| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 98.7% | 570.6 / ‑0.6 | 158 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (79/77); total (81/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 168 total aligned reads displayed.
TCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866491‑2866682 | cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑c < 1:1877897/100‑1 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccc > 2:253738/1‑99 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccc > 1:1739014/1‑99 (MQ=255) ccTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctg > 1:1679780/1‑97 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 1:2208730/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 1:1580293/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGACTCGCGTGAGACTGGCCTTGCTGACAGATGCTTACGTAGTCACGGAAGAACGACTTGATATTGAG‑c > 2:2963248/1‑92 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTg < 1:196242/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAg < 2:1297219/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGCGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAg < 2:150047/99‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAgg > 1:2472301/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAgg > 2:2468881/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGa > 2:2889067/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGAt > 1:15433/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGAtt < 1:43589/100‑1 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGAttt < 2:221466/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcg > 2:1855173/1‑100 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTcgc < 2:1117236/100‑1 (MQ=255) gCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCaaa > 1:1862532/1‑100 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACg < 2:3261975/100‑1 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGgc > 2:723207/1‑99 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGgcg > 2:723015/1‑100 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 2:1749459/100‑1 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 1:1360471/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCTATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:84191/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:285132/100‑1 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 2:278480/1‑100 (MQ=255) cTTGAGAATGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 1:1771314/1‑100 (MQ=255) cTTAAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 2:2509219/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 2:1313589/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt < 1:1658172/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt < 2:1031055/100‑1 (MQ=255) gaggcTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:1143590/96‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAATGGCGCAGGCCTTc < 1:576340/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 1:644613/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:2423158/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 2:2373670/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:2749004/1‑100 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa > 1:1109637/1‑100 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 1:2134646/100‑1 (MQ=255) ntGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 1:152850/2‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:3094266/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:1580289/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:1403849/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:1675493/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt < 2:1918602/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:3009175/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:407308/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:825702/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:42638/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:2913610/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg < 2:3087227/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:1394729/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg < 2:1605611/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:942567/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 1:2680926/1‑100 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:2059170/99‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaa > 2:21651/1‑99 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:489738/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 1:525089/100‑1 (MQ=255) aTGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAaca > 1:1172161/1‑100 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 1:2331058/1‑100 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 1:2383948/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 2:2858255/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:786656/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:3257983/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 2:1739009/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 2:592343/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 2:525394/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:2440372/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:1515377/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt < 1:253739/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:2892252/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAGCTGGCGAACACGTTCACGGGTg < 2:1943388/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:2595876/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:601845/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAG‑CCACCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1214064/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:1421361/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:564215/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:1172158/100‑1 (MQ=255) ggAGCAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 2:2431040/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:3098622/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 2:202578/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc > 2:508423/1‑100 (MQ=255) cAGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt < 2:2317227/100‑1 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 1:134258/1‑100 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 2:2456144/100‑1 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 2:1297047/100‑1 (MQ=255) aGCGCTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:298463/1‑100 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:2208719/100‑1 (MQ=255) gcTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 1:3027418/1‑100 (MQ=255) cTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1507563/100‑1 (MQ=255) cTTCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:3198239/100‑1 (MQ=255) tCGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 1:2945562/1‑100 (MQ=255) cGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc > 2:2284062/1‑100 (MQ=255) cGATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc > 2:2319170/1‑100 (MQ=255) gATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:1941475/1‑100 (MQ=255) gATATTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 2:2423147/100‑1 (MQ=255) atatTCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 2:794140/100‑1 (MQ=255) ttCAGCCC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:2079958/1‑100 (MQ=255) | TCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866491‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |