑5 (MQ=255) aaCTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCa > 2:1278348/1‑100 (MQ=255) cTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACt > 2:2722013/1‑100 (MQ=255) tttGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACtt < 1:1873184/100‑1 (MQ=255) atgaACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATg < 1:686241/100‑1 (MQ=255) atgaACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATg > 2:1727719/1‑100 (MQ=255) atgaACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATg > 2:2904063/1‑100 (MQ=255) aCGGCGCATTCGCCAGCTTAGCCAGACGACGGGCCATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCGCTTGATGgcgc < 2:1765656/100‑1 (MQ=255) cGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCa > 1:744715/1‑100 (MQ=255) ncgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGc > 2:747378/2‑100 (MQ=255) gcgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGc < 2:2656967/100‑1 (MQ=255) gcgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGc > 1:259874/1‑100 (MQ=255) cgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGct > 1:2280097/1‑100 (MQ=255) cgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGct < 1:2970738/100‑1 (MQ=255) aTTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCtt > 1:3112289/1‑100 (MQ=255) ttCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTc > 2:673546/1‑100 (MQ=255) cGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGt > 2:633458/1‑100 (MQ=255) gCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGtt > 1:604677/1‑100 (MQ=255) ccAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg > 2:1227103/1‑100 (MQ=255) ccAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg < 1:2818884/100‑1 (MQ=255) ccAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg < 1:1218171/100‑1 (MQ=255) ccAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTg < 1:1992464/100‑1 (MQ=255) cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGa < 1:2935488/100‑1 (MQ=255) cAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGa < 1:369930/100‑1 (MQ=255) gCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGc < 2:2306037/100‑1 (MQ=255) gCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGc < 2:201936/100‑1 (MQ=255) ttAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTg < 2:1080877/100‑1 (MQ=255) aGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCa < 1:1840983/100‑1 (MQ=255) gCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCAt > 2:2802761/1‑100 (MQ=255) gCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCAt > 1:3146100/1‑100 (MQ=255) gCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCAt > 2:1117885/1‑100 (MQ=255) aGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCg > 2:1781365/1‑100 (MQ=255) aGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCg > 2:2339225/1‑100 (MQ=255) gacgacGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGa < 2:555768/100‑1 (MQ=255) cgacgGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACg < 1:1841497/100‑1 (MQ=255) acgGGCGATTTCAGTTTTAACGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCACGGTGCAGCTCAACGAAGAGCTGcgccatgaagt < 1:1108443/100‑11 (MQ=21) ggCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGc > 1:2578119/1‑100 (MQ=255) gCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCg < 1:1727724/100‑1 (MQ=255) cGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCgg > 2:376566/1‑100 (MQ=255) cGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCgg < 1:1117886/100‑1 (MQ=255) cGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCgg < 1:2641977/100‑1 (MQ=255) cGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCgg < 2:1720203/100‑1 (MQ=255) gATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGt < 2:2565969/100‑1 (MQ=255) aTTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGtt < 1:2813236/100‑1 (MQ=255) tttCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTa > 2:1122350/1‑100 (MQ=255) ttCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTa < 2:2208933/100‑1 (MQ=255) ttCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTAc > 2:314954/1‑100 (MQ=255) ccgatctccGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCa < 1:648260/93‑1 (MQ=255) aGTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCa < 1:2393264/100‑1 (MQ=255) gTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCag > 2:2952934/1‑100 (MQ=255) gTTTTACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCag < 1:1060487/100‑1 (MQ=255) gTTTTACCGACACCCGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCag < 2:2280086/100‑1 (MQ=255) tttACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCagag > 2:2777026/1‑100 (MQ=255) tctccGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGc < 2:3277669/97‑1 (MQ=255) tACCGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCa > 2:3235041/1‑100 (MQ=255) ccGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCaagatcgg > 2:648259/1‑93 (MQ=255) ccGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCaga > 1:3277687/1‑98 (MQ=255) ccGACACCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAAt > 2:1837922/1‑100 (MQ=255) cacCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGcc > 2:1925765/1‑100 (MQ=255) cacCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGcc < 1:2165586/100‑1 (MQ=255) cacCGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGcc < 1:625894/100‑1 (MQ=255) ccGGTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCcac > 2:2572747/1‑100 (MQ=255) ggTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAg < 2:207634/100‑1 (MQ=255) ggTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAg > 2:975084/1‑100 (MQ=255) gTCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGa > 2:46060/1‑100 (MQ=255) tCGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGaa > 1:2858831/1‑100 (MQ=255) cGGGCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAAc < 2:1276839/100‑1 (MQ=255) gggCCGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACg > 1:1233476/1‑100 (MQ=255) ccGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCtt < 1:1399403/100‑1 (MQ=255) cGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTg > 1:789479/1‑100 (MQ=255) cGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTg < 1:1961844/100‑1 (MQ=255) cGATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTg > 2:2367068/1‑100 (MQ=255) gATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTgg < 1:1053283/100‑1 (MQ=255) gATCATCAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTgg < 1:3079811/100‑1 (MQ=255) atcatcAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGc > 2:2029516/1‑100 (MQ=255) atcatcAGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGc < 1:863626/100‑1 (MQ=255) tcatcaGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCg < 2:2722599/100‑1 (MQ=255) tcatcaGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCg < 1:2722026/100‑1 (MQ=255) tcatcaGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCg < 1:3096391/100‑1 (MQ=255) tcatcaGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCg < 2:2601805/100‑1 (MQ=255) tcaGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTg < 1:3202062/100‑1 (MQ=255) caGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGt > 1:1439963/1‑100 (MQ=255) aGGATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTc > 2:1565547/1‑100 (MQ=255) ggATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTcc > 1:2563201/1‑100 (MQ=255) ggATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTcc > 1:1805554/1‑100 (MQ=255) ggATA‑TTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTcc < 1:314955/100‑1 (MQ=255) | TGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTTACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCC > NC_000913/4121495‑4121688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |