Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,446,362 Δ1 bp 17.5% intergenic (+156/+16) ydbL → / ← feaR DUF1318 family protein/transcriptional activator for tynA and feaB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,446,3620A.17.5% 287.9 / 58.4 103intergenic (+156/+16)ydbL/feaRDUF1318 family protein/transcriptional activator for tynA and feaB
Reads supporting (aligned to +/- strand):  ref base A (44/40);  new base . (10/8);  total (54/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 105 total aligned reads displayed.

TGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAA  >  NC_000913/1446264‑1446461
                                                                                                   |                                                                                                   
tGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACan                                                                                                    <  1:2328079/100‑2 (MQ=255)
tGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACAt                                                                                                    <  2:3175660/100‑1 (MQ=255)
tGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTATGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACAt                                                                                                    >  1:2587718/1‑100 (MQ=255)
  aaaCAAGGTGAATATTCAAAATCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACAt                                                                                                    <  1:3105909/98‑1 (MQ=255)
    aCAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCaa                                                                                                <  1:1035547/100‑1 (MQ=255)
     cAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAAc                                                                                               <  2:25771/100‑1 (MQ=39)
     cAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAAc                                                                                               >  2:352090/1‑100 (MQ=255)
      aaGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAACg                                                                                              <  1:59030/100‑1 (MQ=38)
       aGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAACGc                                                                                             <  1:2345498/100‑1 (MQ=38)
        ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAACGcc                                                                                            <  1:2191964/100‑1 (MQ=38)
        ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGcc                                                                                            <  2:3679079/100‑1 (MQ=255)
        ggTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTACCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAACGcc                                                                                            <  2:2659699/100‑1 (MQ=38)
         gTGAATATTCAAAAACTCCTGTCATATTGCATTTTGCCCTGATAAATTCATATTCATATATCTTTTTTAACTACTTGGCGTTGCAGTACATGCatc                                                                                               <  2:3090401/96‑3 (MQ=255)
           gAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAAt                                                                                         <  1:2640291/100‑1 (MQ=255)
           gAATATAAAAAAATTCTTGTCAAATTGCTTTTTGACCTAAAAAATGCATCCTCAAATATCTCTTTAAACTAATTGGCGTTGCAGTACTTGCAACGCCa                                                                                           <  2:1088691/98‑1 (MQ=255)
            aaTATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAAtt                                                                                        <  2:34420/100‑1 (MQ=255)
                ttCAAAAACTCCTGTCAAATTGCCTTTTTCCCTGAAAAATTCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGGACTGCAACGCCAAttagt                                                                                     <  2:3790533/99‑1 (MQ=25)
                ttCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAAttagtt                                                                                    >  2:2565789/1‑100 (MQ=255)
                ttCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAAttagtt                                                                                    >  2:3362742/1‑100 (MQ=255)
                  cAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAAttagttag                                                                                  >  1:3657348/1‑100 (MQ=255)
                   aaaagCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCATGTACTGCAACGCCAAttagttaa                                                                                  <  2:1341723/99‑2 (MQ=25)
                   aaaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGc                                                                                 >  1:151965/1‑100 (MQ=255)
                    aaaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCg                                                                                <  1:3198414/100‑1 (MQ=255)
                     aaaCTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCCGTTTTAACTAATTGGCGTTGCAATACATGCAAAGCCCATTAATTAGCgg                                                                               >  2:2159595/1‑100 (MQ=255)
                          ccTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAAttt                                                                          <  2:399221/100‑1 (MQ=255)
                              tCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGt                                                                      >  1:1835554/1‑100 (MQ=255)
                               cAAATTTCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTc                                                                     <  2:2937453/100‑1 (MQ=255)
                               cAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTc                                                                     >  1:260704/1‑100 (MQ=255)
                                 aaTTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGa                                                                   >  1:2564904/1‑100 (MQ=255)
                                  aTTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGAt                                                                  <  2:1182944/100‑1 (MQ=255)
                                   ttGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATa                                                                 >  2:742685/1‑100 (MQ=255)
                                        ttttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGc                                                            >  2:456132/1‑100 (MQ=255)
                                        ttttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGc                                                            <  1:3362768/100‑1 (MQ=255)
                                        ttttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGc                                                            <  1:1906781/100‑1 (MQ=255)
                                         tttGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGcc                                                           >  1:2814346/1‑100 (MQ=255)
                                            gCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCt                                                          >  2:3380917/1‑98 (MQ=255)
                                             cccTGAAAAATGCATAGTAAAATATCTGTTTTAACTAATTGGCGTAGCAGTACATGCAACGCCTATTAGTTAGCGGAATTTACGTCGAGACTCTcc                                                           >  2:1265809/1‑96 (MQ=255)
                                              ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg                                                      <  2:1954369/100‑1 (MQ=255)
                                              ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg                                                      <  1:2307984/100‑1 (MQ=255)
                                              ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg                                                      >  1:1909312/1‑100 (MQ=255)
                                              ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg                                                      <  1:1692292/100‑1 (MQ=255)
                                              ccTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCg                                                      >  2:1768541/1‑100 (MQ=255)
                                                tGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTc                                                    >  2:102822/1‑100 (MQ=255)
                                                 gAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTc                                                    >  2:2418760/1‑99 (MQ=255)
                                                   aaaaTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATc                                                 <  1:2549519/100‑1 (MQ=255)
                                                   aaaaTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTAGCAGTACATGCAACGCCAATCAGTTAGCGGAATTTACGTCGATACTCGCCTGGGGt                                                     >  2:1880771/1‑96 (MQ=255)
                                                     aaTGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATccc                                               <  2:679305/100‑1 (MQ=255)
                                                         cATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAg                                           >  1:2899238/1‑100 (MQ=255)
                                                          aTAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGc                                          >  2:1485099/1‑100 (MQ=255)
                                                          aTAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGc                                          <  1:2061105/100‑1 (MQ=255)
                                                           tAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTATCGGCATTTACGTCTATACTCCCCTGTCGTTATCCCAAAgtg                                         >  2:1630087/1‑98 (MQ=37)
                                                           tAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCg                                         <  1:59482/100‑1 (MQ=255)
                                                             gTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGtt                                       <  1:3065087/100‑1 (MQ=255)
                                                              tCAAATATCTGTTTTGACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTg                                      <  1:3764253/100‑1 (MQ=255)
                                                               cAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc                                     >  1:3703894/1‑100 (MQ=255)
                                                               cAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc                                     <  2:1567191/100‑1 (MQ=255)
                                                               cAAATATCTGTTTTAACTAATTGGCGTTGCAGTACAGGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGc                                     <  1:1270057/100‑1 (MQ=255)
                                                                 aaTATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCtt                                   <  2:2564887/100‑1 (MQ=255)
                                                                   tatCTGTTTTAACTAATTGGCGTTGCAGTACATAAAACGCCTATTAGTTAGCAGTATTTACATCGATACCCCCCAGGCGTCAACCCAAAGCGt                                        >  2:1687317/1‑93 (MQ=255)
                                                                     tCTGTTTTAACTAATTGGCGTTGCAGTACATGAAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAAt                               <  1:2565806/100‑1 (MQ=255)
                                                                       tGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATa                              >  2:479484/1‑99 (MQ=255)
                                                                        gTTTTAACTGATGGGCGTTGCAGTAAATGCAACGCCCATGAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGGCATCCCAAAGCGTTGCTTAAATa                              <  2:3414192/98‑1 (MQ=255)
                                                                        gTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATAcc                            >  1:3441897/1‑100 (MQ=255)
                                                                           ttAACTAATTGGCTTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGtt                         <  1:3065446/100‑1 (MQ=255)
                                                                           ttAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGtt                         >  2:3404551/1‑100 (MQ=255)
                                                                            tAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTg                        >  1:2191767/1‑100 (MQ=255)
