New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3781697NA (NA)12 (0.100) 6/164 NT NA intergenic (+9/+44) trmL/cysE tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase
?NC_000913 = 3781726 NA (NA)noncoding (29/29 nt) REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 219 total aligned reads displayed.

CCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781598‑3781796
                                                                                                   |                                                                                                   
 cGCAACATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGg                                                                                                    <  1:533529‑M1/100‑2 (MQ=255)
  gcagcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCGGGGAGCGGTATTGAGAGATTAGTTACTGTAGgc                                                                                                   >  2:2739953‑M1/1‑98 (MQ=255)
  gcagcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGg                                                                                                    >  2:2870332‑M1/1‑98 (MQ=255)
   cagcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgcc                                                                                                  <  1:738279‑M1/100‑4 (MQ=255)
    agcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccg                                                                                                 <  2:916968‑M1/100‑5 (MQ=255)
    agcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccg                                                                                                 <  1:326829‑M1/100‑5 (MQ=255)
     ggatgAATCTGTCCAATGCGGTGTCGGTAGGGGTGTATGAAGCCTGGCGGCAGTTGGGGGATCCGGGAGTGGTATTGAGAGATTAGTTACTGTAGgccgg                                                                                                <  2:130046‑M1/98‑6 (MQ=255)
     gcaTGAATCTGTCCCATGCGGTGTCGGTAGTGGCGAATGAAGCCTCGCGGAAGTTGGGGAAACCGGGAGCGCAAGCGAGAAAATCGCTACTGTAGGCCgg                                                                                                >  1:2360191/1‑100 (MQ=255)
     gcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccgg                                                                                                <  2:661656‑M1/100‑6 (MQ=255)
        tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggat                                                                                              >  2:3755734‑M1/1‑92 (MQ=255)
          aaTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAga                                                                                           <  1:1728187/100‑1 (MQ=255)
          aaTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAga                                                                                           <  2:665696/100‑1 (MQ=255)
           aTCTGTCCAATGGGGTGTCGGTAGTGGGGTATGAAGCCTGGCGGCAGTTTGGGTATCCGGGAGCGGTATTGAGCGATTAGTTACTGTAGGCCGGATAga                                                                                           <  2:52917/99‑1 (MQ=255)
           aTCTGTCCAATGCGCTGTCGGTAGTGGTGTATGAACCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTAGAGAGCGATTAGGTACTGTAGGCCGGATAg                                                                                            >  2:1321404/1‑98 (MQ=255)
            tCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatg                                                                                         <  1:2397283/100‑1 (MQ=255)
              tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                       <  1:3668313/100‑1 (MQ=255)
                tCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTa                                                                                     <  2:393249/100‑1 (MQ=255)
                tCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTa                                                                                     <  1:2990712/100‑1 (MQ=255)
                 ccAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTAc                                                                                    >  1:2082189/1‑100 (MQ=255)
                   aaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGGGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACAt                                                                                  >  2:1713966/1‑100 (MQ=255)
                   aaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgagatcgg                                                                                  >  1:2454558/1‑94 (MQ=255)
                   aaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACAt                                                                                  >  1:2827496/1‑100 (MQ=255)
                    aTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATc                                                                                 <  2:1226798/100‑1 (MQ=255)
                    aTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATc                                                                                 >  1:384531/1‑100 (MQ=255)
                    aTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATc                                                                                 >  2:1263954/1‑100 (MQ=255)
                     tGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCg                                                                                <  2:193936/100‑1 (MQ=255)
                     tGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCg                                                                                <  1:1594757/100‑1 (MQ=255)
                       cGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCA                                                                              >  2:1049321‑M2/1‑100 (MQ=255)
                        ggTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCAT                                                                             <  1:22886‑M2/100‑1 (MQ=255)
                         gtgtCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATC                                                                            >  1:3741699‑M2/1‑100 (MQ=255)
                            tCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccgg                                                                         <  2:749899‑M1/100‑29 (MQ=255)
                             cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggc                                                                        <  2:1450607‑M1/100‑30 (MQ=255)
                             cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGC                                                                        <  1:869354‑M2/100‑1 (MQ=255)
                              ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                       >  2:3527600/1‑100 (MQ=255)
                              ggTAGTGGTGGATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGCGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                       <  2:2501082/100‑1 (MQ=255)
                               ccgatcttgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAc                                                                      <  2:161210/93‑1 (MQ=255)
                                tAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACg                                                                     <  1:2847904/100‑1 (MQ=255)
                                 aGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGa                                                                    <  2:3596510/100‑1 (MQ=255)
                                  gtggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGa                                                                    <  2:145561/99‑1 (MQ=255)
                                   tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                  <  2:1475612/100‑1 (MQ=255)
                                    ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggcctacagt                                                                 <  1:776968‑M1/100‑37 (MQ=255)
                                    ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                 <  2:3320647/100‑1 (MQ=255)
                                      tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAcagatcgg                                                               >  1:161210/1‑93 (MQ=255)
                                      tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               <  2:101384/100‑1 (MQ=255)
                                       gtATGAAGCCGGGCGGCACTTGGGGTAGCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCTCAATAGATGATTACATCGCATCCGGCACGATCACAg                                                              <  1:116748/100‑1 (MQ=255)
                                         aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                            >  2:3157609/1‑100 (MQ=255)
                                          tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGan                                                           <  1:3081097/100‑2 (MQ=255)
                                          tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                           >  1:118312/1‑100 (MQ=255)
                                              gCCTGGCGGCAGTTGGGGTCTCCGGGACAGGTATTGGGTGTTGATGTTCTGTAGGCCGTATATATGATTACATCGCATCCGGCACGATCACATGAGATTa                                                       <  2:82963/100‑1 (MQ=255)
                                               ccTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAg                                                      <  1:1311556/100‑1 (MQ=255)
                                                 tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                    <  1:883219/100‑1 (MQ=255)
                                                  ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                   <  2:234415/100‑1 (MQ=255)
                                                  ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                   <  2:3253309/100‑1 (MQ=255)
                                                    cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                 >  1:1859503/1‑100 (MQ=255)
                                                    cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                 >  1:2554496/1‑100 (MQ=255)
                                                      gcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccat                                               >  2:1256952/1‑100 (MQ=255)
                                                        aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                             >  2:3417089/1‑100 (MQ=255)
                                                           tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                          <  2:2415779/100‑1 (MQ=255)
                                                            ggggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCAt                                         >  1:192431/1‑100 (MQ=255)
                                                            ggggTATCCGGGAGCAGTATTGAGAGATTAGTTACTGCAGGCCGGATAGATAATTACATCGCATCCGGCAAGATCACAGGACATTAGAccccatccccat                                         <  2:1707592/100‑1 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        >  2:2388779/1‑100 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        <  1:668756/100‑1 (MQ=255)
                                                              ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       <  1:744027/100‑1 (MQ=255)
                                                               gTAGCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       <  2:1850519/99‑1 (MQ=255)
                                                                 aTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCa                                    >  2:2045784/1‑100 (MQ=255)
                                                                     gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                <  2:2952703/100‑1 (MQ=255)
                                                                     gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAAGACATTAGATCCCATCCCCATACTCAAATg                                >  2:773215/1‑100 (MQ=255)
                                                                         gCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                            >  1:2726965/1‑100 (MQ=255)
                                                                         gCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                            >  1:3626803/1‑100 (MQ=255)
                                                                          cGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATg                            >  2:191005/1‑99 (MQ=255)
                                                                           ggTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGt                          >  1:3157473/1‑100 (MQ=255)
                                                                           ggTATTGAGAGATTAGGTACTGTAGGCCGGGTAGATGATTACATCGCAGCCGGGACGATCACAGGACATGAGATCCCGGGGGCATACGCAAatggatgg                           >  1:3044754/1‑99 (MQ=255)
                                                                            gTATTGAGAGATTAGTTACTGTAGGCCGGATAGCTGATTACATCGCATCAGGCCAGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATAGt                          >  2:1701365/1‑99 (MQ=255)
                                                                            gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         <  2:3803127/100‑1 (MQ=255)
                                                                             tATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATTTATGGTTa                        >  2:175179/1‑100 (MQ=255)
                                                                               ttGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                      <  1:405140/100‑1 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:3461616/1‑100 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:2673308/1‑100 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:563167/1‑100 (MQ=255)
                                                                                  agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                   >  1:3784003/1‑100 (MQ=255)
                                                                                  agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                   >  1:2604778/1‑100 (MQ=255)
                                                                                   gagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                  >  2:2182742/1‑100 (MQ=255)
                                                                                      aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:3578538/100‑1 (MQ=255)
                                                                                          gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt           <  2:178145/100‑1 (MQ=255)
                                                                                          gTTACTGTAAGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt           >  1:1435241/1‑100 (MQ=255)
                                                                                              cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCGAATGTATGGTTAATACCGTTGAAATGCTg       <  2:865923/100‑1 (MQ=255)
                                                                                              cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg       >  1:424522/1‑100 (MQ=255)
                                                                                               tGTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccac      <  1:597525‑M2/100‑67 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccact     <  1:1530758‑M2/100‑68 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccact     <  1:3648127‑M2/100‑68 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccact     <  1:1351826‑M2/100‑68 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccact     <  1:967840‑M2/100‑68 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt     >  1:110314/1‑100 (MQ=255)
                                                                                                 tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc    <  1:290287/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc   <  1:2639853/100‑1 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatccaccactacc  <  2:603269‑M2/100‑71 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccactacc  <  1:1410171‑M2/100‑71 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccactacc  <  1:2464588‑M2/100‑71 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa  >  1:989413/1‑100 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa  <  1:2191897/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781598‑3781796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.