| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,077,116 | T→C | E589E (GAA→GAG) | putA ← | fused DNA‑binding transcriptional regulator/proline dehydrogenase/pyrroline‑5‑carboxylate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,077,116 | 0 | T | C | 98.4% | 444.0 / ‑3.1 | 127 | E589E (GAA→GAG) | putA | fused DNA‑binding transcriptional regulator/proline dehydrogenase/pyrroline‑5‑carboxylate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (50/75); total (51/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
AGCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTTTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGTTTTCCAG > NC_000913/1077018‑1077211 | aGCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGtttt > 2:1173580/1‑99 (MQ=255) gCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTtctc > 2:719144/1‑100 (MQ=255) gCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTtctc < 2:2698648/100‑1 (MQ=255) gCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTtctc > 2:1044874/1‑100 (MQ=255) cccTGCCGTGTTGTCGCGCCCGTGACCGTAAGGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTctct < 2:1810908/100‑1 (MQ=255) cccTGCCGAGTTGTCGCGCCTGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTTTCt < 1:891558/100‑1 (MQ=255) cccTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTctct < 2:3302906/100‑1 (MQ=255) cgatctgAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTa < 2:1709531/94‑1 (MQ=255) ccTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTa < 2:818177/100‑1 (MQ=255) ccTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTa < 2:2458027/100‑1 (MQ=255) tGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTAca < 2:958636/100‑1 (MQ=255) gCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTagat > 1:390132/1‑97 (MQ=255) gCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTAcag > 1:1579730/1‑100 (MQ=255) ccGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTAcagc < 2:2115198/100‑1 (MQ=255) gAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTaagatcg > 1:1709536/1‑94 (MQ=255) gAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTAcagcag > 2:2319783/1‑100 (MQ=255) gAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTAcagcag < 2:2384844/100‑1 (MQ=255) tGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGAc > 2:2434724/1‑100 (MQ=255) tGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGAc < 2:1018812/100‑1 (MQ=255) gTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGAcc > 1:2424217/1‑100 (MQ=255) gTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGAcc < 2:1643090/100‑1 (MQ=255) gTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGAcc > 1:189492/1‑100 (MQ=255) tCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCg < 1:1874693/100‑1 (MQ=255) tCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCg < 2:689668/100‑1 (MQ=255) ncgcgCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCg > 1:1523189/2‑100 (MQ=255) gcgcCCGTGACCGTAAAGATCGCGCGGCAGGGGAGTTTTCGGATGCGGTAATCCAGTTTGCCATTCCTGTTGCGCCAGGTTCGCTACAGCAGTGAcgg > 2:2881259/1‑96 (MQ=255) cgcCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGAt > 1:2295724/1‑100 (MQ=255) cccGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCg < 1:311723/100‑1 (MQ=255) cccGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCg < 1:3208095/100‑1 (MQ=255) gTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCg < 1:2637821/100‑1 (MQ=255) gTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCg < 2:1727040/100‑1 (MQ=255) aCCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGAcc < 1:315106/100‑1 (MQ=255) ccGTAAAGATCGCGCGGCAGGGGGCTTTTCGGATGCGGTAATCCAGTTGGACCTTCCTGTTGCGGCCGTTTCTCTACAGCAGGGACCGGATCGGCg > 2:547282/1‑96 (MQ=255) ccGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCa > 2:2413388/1‑100 (MQ=255) cGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAg < 2:2956069/100‑1 (MQ=255) cGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAg > 2:1164814/1‑100 (MQ=255) cGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAg > 1:531826/1‑100 (MQ=255) aGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCAt > 1:242712/1‑100 (MQ=255) aTCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATcc < 1:406788/100‑1 (MQ=255) tCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCa < 1:911947/100‑1 (MQ=255) gcgGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGTGACCAGTTCATCCAGTgg > 2:2816232/1‑100 (MQ=255) gcgGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTgg < 1:2006088/100‑1 (MQ=255) gcgGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTgg < 1:101501/100‑1 (MQ=255) cgGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGc < 2:168200/100‑1 (MQ=255) gCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCaa > 1:729700/1‑100 (MQ=255) ggggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAaga < 1:1314859/100‑1 (MQ=255) ggggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAaga < 1:704454/100‑1 (MQ=255) gggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAagag < 1:2500216/100‑1 (MQ=255) ggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAgg > 1:1055661/1‑100 (MQ=255) ggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAgg > 2:1576002/1‑100 (MQ=255) ggAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAgg < 1:602741/100‑1 (MQ=255) gAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAggn < 2:1523185/100‑2 (MQ=255) aaTTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGgtg < 2:842855/100‑1 (MQ=255) aTTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGgtgt > 2:2339956/1‑100 (MQ=255) ttttCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTc > 2:3328229/1‑100 (MQ=255) tttCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCATTTTCTCTACAGCAGTGACCGTATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCg < 1:2694736/100‑1 (MQ=255) tCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGTGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAATGAGCTGTCGGc < 2:1767407/100‑1 (MQ=255) tCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGc < 2:1212831/100‑1 (MQ=255) tCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGc < 2:2817346/100‑1 (MQ=255) cGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCa < 2:2290337/100‑1 (MQ=255) ggATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCaa < 1:2434735/100‑1 (MQ=255) gATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCa < 1:3134801/98‑1 (MQ=255) aTGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGATCATCCAGTGGCAAAGAGGTGTCGGCAATa > 1:3004767/1‑100 (MQ=255) tGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATTCAGTGGCAAAGAGGTGTCGGCAATAc < 1:2044825/100‑1 (MQ=255) tGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATAc < 1:746055/100‑1 (MQ=255) cGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACgg > 2:211660/1‑100 (MQ=255) cGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACgg > 2:2531710/1‑100 (MQ=255) ggTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGGTCAGCCAGTGGCAAAGAGGTGTCGGCAATACGGt > 1:991337/1‑100 (MQ=255) tAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTa < 1:2462984/100‑1 (MQ=255) aaTCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTa < 2:2130046/99‑1 (MQ=255) aTCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAAc > 2:438321/1‑100 (MQ=255) aTCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAAc > 1:3258877/1‑100 (MQ=255) tCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACa < 2:1060481/100‑1 (MQ=255) tCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACa > 1:876310/1‑100 (MQ=255) tCCAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACa < 1:766777/100‑1 (MQ=255) cAGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGGTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACaa > 1:1501460/1‑99 (MQ=255) aGTTTGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAAc > 2:2986319/1‑100 (MQ=255) ttgaccTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAg < 1:296402/96‑1 (MQ=255) ttGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAg < 2:876308/100‑1 (MQ=255) tGCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAgg < 1:2841908/100‑1 (MQ=255) gCCCTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGgt > 1:1409005/1‑100 (MQ=255) cccTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGgtg < 1:977643/100‑1 (MQ=255) cTTCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGtt < 2:546449/100‑1 (MQ=255) ttCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTa < 1:2319794/100‑1 (MQ=255) ttCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTa < 2:1820020/100‑1 (MQ=255) ttCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTa < 1:2413399/100‑1 (MQ=255) ttCCTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCAAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGtt < 2:638238/99‑1 (MQ=255) cTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGATCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAg < 2:784066/98‑1 (MQ=255) cTGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCa > 1:497999/1‑100 (MQ=255) tGTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCAc > 1:1419321/1‑100 (MQ=255) gTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCAcc < 2:337111/100‑1 (MQ=255) gTTGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCAcc > 1:3080358/1‑100 (MQ=255) tGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGt < 2:1579726/100‑1 (MQ=255) tGCGCCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGt > 1:335864/1‑100 (MQ=255) gcgcCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGtt > 2:224500/1‑100 (MQ=255) cgcCAGTTTTTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGtt > 2:1932891/1‑99 (MQ=255) cgcCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCACCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGttt < 1:1784018/100‑1 (MQ=255) gcCAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGtttt < 1:1554652/100‑1 (MQ=255) cAGTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGTTTTcc < 1:224501/100‑1 (MQ=255) gTTTCTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGTTTTCcag < 2:1757250/100‑1 (MQ=255) | AGCCCTGCCGAGTTGTCGCGCCCGTGACCGTAAAGATCGCGCGGCAGGGGAATTTTCGGATGCGGTAATCCAGTTTGCCCTTCCTGTTGCGCCAGTTTTTCTACAGCAGTGACCGGATCGGCGACCAGTTCATCCAGTGGCAAAGAGGTGTCGGCAATACGGTTAACAAACGAGGTGTTAGCACCGTTTTCCAG > NC_000913/1077018‑1077211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |