New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620569 =	NA (NA)	41 (0.320)	11/166	NT	100%	coding (1378/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620582 =	0 (0.000)					coding (1391/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCcggcgt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3620667‑3620569 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  NC_000913/3620582‑3620686                                                                                                                                                                                                              CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCC                                                                                                          <  2:249138/100‑1  AATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCG                                                                                                         <  1:406892/100‑1  AATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCG                                                                                                         >  2:1248703/1‑100   ATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGG                                                                                                        <  1:3449687/100‑1   ATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGG                                                                                                        <  1:2913562/100‑1   ATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGG                                                                                                        <  1:1863883/100‑1     tccTCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCG                                                                                                      <  2:3472839/97‑1      CATCATATTCCCGGCGCCATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTCATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  1:1373167/1‑100      CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     <  1:790969/100‑1      CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  1:146309/1‑100      CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     <  1:1206899/100‑1      CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  1:1354077/1‑100                                                                 TGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTG                                          >  2:2693936/1‑100                                                                     GGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCATGACGGGCTGGAATTGCGCC                                      >  2:2837380/1‑100                                                                      GTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCG                                     >  1:734418/1‑100                                                                      GTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCG                                     >  1:2714776/1‑100                                                                         ATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGCGCCTGCCGGGCTGGAATTCCGCCGGG                                   >  2:184928/1‑99                                                                          TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAA                                 >  1:685129/1‑100                                                                          TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAA                                 >  1:2362177/1‑100                                                                            gaAAAACGCCGATCCCCTGCCATCCGGCGTTCTACTATAACCTCCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:2577967/3‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  1:2632993/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  1:949174/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  2:1054022/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  2:786273/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAAT                                >  2:1238767/1‑99                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAAca                               >  2:2235359/1‑98                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:2848333/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:3774944/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:1215010/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:1008430/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:1154918/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:3635745/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:1433131/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:323074/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:251335/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:337781/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:3509343/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:1277414/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:1008594/1‑100                                                                            GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAAT                                >  2:3121531/1‑99                                                                             TAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATAT                              >  2:134772/1‑100                                                                             TAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  2:3122230/1‑99                                                                             TAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATAT                              <  2:734411/100‑1                                                                              AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATAT                              >  1:753576/1‑99                                                                              AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCGGCCACCGGGCCTGACGGGCTGGAATGGCGCCGGGGATATt                             >  1:2078695/1‑99                                                                              AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATCTG                             >  2:3253714/1‑100                                                                              AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATG                             >  1:2771394/1‑100                                                                              AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGCCATATG                             >  2:2287016/1‑100                                                                               AAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATG                             >  2:883494/1‑99                                                                                AACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGAT                           >  1:1088323/1‑100                                                                                AACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGAT                           >  2:3318461/1‑100                                                                                 ACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATG                          >  1:3048608/1‑100                                                                                 ACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACAAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAACTGCGCCGGGTATATGA                            >  2:3723541/1‑98                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA       <  1:1549447/100‑1                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA       >  2:1213648/1‑100                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA       >  1:2712038/1‑100                                                                                                    CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTC        <  1:2884792/99‑1                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTTCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  2:2740433/100‑1                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      >  1:1961022/1‑100                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      >  1:684188/1‑100                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  2:3541481/100‑1                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      >  2:1278365/1‑100                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  1:3630941/100‑1                                                                                                     GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  1:3139804/100‑1                                                                                                      GCGTTTTACTATAACCACCACAACCGGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     <  2:3817950/100‑1                                                                                                      GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     <  1:3418646/100‑1                                                                                                      GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     >  2:2753352/1‑100                                                                                                      GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     <  2:1239004/100‑1                                                                                                       CGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGA    <  2:1434250/100‑1                                                                                                       CGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGA    <  2:2467477/100‑1                                                                                                        GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAA   <  1:3783228/100‑1                                                                                                        GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAA   >  1:1422618/1‑100                                                                                                        GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAA   >  2:1461620/1‑100                                                                                                        GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAA   <  1:1113049/100‑1                                                                                                        GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAA   >  1:384523/1‑100                                                                                                         TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  1:2013917/1‑100                                                                                                         TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  <  1:200097/100‑1                                                                                                         TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  2:433031/1‑100                                                                                                                                                                                                              CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCcggcgt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3620667‑3620569 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  NC_000913/3620582‑3620686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.