| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2553762 | 107 (0.780) | 19 (0.150) | 12/164 | NT | 15.5% | coding (538/900 nt) | hemF | coproporphyrinogen III oxidase |
| ? | NC_000913 | = 2553775 | 108 (0.860) | coding (551/900 nt) | hemF | coproporphyrinogen III oxidase | |||||
CATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2553657‑2553762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacagcCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCAC < NC_000913/2553775‑2553677 CATCGCACCGCGCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTTCGACGAATACTTCTACCTCAAACATCGCAACG < 1:3623001/100‑1CATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACG < 2:1258876/100‑1CATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACG < 1:1010187/100‑1 ATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGGTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGA > 2:557026/1‑100 CGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAAC > 2:2357640/1‑100 CGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAAC > 1:527345/1‑100 TGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGC < 1:357314/100‑1 CTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGT < 1:1320534/100‑1 TGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTT < 1:1822083/100‑1 GCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTC < 1:726063/100‑1 CCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCG < 2:861333/100‑1 CCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCG < 1:3543426/100‑1 CCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCG < 1:2732900/100‑1 CCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCG < 1:2160533/100‑1 CATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGT < 1:2357655/100‑1 CATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGT < 1:561693/100‑1 TTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGTTG < 1:1037157/100‑1 TTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGTTG < 2:2075750/100‑1 TTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAAAGAACAGCCCGCCAATACCTCGCTGTTCGTTG < 1:2045881/100‑1 TGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCCACGAATACTTCTACCTCAATCATCGCAAAGAACAGCCCGCCAATACCGCGCTGTTCGTTG < 2:3488257/98‑1 GGCGAAGACGTTTATCCCCGTTACAGCAAGTGGTGCGTCGGATACTTCTACCTCACTCATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGTTGCGA < 2:1923217/100‑1 GAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGT < 1:2260458/100‑1 AAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAAAGAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTT < 1:1511039/100‑1 CGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAG < 1:1060462/100‑1 CGACGAATACTTCTACCCCCAACATCTCTACGTACAGCCCGCCAATACCGCGCTGTTCGTTGCTATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTT < 2:1978208/99‑1 GAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGCGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGC > 2:263077/1‑100 GAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGC < 1:2139735/100‑1 GAACAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGC > 2:2790536/1‑100 GAACAGCCCGCCAATACCGCGCTGTTCGTTGCAATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGC > 1:3621676/1‑100 CAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGG < 1:2460690/100‑1 CAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGG < 2:1786471/100‑1 CAGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGG < 1:2461610/100‑1 AGCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGC < 2:2411938/100‑1 GCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCA > 1:6694/1‑100 GCCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAACTCTTCGTCGCACCGCTATTTATACCGGGGATAAACCTCTTCGCCAAATGGC > 2:2677309/1‑95 GCCCGCCAATACCGCGCTGTTCGTTGAGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCA > 1:2317591/1‑100 GCCCGCCAATACAGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCA > 2:947821/1‑100 CCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCAC > 1:3758350/1‑100 CATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2553657‑2553762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacagcCCGCCAATACCGCGCTGTTCGTTGCGATGTTTGAGGTAGAAGTATTCGTCGCACCACTTTTTGTAACGGGGATAAACGTCTTCGCCAAATGGCAGGCAC < NC_000913/2553775‑2553677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |