Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,706,0480GT32.5% 476.5 / 251.6 252intergenic (‑258/+50)dppB/dppAdipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
Reads supporting (aligned to +/- strand):  ref base G (71/91);  new base T (77/1);  total (159/93)
Fisher's exact test for biased strand distribution p-value = 1.25e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01

Only 100 of 254 total aligned reads displayed.

GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705950‑3706147
                                                                                                          |                                                                                                   
   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                                                 <  1:1544037/100‑1 (MQ=255)
       gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc                                                                                             <  2:349710/100‑1 (MQ=255)
       gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc                                                                                             >  2:1326802/1‑100 (MQ=255)
        tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCa                                                                                            >  1:2613621/6‑100 (MQ=21)
         ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg                                                                                           >  1:1336780/1‑100 (MQ=255)
         gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg                                                                                           >  1:841995/5‑100 (MQ=17)
         gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AGAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg                                                                                           >  2:1654854/5‑100 (MQ=17)
         gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg                                                                                           >  1:2292466/5‑100 (MQ=18)
          taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                          >  1:1189328/4‑100 (MQ=18)
           aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:602221/3‑100 (MQ=18)
           aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAATGTGCAAATTCAATAAATTGC‑‑‑AAT‑TCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg                                                                                          >  1:2498707/3‑100 (MQ=21)
           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  1:1277869/3‑100 (MQ=18)
           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  1:50031/3‑100 (MQ=18)
           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑ATA‑T‑‑‑GAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGcg                                                                                        >  1:1298502/3‑99 (MQ=21)
           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGc                                                                                         >  1:883459/3‑100 (MQ=21)
           aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                                                         >  2:1592886/3‑100 (MQ=18)
            tGCCGGATGCTGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGGGCAAAGTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa                                                                                        >  2:2675484/1‑100 (MQ=255)
            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑ATCT‑T‑‑‑CTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCa                                                                                        >  2:1384646/2‑100 (MQ=18)
            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑ATCT‑T‑‑‑CTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCa                                                                                        >  1:2145711/2‑100 (MQ=18)
            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAATCCTTGCGAATTCAATATATTGTATGGAA‑A‑‑‑TTC‑‑‑‑AGGCCTGATAAGCGTAGCGCATCAGGctt                                                                                       >  2:1444908/2‑98 (MQ=21)
            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CCAT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  1:3014478/2‑100 (MQ=21)
            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                        >  2:1589755/2‑100 (MQ=18)
            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑A‑‑‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCa                                                                                        >  2:2893934/2‑100 (MQ=18)
            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GGGA‑C‑‑‑TAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCa                                                                                        >  1:1928235/2‑100 (MQ=18)
             gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt                                                                                       >  1:2021114/1‑100 (MQ=255)
             gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt                                                                                      >  1:3315229/1‑100 (MQ=18)
             gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag                                                                                       >  1:2568400/1‑99 (MQ=18)
             gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑‑AAT‑T‑‑‑CTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGctg                                                                                       >  2:2139614/1‑98 (MQ=18)
             gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag                                                                                       >  2:3344299/1‑99 (MQ=18)
             gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgagat                                                                                       >  2:1892466/1‑96 (MQ=21)
              ccggataaggcgTTCACGCCGCATCCTGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt                                                                                      >  1:2231219/9‑98 (MQ=21)
              ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑A‑‑‑CAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCagt                                                                                      >  1:711442/9‑98 (MQ=18)
              ccggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                                                      >  2:258769/9‑100 (MQ=18)
              ccggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                                                      >  2:1004278/9‑100 (MQ=18)
              ccGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt                                                                                      >  2:310193/1‑98 (MQ=17)
                ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc                                                                                   >  1:1130178/7‑98 (MQ=21)
                ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                                                    >  2:3106379/7‑100 (MQ=18)
                ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGGGC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt                                                                                    >  2:2383002/7‑100 (MQ=18)
                ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                                                    >  1:2872317/7‑100 (MQ=17)
                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct                                                                                    >  2:2172710/7‑96 (MQ=21)
                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GGGA‑C‑‑‑TAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt                                                                                    >  1:749690/7‑96 (MQ=18)
                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGA‑T‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt                                                                                    >  1:1205073/7‑100 (MQ=17)
                 gataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑T‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat                                                                                   >  1:1215784/6‑97 (MQ=21)
                  ataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatctta                                                                                  >  1:577317/5‑94 (MQ=25)
                   tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                                                 >  1:610893/1‑100 (MQ=255)
                    gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GACT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc                                                                                >  2:783277/1‑100 (MQ=255)
                    gcggcgTTAACAGGGTATCCGGCTTAT‑AATATCGTGCAAATTCAAGACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                                                 <  2:3032259/99‑1 (MQ=18)
                      ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt                                                                              <  1:2957401/100‑1 (MQ=255)
                        cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg                                                                            <  1:1103449/100‑1 (MQ=255)
                         gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgn                                                                           <  1:3070430/100‑2 (MQ=255)
                             aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAtn                                                                       <  2:3294518/100‑2 (MQ=255)
                                 cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc                                                                   <  1:380573/100‑1 (MQ=255)
                                    aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg                                                                >  2:801935/1‑100 (MQ=255)
                                      ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa                                                              >  2:2553423/1‑100 (MQ=255)
                                       cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt                                                             <  1:2759549/100‑1 (MQ=255)
                                       cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt                                                             >  1:1743919/1‑100 (MQ=255)
                                          ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc                                                          <  1:3216766/100‑1 (MQ=255)
                                            tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt                                                        >  1:3325570/1‑100 (MQ=255)
                                             aC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt                                                       <  1:1640684/100‑1 (MQ=255)
                                             aC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt                                                       <  2:1930126/100‑1 (MQ=255)
                                              c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:124775/100‑1 (MQ=255)
                                              c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:282578/100‑1 (MQ=255)
                                              c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:495292/100‑1 (MQ=255)
                                              c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGAGAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                                                      <  1:1009354/100‑1 (MQ=255)
                                                aaaaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa                                                     <  2:1768776/100‑1 (MQ=255)
                                                 aaaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa                                                    <  2:15593/100‑1 (MQ=255)
                                                  aaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat                                                   <  2:2495527/100‑1 (MQ=255)
                                                     cGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat                                                <  2:3352237/100‑1 (MQ=255)
                                                     cGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat                                                >  2:1045536/1‑100 (MQ=255)
                                                        gCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             >  2:1134816/1‑100 (MQ=255)
                                                        gCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg                                             <  2:58312/100‑1 (MQ=255)
                                                         cAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa                                            <  2:3218608/100‑1 (MQ=255)
                                                         cAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa                                            <  1:1510994/100‑1 (MQ=255)
                                                          aaaTTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt                                           <  1:3298475/100‑1 (MQ=255)
                                                           aaTTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa                                          <  1:181038/100‑1 (MQ=255)
                                                           aaTTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa                                          <  2:2539611/100‑1 (MQ=255)
                                                            aTTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         >  2:2108375/1‑100 (MQ=255)
                                                            aTTCAATACATGGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag                                         <  1:783279/100‑1 (MQ=255)
                                                               cAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGGCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga                                      >  2:2257189/1‑100 (MQ=255)
                                                               cAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga                                      <  2:2654874/100‑1 (MQ=255)
                                                                   aCATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtt                                  >  1:2430293/1‑100 (MQ=255)
                                                                     aTTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtttt                                >  1:146878/1‑100 (MQ=255)
                                                                        gCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa                             >  1:1150073/1‑100 (MQ=255)
                                                                        gCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa                             <  2:1597694/100‑1 (MQ=255)
                                                                         cA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            <  2:203147/100‑1 (MQ=255)
                                                                         cA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa                            >  2:517393/1‑100 (MQ=255)
                                                                          a‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCTTTTTTGCCTTTGCCATCAGCCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg                           <  2:1831181/100‑1 (MQ=255)
                                                                          a‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg                           <  1:1407777/100‑1 (MQ=255)
                                                                            gAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt                          >  2:883687/1‑100 (MQ=255)
                                                                             aaT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg                         <  2:1499412/100‑1 (MQ=255)
                                                                                          gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg                  >  1:1574102/1‑100 (MQ=255)
                                                                                             ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt               >  1:2039887/1‑100 (MQ=255)
                                                                                             ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt               >  1:1036857/1‑100 (MQ=255)
                                                                                                 tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg           <  2:1149376/100‑1 (MQ=255)
                                                                                                    tAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAt        >  1:196392/1‑100 (MQ=255)
                                                                                                      aGCGGAGCGCATCAGGCATTTTTTTTTTTTTTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa      >  2:1229689/1‑100 (MQ=255)
                                                                                                      aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa      >  2:1495073/1‑100 (MQ=255)
                                                                                                       gCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCaa     <  2:729795/100‑1 (MQ=255)
                                                                                                       gCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCaa     >  1:1608327/1‑100 (MQ=255)
                                                                                                         ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc   <  2:184656/100‑1 (MQ=255)
                                                                                                          |                                                                                                   
GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA  >  NC_000913/3705950‑3706147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