                                                                             aaCTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGa                       >  2:2380562/1‑100 (MQ=255)
                                                                                tAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaa                    >  1:3654457/1‑100 (MQ=255)
                                                                                tAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaa                    <  2:2530711/100‑1 (MQ=255)
                                                                                tAATTGGCGTTGCAGTACATGAAACCCCAATTAGTTCGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaa                     <  2:2517715/99‑1 (MQ=255)
                                                                                 aaTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaaa                   >  1:306018/1‑100 (MQ=255)
                                                                                 aaTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaaa                   >  2:3079679/1‑100 (MQ=255)
                                                                                 aaTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGaaaaa                   <  1:2879625/100‑1 (MQ=255)
                                                                                  aTTGGCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt                  >  1:1885326/1‑100 (MQ=38)
                                                                                  aTTGGCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt                  >  2:69705/1‑100 (MQ=38)
                                                                                  aTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt                  >  2:2025366/1‑100 (MQ=255)
                                                                                  aTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAAt                  >  2:1958267/1‑100 (MQ=255)
                                                                                  aTTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGACGATACTCGCCTGGCGTCATCCCAAAGCGTTGATTACATACAGTTGAAAAAt                  >  1:414771/1‑100 (MQ=255)
                                                                                   ttGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATg                 <  2:3098103/100‑1 (MQ=255)
                                                                                   ttGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATg                 <  1:2173268/100‑1 (MQ=255)
                                                                                    tGGCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGa                >  1:2090322/1‑100 (MQ=38)
                                                                                     ggCGTTGCATGTACTGCAACGCCTATTAGTTAGCGGAATTTACTTCGATACTCGCCTTGCGTCATCCCAAAGCTTTGCTTAAATACCGATGAAAAATGAc               >  2:1669320/1‑100 (MQ=37)
                                                                                     ggCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTATATACCGTTGAAAAATGAc               >  2:2163036/1‑100 (MQ=38)
                                                                                     ggCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  2:3733127/1‑100 (MQ=38)
                                                                                     ggCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  2:1760565/1‑100 (MQ=38)
                                                                                     ggCGTTGCATGTACTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  1:1347847/1‑100 (MQ=38)
                                                                                     ggCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  1:2437951/1‑100 (MQ=255)
                                                                                     ggCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  1:728621/1‑100 (MQ=255)
                                                                                     ggCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGAc               >  1:2436925/1‑100 (MQ=255)
                                                                                      gCGTTGCAGTACATGCAACGCCAATTAGTTAGCGCAATTTACGTCGATACTCGCCTGGCGTCATCCCAAACCGTTGCTTAAATACCGTTGAAAAATGAc               <  2:1270824/99‑1 (MQ=255)
                                                                                          tGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTgg          <  2:2845547/100‑1 (MQ=255)
                                                                                          tGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTgg          >  1:3161749/1‑100 (MQ=255)
                                                                                           gCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGt         <  1:3404577/100‑1 (MQ=255)
                                                                                            cAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTc        <  1:3351679/100‑1 (MQ=255)
                                                                                               gTACATGCAACGCCAATTAGTTAGCGGAATTTATGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAg      >  2:640665/1‑100 (MQ=255)
                                                                                                tACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGa     <  1:3489611/100‑1 (MQ=255)
                                                                                                tACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGa     <  1:352092/100‑1 (MQ=255)
                                                                                                tACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGa     >  1:2734190/1‑100 (MQ=255)
                                                                                                 aCATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGaa    <  2:1842279/100‑1 (MQ=255)
                                                                                                   aTGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGATTAAAAAAAAAAAAAAAATGACTCTGGTCAGaaaa  <  2:2372949/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGAAACAAGGTGAATATTCAAAAACTCCTGTCAAATTGCCTTTTGCCCTGAAAAATGCATAGTCAAATATCTGTTTTAACTAATTGGCGTTGCAGTACATGCAACGCCAATTAGTTAGCGGAATTTACGTCGATACTCGCCTGGCGTCATCCCAAAGCGTTGCTTAAATACCGTTGAAAAATGACTCTGGTCAGAAAA  >  NC_000913/1446264‑1446461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: