Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,609,555 Δ1 bp 15.0% coding (1126/1452 nt) uxaB ← altronate oxidoreductase, NAD‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,609,5550G.15.0% 396.9 / 68.8 133coding (1126/1452 nt)uxaBaltronate oxidoreductase, NAD‑dependent
Reads supporting (aligned to +/- strand):  ref base G (55/57);  new base . (13/7);  total (69/64)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.69e-01

Only 100 of 146 total aligned reads displayed.

ATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGA  >  NC_000913/1609456‑1609653
                                                                                                   |                                                                                                   
atGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcag                                                                                                     <  1:2749165/100‑1 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCCATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                   >  2:1467179/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                   >  1:1935118/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGAAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                   >  2:511365/1‑100 (MQ=255)
   tttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagcag                                                                                                  <  2:2294092/100‑1 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                 >  1:2984453/1‑100 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATCCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                 >  2:2034792/1‑100 (MQ=255)
      cGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg                                                                                               <  1:3249130/100‑1 (MQ=255)
      cGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg                                                                                               <  2:2826897/100‑1 (MQ=255)
         cGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTgg                                                                                           >  2:1723908/1‑100 (MQ=255)
          gTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCACAGCtgctggc                                                                                          <  1:3598927/100‑6 (MQ=255)
             aCGCTCACCACGATAGCACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAgg                                                                                       <  2:2228783/100‑1 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGa                                                                                      >  1:1681185/1‑100 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGa                                                                                      >  1:3369840/1‑100 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCACAGCTGCTGGCAggg                                                                                      <  1:472874/100‑2 (MQ=255)
               gCTCACCACGATAGAACGCAATGAACGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGGGCCGTTTGCCTTCTGCCCTGCCACAGCTGCTGGCAgggc                                                                                     <  2:2652691/100‑3 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGAt                                                                                     >  1:1452045/1‑100 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAACAGCTGTGGCAGGAt                                                                                     >  1:3770376/1‑100 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCACAGCTGCTGGCAgggc                                                                                     <  1:2825727/100‑3 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCACAGCTGCTGGCAgggc                                                                                     <  1:2123553/100‑3 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCACAGCTGCTGGCAgggc                                                                                     <  2:2206831/100‑3 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGATTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGAt                                                                                     >  2:2431524/1‑100 (MQ=255)
                cTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAgggca                                                                                    <  1:2760308/100‑4 (MQ=255)
                  caccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCg                                                                                  >  2:3310501/1‑100 (MQ=255)
                  caccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCg                                                                                  >  2:702381/1‑100 (MQ=255)
                  caccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCg                                                                                  <  1:432793/100‑1 (MQ=255)
                  caccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCg                                                                                  >  2:431282/1‑100 (MQ=255)
                    ccagGATAGAACGCAATCAATGGCGCTAATGCGAAAGTAACCCGCGCCGGAAGCGCGCCGTTTGCCCTCTGCCCTGCCAGCAGATGTGGCAGGATGCggg                                                                                <  2:1253758/100‑1 (MQ=255)
                    ccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCggg                                                                                <  2:866178/100‑1 (MQ=255)
                    ccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCggg                                                                                <  1:1270028/100‑1 (MQ=255)
                      agcgggaaaCGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTg                                                                              <  1:899128/93‑1 (MQ=255)
                      acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTg                                                                              >  2:3238986/1‑100 (MQ=255)
                       cGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGtcc                                                                             >  2:2317496/1‑98 (MQ=255)
                        gATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCg                                                                            <  1:1164442/100‑1 (MQ=255)
                          tAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGa                                                                          <  1:744511/100‑1 (MQ=255)
                           aGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGaa                                                                         >  2:1432312/1‑100 (MQ=255)
                            gAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAAc                                                                        <  1:2294258/100‑1 (MQ=255)
                             aaCGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACt                                                                       >  2:1120016/1‑100 (MQ=255)
                              aCGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACtt                                                                      >  2:542525/1‑100 (MQ=255)
                              aCGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACtt                                                                      >  1:1677951/1‑100 (MQ=255)
                               cGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACtt                                                                      >  1:877026/1‑99 (MQ=255)
                               cGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTg                                                                     <  2:1628483/100‑1 (MQ=255)
                                gCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTgg                                                                    <  2:984929/100‑1 (MQ=255)
                                 caatcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGt                                                                   <  1:1851463/100‑1 (MQ=255)
                                  aatcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTc                                                                  <  1:2795720/100‑1 (MQ=255)
                                     caatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATa                                                               >  1:1524362/1‑100 (MQ=255)
                                     caatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATa                                                               <  2:1613026/100‑1 (MQ=255)
                                           cGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                         <  1:1413262/100‑1 (MQ=255)
                                           cGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                         <  2:1210024/100‑1 (MQ=255)
                                             cTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAg                                                       <  1:520880/100‑1 (MQ=255)
                                               aaTGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAgcg                                                     >  2:133112/1‑100 (MQ=255)
                                                 tGCGAAAGTAAGGCGCGCCGGATGTGTGCCGTTTGCCTTCTGCCCTGGCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                   <  2:2581552/100‑1 (MQ=255)
                                                 tGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                   >  2:1016625/1‑100 (MQ=255)
                                                 tGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGcgcg                                                   >  2:1507859/1‑100 (MQ=255)
                                                   ctaaaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                 >  1:2595068/3‑100 (MQ=255)
                                                   cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                 >  1:2967171/1‑100 (MQ=255)
                                                   cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                 >  2:2106814/1‑100 (MQ=255)
                                                    gAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGTGCGATa                                                <  2:977499/100‑1 (MQ=255)
                                                    gAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTATGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATCCCGTTGAGCGCGATa                                                >  1:310664/1‑100 (MQ=255)
                                                     aaaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAg                                               <  2:1092061/100‑1 (MQ=255)
                                                        gTAAGGCGCGCCGGAAGTGTGCCGTTTGCCGTCTGCCCTGCCGGCAGCGGTGGCAGGATGCGGGTGCGGAACTTGGTCATCCCGTTGCGCGCGATAGAca                                            <  2:3395912/100‑1 (MQ=255)
                                                           aGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagca                                         >  1:3707053/1‑100 (MQ=255)
                                                            ggCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagcag                                        >  1:1948711/1‑100 (MQ=255)
                                                             gcgcgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACagcagc                                       <  1:1961840/100‑1 (MQ=255)
                                                             gcgcgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACagcagc                                       <  1:283782/100‑1 (MQ=255)
                                                               gcgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTTGTCATACCGTTGAGCGCGATAGACAGCAGCTg                                     <  1:1767167/100‑1 (MQ=255)
                                                                cgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCt                                      <  1:2502097/98‑1 (MQ=255)
                                                                 gcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGAt                                   <  2:3300327/100‑1 (MQ=255)
                                                                    ggAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCt                                >  1:105243/1‑100 (MQ=255)
                                                                        gtgtGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAAt                            <  2:1935107/100‑1 (MQ=255)
                                                                           tgCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGt                          >  1:2488943/1‑99 (MQ=255)
                                                                           tgCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTa                         <  2:112302/100‑1 (MQ=255)
                                                                            gCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTAc                        >  2:583584/1‑100 (MQ=255)
                                                                             ccGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACg                       >  1:3481515/1‑100 (MQ=255)
                                                                               gTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACggg                     <  1:3803485/100‑1 (MQ=255)
                                                                                   gCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTAc                 >  1:417747/1‑100 (MQ=255)
                                                                                   gCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTAc                 >  1:1615775/1‑100 (MQ=255)
                                                                                    ccTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATATACAGCAGCTGATGCTTACTGTACGGGTTatg                <  1:2569856/100‑3 (MQ=255)
                                                                                    ccTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                >  2:1445858/1‑100 (MQ=255)
                                                                                    ccTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                <  1:3522015/100‑1 (MQ=255)
                                                                                    ccTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                <  1:1931568/100‑1 (MQ=255)
                                                                                     cccgcatcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACgg               >  1:352466/8‑100 (MQ=38)
                                                                                     cccgcatcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACgg               >  2:912757/8‑100 (MQ=38)
                                                                                       cgcatcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGAAGCTTAATGTACGGGTTACGGaa             >  2:689319/6‑100 (MQ=38)
                                                                                        gcatcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGaaa            >  1:2883526/5‑100 (MQ=255)
                                                                                        gcatcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGaaa            >  1:2886624/5‑100 (MQ=255)
                                                                                         catcctgccACAGCTGCTGGCAGGATGCGGGTGTGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc           >  2:2768215/4‑100 (MQ=255)
                                                                                         catcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc           >  2:3501323/4‑100 (MQ=255)
                                                                                         catcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc           >  2:3624900/4‑100 (MQ=255)
                                                                                         catcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc           >  1:3515161/4‑100 (MQ=255)
                                                                                         catcctgccACAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc           >  1:99522/4‑100 (MQ=255)
                                                                                          gccctgccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACg          >  2:3252065/1‑100 (MQ=255)
                                                                                           ccctgccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGc         <  1:702388/100‑1 (MQ=255)
                                                                                            cctgccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc        >  2:1724776/1‑100 (MQ=255)
                                                                                            cctgccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc        >  1:963488/1‑100 (MQ=255)
                                                                                               gccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg     <  1:2345538/100‑1 (MQ=255)
                                                                                               gccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg     >  1:2245669/1‑100 (MQ=255)
                                                                                                ccAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGt    >  1:878458/1‑100 (MQ=255)
                                                                                                 cagcagCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTg   <  1:1726139/100‑1 (MQ=255)
                                                                                                  agcagcTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGa  >  2:2362281/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTGTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGA  >  NC_000913/1609456‑1609653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: