New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 354733NA (NA)15 (0.120) 8/164 NT NA noncoding (135/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 354765 NA (NA)noncoding (167/171 nt) REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 161 total aligned reads displayed.

GCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATA  >  NC_000913/354634‑354832
                                                                                                   |                                                                                                   
gCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGAt                                                                                                     >  2:3012001/1‑100 (MQ=255)
 ccGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATg                                                                                                    <  1:3723887‑M1/100‑2 (MQ=255)
   gATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgc                                                                                                   <  2:1032869‑M1/99‑3 (MQ=255)
     tGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctg                                                                                                <  2:1062906‑M1/100‑6 (MQ=255)
     tGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctg                                                                                                <  2:3496215‑M1/100‑6 (MQ=255)
       ccTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgat                                                                                              >  1:3234541‑M1/1‑93 (MQ=255)
       ccTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgat                                                                                              >  1:780477‑M1/1‑93 (MQ=255)
       ccTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgat                                                                                              <  1:652621‑M1/100‑8 (MQ=255)
        cTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATg                                                                                             <  2:3352973/100‑1 (MQ=255)
           aTGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGa                                                                                          <  1:3682958/100‑1 (MQ=255)
            tGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGAc                                                                                         >  1:2691835/1‑100 (MQ=255)
                aCGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTg                                                                                     <  1:1826900/100‑1 (MQ=255)
                  gCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAc                                                                                   <  2:3598989/100‑1 (MQ=255)
                     gACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTGGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcgcg                                                                                >  1:576129/1‑100 (MQ=255)
                     gACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcgcg                                                                                <  1:121059/100‑1 (MQ=255)
                      aCGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGt                                                                               >  1:3235546/1‑100 (MQ=255)
                       cgcgTTTTATCATGCCTAAGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTc                                                                              >  1:3627550/1‑100 (MQ=255)
                        gcgTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTc                                                                              <  2:372915/99‑1 (MQ=255)
                          gTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTA                                                                           <  2:567585‑M2/100‑1 (MQ=255)
                          gTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTA                                                                           <  1:1625989‑M2/100‑1 (MQ=255)
                           ttttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcat                                                                          <  1:3639915‑M1/100‑28 (MQ=255)
                           ttttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTAT                                                                          >  2:3121593‑M2/1‑100 (MQ=255)
                            tttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATC                                                                         >  2:1210420‑M2/1‑100 (MQ=255)
                            tttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATC                                                                         >  1:2687891‑M2/1‑100 (MQ=255)
                            tttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATC                                                                         <  1:704317‑M2/100‑1 (MQ=255)
                             ttATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatca                                                                        <  1:970276‑M1/100‑30 (MQ=255)
                               aTCATGCCTACGGACCTGAACCGTAGGTCGGATGAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  2:713989‑M2/1‑100 (MQ=255)
                               aTCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcagg                                                                      <  2:636722‑M1/100‑32 (MQ=255)
                               aTCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      <  1:270972‑M2/100‑1 (MQ=255)
                                tCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     >  2:3407288‑M2/1‑100 (MQ=255)
                                tCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     >  1:500796‑M2/1‑100 (MQ=255)
                                 cATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggca                                                                    <  1:37479‑M1/100‑34 (MQ=255)
                                 cATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGcc                                                                    <  2:284170/100‑1 (MQ=255)
                                 cATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGcc                                                                    >  2:968453/1‑100 (MQ=255)
                                 cATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     >  2:2716473‑M2/1‑99 (MQ=255)
                                   tGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatc                                                                  <  1:719291‑M1/100‑36 (MQ=255)
                                   tGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatc                                                                  <  2:2242771‑M1/100‑36 (MQ=255)
                                   tGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatc                                                                  <  1:1165014‑M1/100‑36 (MQ=255)
                                   tGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatc                                                                  <  2:3811048‑M1/100‑36 (MQ=255)
                                    gCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAc                                                                 <  2:2782395/100‑1 (MQ=255)
                                     ccTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatctg                                                                <  1:3024242‑M1/100‑38 (MQ=255)
                                      cTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATgcctgataagacgcgtcagcgtcgcatcaggcatctga                                                               <  2:2209660‑M1/100‑39 (MQ=255)
                                        aCGGACCTGAACAGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCAc                                                             <  2:1937607/100‑1 (MQ=255)
                                           gACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGt                                                          >  1:1418772/1‑100 (MQ=255)
                                           gACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTAAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGt                                                          >  2:729149/1‑100 (MQ=255)
                                             ccTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGttt                                                        <  1:399140/100‑1 (MQ=255)
                                             ccTGAACAGTAGGTCGGATAAGGCGCTGGCGTCGCATCCGACAGCATGCGCAGATGGCTGATGTGACGGTGTCGCGTGTTATCAGGCCTatgcaaagttt                                                        >  2:1638652/1‑90 (MQ=21)
                                              cTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGtttt                                                       >  2:1321864/1‑100 (MQ=255)
                                                 aaCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTac                                                    >  2:3600358/1‑100 (MQ=255)
                                                 aaCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTac                                                    <  2:2891079/100‑1 (MQ=255)
                                                  aCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTaca                                                   >  1:3543214/1‑100 (MQ=255)
                                                  aCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTaca                                                   <  1:903567/100‑1 (MQ=255)
                                                  aCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCACGCCTACCCACTGTTTTTaca                                                   <  2:2326940/100‑1 (MQ=255)
                                                   ccGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac                                                  >  1:1469855/1‑100 (MQ=255)
                                                    cGTAGGTCGTATAAGGCGCTCGCGTCGCATCCGACCCCATGCTCAGATGCCTGATTCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTac                                                    <  2:1831499/97‑1 (MQ=255)
                                                        ggTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATa                                             >  2:2846914/1‑100 (MQ=255)
                                                        ggTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATa                                             >  2:3766796/1‑100 (MQ=255)
                                                         gTCGGATAAGGCGCTCGCGTCGCATCCTGGACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCTTACCCACTGTTTTTACACCg                                                <  2:110673/96‑1 (MQ=25)
                                                         gTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATaa                                            <  2:3713309/100‑1 (MQ=255)
                                                                aaGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTTACGCGTCTTATCAGGCCTACCCACTGTTTTTACCCCGCTAAttttt                                       >  2:2599686/1‑98 (MQ=255)
                                                                 aGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTccc                                    >  2:1825287/1‑100 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   >  2:1745682/1‑100 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   >  2:1354723/1‑100 (MQ=255)
                                                                  ggCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTcccc                                   <  1:984143/100‑1 (MQ=255)
                                                                  ggCGCGCGCGTCGCATCCGACACCATGCTCAGATTCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTATTTACACCGATAATTTTTccc                                    <  2:201226/99‑1 (MQ=255)
                                                                   gcgcTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTccccc                                  <  1:421550/100‑1 (MQ=255)
                                                                      cTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCAcc                               <  2:1666349/100‑1 (MQ=255)
                                                                      cTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCAcc                               >  2:637703/1‑100 (MQ=255)
                                                                      cTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCAcc                               <  2:56868/100‑1 (MQ=255)
                                                                        cgcgTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCtt                             >  1:2820608/1‑100 (MQ=255)
                                                                           gTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCttttt                          >  2:1867154/1‑100 (MQ=255)
                                                                            tCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTg                         <  1:1114944/100‑1 (MQ=255)
                                                                            tCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTg                         <  2:2948140/100‑1 (MQ=255)
                                                                             cGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTg                         <  2:1201256/99‑1 (MQ=255)
                                                                              gCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCa                       >  2:3481229/1‑100 (MQ=255)
                                                                                atcaaacacCATGCTCAGATGCCTGATGAGACGCTGACGCGCCTTCTCAGGCCTACCCACTGTTCTTAAACAGATAATTTTTACCCTACCTTTTTGCACt                     >  2:3803140/6‑100 (MQ=255)
                                                                                 tCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCAcac                    >  1:3438975/1‑98 (MQ=255)
                                                                                   cGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcat                  <  2:614362/100‑1 (MQ=255)
                                                                                   cGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcat                  >  1:2228670/1‑100 (MQ=255)
                                                                                    gACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcatt                 <  1:1015099/100‑1 (MQ=255)
                                                                                      cacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattca               <  1:3777874/100‑1 (MQ=255)
                                                                                       acCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattcat              <  1:296049/100‑1 (MQ=255)
                                                                                        ccATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACtcattcat              >  1:3274109/1‑99 (MQ=255)
                                                                                             cTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATaaaa        >  2:2626122/1‑100 (MQ=255)
                                                                                             cTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATaaaa        >  1:3463680/1‑100 (MQ=255)
                                                                                              tCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtag       <  1:323694‑M2/100‑63 (MQ=255)
                                                                                              tCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATaaaaa       >  1:2432397/1‑100 (MQ=255)
                                                                                               cAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtagg      <  1:2185017‑M2/100‑64 (MQ=255)
                                                                                               cAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTTTTCTCATTCATATaaaaaa      >  2:2597013/1‑100 (MQ=255)
                                                                                               cAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAGTTTTCACCCACCTTATTGCACTCATTCATATaaaaaa      >  2:2575400/1‑100 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggc     <  2:2254762‑M2/100‑65 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     <  2:443731/100‑1 (MQ=255)
                                                                                                aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAat     >  1:3077106/1‑100 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggca    <  1:1421604‑M2/100‑66 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggca    <  2:2242771‑M2/100‑66 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCatctgagcatggtgtcggatgcgacgcgagcgccttatccgacctacggttcaggtccgtaggca    <  1:1165014‑M2/100‑66 (MQ=255)
                                                                                                 gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAata    <  1:2695164/100‑1 (MQ=255)
                                                                                                  aTGCCTGATGCTACGCTGACGCGTCTTATCATGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAACAAata    <  1:1269803/99‑1 (MQ=255)
                                                                                                  aTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAata    <  1:846164/99‑1 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAatata  <  1:211005/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATA  >  NC_000913/354634‑354832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.