New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1269645 =91 (0.670)30 (0.240) 10/160 NT 26.9% intergenic (‑370/+58) ldrA/ldrB toxic polypeptide, small/toxic polypeptide, small
?NC_000913 1270172 = NA (NA)intergenic (‑362/+66) ldrB/ldrC toxic polypeptide, small/toxic polypeptide, small

Only 100 of 165 total aligned reads displayed.

ACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAAT  >  NC_000913/1269546‑1269744
                                                                                                   |                                                                                                   
gcgattgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagc                                                                                                     <  1:314667‑M1/1‑1 (MQ=255)
 cgattgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagcc                                                                                                    <  2:1029876‑M1/2‑1 (MQ=255)
   gTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTg                                                                                                  >  2:460700/1‑100 (MQ=40)
   gTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTg                                                                                                  >  2:3615712/1‑100 (MQ=40)
   gTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGATGCCAATATTTACTTGTGGAAGCGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCt                                                                                                   >  2:2106947/1‑99 (MQ=255)
   gTCATTTCATGAGGGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCCATATTTACTTGTGGAAGTGATAAAGACAACAATGGCCGCAGGCTGTTACCCCt                                                                                                   >  2:1847662/1‑99 (MQ=14)
    ttgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGc                                                                                                 <  1:3665311‑M1/5‑1 (MQ=255)
    ttgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGc                                                                                                 >  1:935393‑M1/96‑100 (MQ=255)
    ttgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGc                                                                                                 >  2:3190459‑M1/96‑100 (MQ=255)
    ttgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccacaggggtaacagCCTGc                                                                                                 >  2:1568715‑M1/96‑100 (MQ=255)
     tgtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCg                                                                                                >  1:2385224‑M1/95‑100 (MQ=255)
      gtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCgg                                                                                               <  2:3383719‑M1/7‑1 (MQ=255)
      gtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCgg                                                                                               >  1:2216632‑M1/94‑100 (MQ=255)
      gtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCgg                                                                                               <  2:3150627‑M1/7‑1 (MQ=255)
      gtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCgg                                                                                               <  2:3086558‑M1/7‑1 (MQ=255)
      gtcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCg                                                                                                <  2:2444470‑M1/6‑1 (MQ=255)
      aTTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCgg                                                                                               <  1:3197247/100‑1 (MQ=40)
       tcagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCGGc                                                                                              <  2:2301153‑M1/8‑1 (MQ=255)
        ttCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGcc                                                                                             <  1:1711473/100‑1 (MQ=38)
        cagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCGGcc                                                                                             <  1:1711205‑M1/9‑1 (MQ=255)
        cagctggtggcgtaaccggaagtaaggtgaaaacgggcgtcaggctgccgtgatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCGGcc                                                                                             <  1:531646‑M1/9‑1 (MQ=255)
         tCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCg                                                                                            >  2:832658/1‑100 (MQ=35)
          cATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCgg                                                                                           <  2:2740626/100‑1 (MQ=38)
          cATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCgg                                                                                           >  2:1381827/1‑100 (MQ=38)
          cATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCgg                                                                                           >  2:498343/1‑100 (MQ=38)
           aTGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGt                                                                                          >  2:517583/1‑100 (MQ=35)
            tGAGTGCTCTGGATGAGGCTTCCAGCGCGGGTTGCCAATATTTACTTGTGGATGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCgn                                                                                           <  1:1570231/98‑2 (MQ=255)
               gTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCg                                                                                      >  1:1537479/1‑100 (MQ=38)
                 gCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg                                                                                    >  1:2322953/1‑100 (MQ=38)
                 gCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCggg                                                                                    >  2:2113697/1‑100 (MQ=38)
                 gCTCTGGATGAGGCTTCCAGCTCGGGTTGCAAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCgg                                                                                     >  2:3646080/1‑99 (MQ=38)
                  ctctGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgc                                                                                   <  1:341475/100‑1 (MQ=38)
                   tctGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgcg                                                                                  <  1:1728145/100‑1 (MQ=38)
                   tctGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGgcg                                                                                  <  1:3026397/100‑1 (MQ=38)
                      ggATGAGGCATCCAGCTCGGGTTGCCAATATTTACTTTTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCat                                                                               >  2:896375/1‑100 (MQ=255)
                       gATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCata                                                                              >  2:2140741/1‑100 (MQ=38)
                          gAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTg                                                                           >  2:1283891/1‑100 (MQ=35)
                           aGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGc                                                                          >  1:1623909/1‑100 (MQ=35)
                            ggCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc                                                                         >  1:1378977/1‑100 (MQ=35)
                            ggCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc                                                                         >  1:1469238/1‑100 (MQ=35)
                            ggCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc                                                                         >  2:3246259/1‑100 (MQ=33)
                            ggCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc                                                                         >  1:2120814/1‑100 (MQ=35)
                            ggCTTCCAGCTCGGGTTGCCAATATTTACGTGTAGAAGTGATAAAGACGAAAAGGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGcc                                                                         <  2:472195/100‑1 (MQ=11)
                                   aGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACgg                                                                  <  1:3319522/100‑1 (MQ=32)
                                    gCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGc                                                                 <  2:822069/100‑1 (MQ=33)
                                            tGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc                                                         <  1:2111635/100‑1 (MQ=33)
                                            tGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGAc                                                         >  2:3278716/1‑100 (MQ=33)
                                              ccAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc                                                       >  1:2690633/1‑100 (MQ=32)
                                              ccAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc                                                       >  1:3258959/1‑100 (MQ=33)
                                              ccAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGc                                                       <  1:2290382/100‑1 (MQ=33)
                                                   atTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGtt                                                  >  2:2560459/1‑100 (MQ=33)
                                                    tttACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGttt                                                 >  1:177907/1‑100 (MQ=32)
                                                       aCTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCa                                              <  2:3192266/100‑1 (MQ=32)
                                                        cTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTTGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCa                                              >  2:2688141/1‑99 (MQ=17)
                                                         taatgGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGTCTGACGCCCGTTTTCAcc                                            <  1:1009688/97‑1 (MQ=255)
                                                           gatggcaatatgcgcccgaaaccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCtt                                          <  1:2740100‑M1/60‑1 (MQ=255)
                                                             ggAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTAc                                        >  1:2885242/1‑100 (MQ=33)
                                                                  tGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCg                                   <  2:1364161/100‑1 (MQ=11)
                                                                  tGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCg                                   <  1:2095061/100‑1 (MQ=11)
                                                                         cccgaaaccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGc                            <  1:869304‑M1/74‑1 (MQ=255)
                                                                               accggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCCTATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAg                      <  2:2423320‑M1/80‑1 (MQ=255)
                                                                               accggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAg                      <  1:1216461‑M1/80‑1 (MQ=255)
                                                                                ccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                     <  1:2745953‑M1/81‑1 (MQ=255)
                                                                                ccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                     <  1:3551804‑M1/81‑1 (MQ=255)
                                                                                ccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                     <  1:957128‑M1/81‑1 (MQ=255)
                                                                                ccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                     <  2:1105095‑M1/81‑1 (MQ=255)
                                                                                ccggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGc                     <  1:289856‑M1/81‑1 (MQ=255)
                                                                                 cggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAgct                    <  2:1097220‑M1/82‑2 (MQ=255)
                                                                                 cggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAgct                    <  2:2954036‑M1/82‑2 (MQ=255)
                                                                                 cggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGcc                    <  1:1789709‑M1/82‑1 (MQ=255)
                                                                                 cggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGcc                    <  1:2546716‑M1/82‑1 (MQ=255)
                                                                                  ggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCagctg                   <  2:1391784‑M1/83‑3 (MQ=255)
                                                                                  ggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCagctg                   <  1:741029‑M1/83‑3 (MQ=255)
                                                                                  ggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCagctg                   <  1:382399‑M1/83‑3 (MQ=255)
                                                                                  ggccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCg                   <  2:3343155‑M1/83‑1 (MQ=255)
                                                                                   gccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACcagctga                  <  2:486213‑M1/84‑4 (MQ=255)
                                                                                   gccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCagctg                   <  2:2208552‑M1/83‑3 (MQ=255)
                                                                                   gccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAgct                    <  1:281497‑M1/82‑2 (MQ=255)
                                                                                   gccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGGTTTCACCTTACTTCCGGTTACGCCACcagctga                  <  2:2790262‑M1/84‑4 (MQ=255)
                                                                                   gCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa                  >  1:3499919/1‑100 (MQ=32)
                                                                                   gCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa                  >  2:725821/1‑100 (MQ=32)
                                                                                   gCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa                  >  1:1312098/1‑100 (MQ=32)
                                                                                   gCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGa                  >  1:3072468/1‑100 (MQ=32)
                                                                                    ccgcaggggtaacagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGAc                 <  1:3331211‑M1/85‑1 (MQ=255)
                                                                                    ccGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCggc                 <  1:2579322/100‑3 (MQ=14)
                                                                                     cGCAGGCTGTTACCCCTGCGGCCGGTTTCGTGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGAc                 <  1:1249942/99‑1 (MQ=17)
                                                                                     cGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACa                >  2:1455702/1‑100 (MQ=32)
                                                                                     cGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACa                >  1:1348122/1‑100 (MQ=33)
                                                                                          gttGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCGATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCg            <  2:2323363/97‑1 (MQ=17)
                                                                                          gCTGTCACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGc           <  1:1979987/100‑1 (MQ=18)
                                                                                            tGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTg         <  2:1268028/100‑1 (MQ=32)
                                                                                              ttACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCg       <  2:1208779/100‑1 (MQ=33)
                                                                                              ttACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCg       <  2:568809/100‑1 (MQ=33)
                                                                                              ttACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCg       <  2:285154/100‑1 (MQ=33)
                                                                                               tACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCgg      >  2:1800393/1‑100 (MQ=33)
                                                                                               tACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCgg      >  1:1050030/1‑100 (MQ=33)
                                                                                                cagCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGt     >  2:289855‑M1/4‑100 (MQ=255)
                                                                                                aCCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGt     <  1:2181153/100‑1 (MQ=33)
                                                                                                   CCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGtaat  <  2:182976‑M1/100‑1 (MQ=255)
                                                                                                   CCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGtaat  <  2:2013252‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACAGTCATTTCATGAGTGCTCTGGATGAGGCTTCCAGCTCGGGTTGCCAATATTTACTTGTGGAAGTGATAAAGACAAAAATGGCCGCAGGCTGTTACCCCTGCGGCCGGTTTCGGGCGCATATTGCCATCACGGCAGCCTGACGCCCGTTTTCACCTTACTTCCGGTTACGCCACCAGCCGACAATCGCTGCGGTAAT  >  NC_000913/1269546‑1269744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.