New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3620614	NA (NA)	31 (0.240)	9/166	NT	100%	coding (1423/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 3620635	0 (0.000)					coding (1444/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAAcgtcag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3620516‑3620614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACAT  <  NC_000913/3620635‑3620531                                                                                                                                                                                                               CAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAAC                                                                                                           >  2:2549552/1‑100  AGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACG                                                                                                          <  2:2650841/100‑1  AGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACG                                                                                                          <  1:862986/100‑1  AGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCAGCGTTTTACTATAACCACCACAACCAGTTAACG                                                                                                          >  2:677390/1‑100   GAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGT                                                                                                         <  1:469051/100‑1   GAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGT                                                                                                         >  1:444756/1‑100   GAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACG                                                                                                          >  2:2739257/1‑99   GAGGACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACG                                                                                                          <  1:205254/99‑1    AGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTC                                                                                                        <  1:306552/100‑1    AGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTC                                                                                                        <  1:163781/100‑1    AGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTC                                                                                                        <  1:1827424/100‑1    AGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCCTGTTACTATAACCACCACAACCAGCTAACGTC                                                                                                        >  2:3049843/1‑100     GTACAGCCCGGATGTGGTGACGTGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       >  2:1512176/1‑100     GTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       >  1:2862070/1‑100     GTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       <  2:2770077/100‑1     GTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       <  2:642001/100‑1     GTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       >  1:2213671/1‑100      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATACCCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  2:1270152/100‑1      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCTGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  2:2035713/100‑1      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  2:1069192/100‑1      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  1:300716/100‑1      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  1:3578810/100‑1      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCA                                                                                                       >  2:3569051/1‑99      TACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGCCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  1:2686296/100‑1       ACAGCCCGGATGTGGTGACGCGCCTCATCACTCGCATAACCACGCCGGATGGCATGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAG                                                                                                      <  2:3526067/99‑1       ACAGCCCGGATGCGGTGACGGGCCTCATCACGCGCACAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTC                                                                                                        <  2:2020038/97‑1          GCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCAGCGGCGTTTTACTATATCCACCACAACCCGTTAACGTCAGtc                                                                                                    >  2:1679875/1‑96                      TGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGT                                                                                     <  1:171177/100‑1                      TGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGT                                                                                     <  2:1759088/100‑1                      TGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGT                                                                                     <  1:3796144/100‑1                       GACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTT                                                                                    <  1:2306282/100‑1                       GACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTGCTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTT                                                                                    <  2:2118681/100‑1                       GACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACGATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTT                                                                                    <  2:521505/100‑1                        ACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  2:3676019/100‑1                        ACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  1:1206106/100‑1                        ACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  1:1347498/100‑1                        ACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  1:2252959/100‑1                        ACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  1:2252845/100‑1                        ACGGGCCTCATCACGCGCATAACAACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCCCCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTA                                                                                   <  1:1334408/100‑1                           GGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACT                                                                                <  1:2967972/100‑1                             CCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACTGG                                                                              <  1:3323892/100‑1                             CCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACTGG                                                                              <  2:991789/100‑1                             CCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACTGG                                                                              <  2:3799440/100‑1                              CTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACTGGc                                                                             <  1:2095603/100‑2                                           TAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTTTTACCTCCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATA                                                                <  1:3188786/100‑1                                                                                           ACCAGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAG                >  2:1683617/1‑100                                                                                           ACCAGTTAACGTCAGCC‑ACCGGGCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAG                >  1:1562076/1‑100                                                                                            CCAGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGG               >  1:212006/1‑100                                                                                            CCAGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGG               >  2:1463836/1‑100                                                                                            CCAGTTAACGTCAGCC‑ACCGGGCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGG               >  2:1639592/1‑100                                                                                             CAGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGC              >  1:1987986/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  2:2483450/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:1761364/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:323005/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:2297254/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:3630747/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:447904/1‑100                                                                                              AGTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCC             >  1:592925/1‑100                                                                                               GTTAACGTCAGCCACCGG‑GCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCC            >  1:2788310/1‑100                                                                                               GTTAACGTCAGCC‑ACCGGGCCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCC            >  1:150747/1‑100                                                                                                  AACGTCAGCC‑ACCGGGCCTGACGTTAACTGGTTGTGGGGGTTACAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTC         >  1:1108062/1‑100                                                                                                    CGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCAC       <  2:3773265/100‑1                                                                                                    CGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCAC       <  1:2522881/100‑1                                                                                                    CGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCAC       >  2:2563276/1‑100                                                                                                     GTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCTCTTCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACC      >  2:2682803/1‑100                                                                                                      TCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCA     <  2:1862059/100‑1                                                                                                      TCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCA     <  1:321580/100‑1                                                                                                      TCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCA     <  1:2498248/100‑1                                                                                                      TCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCA     <  2:1955468/100‑1                                                                                                       CAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGgatgtgg    >  1:3705544/1‑93                                                                                                       CAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCAC    <  1:1729201/100‑1                                                                                                       CAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCAC    <  1:2412280/100‑1                                                                                                        AGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACA   <  1:798661/100‑1                                                                                                        AGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACA   <  1:1258025/100‑1                                                                                                         GGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCGCGTCACCACAT  >  2:687085/1‑100                                                                                                         GGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACAT  >  1:1364564/1‑100                                                                                                         GGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACAT  >  2:1158984/1‑100                                                                                                         GGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTAAAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACAT  >  1:1763671/1‑100                                                                                                                                                                                                               CAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAAcgtcag‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3620516‑3620614 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTCAGGC‑CCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTGGTTATGCGCGTGATGAGGCCCGTCACCACAT  <  NC_000913/3620635‑3620531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.