New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4457189 =NA (NA)11 (0.090) 7/164 NT NA noncoding (5/84 nt) REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4457219 = NA (NA)noncoding (35/84 nt) REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 251 total aligned reads displayed.

GGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAA  >  NC_000913/4457090‑4457288
                                                                                                   |                                                                                                   
ggcggTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAgg                                                                                                     >  2:3662562/1‑100 (MQ=255)
  cggTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGcc                                                                                                   <  1:2991764/100‑1 (MQ=255)
  cggTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGcc                                                                                                   >  1:1411783/1‑100 (MQ=255)
   attttcgttgttgatgtgagtatggtttgccggatacggtgcacctgtaggcctgataagacgcatcaagcgtcgcatcaggcactatgctcaaatGCCg                                                                                                  <  2:1039985‑M1/4‑1 (MQ=255)
    gTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCgg                                                                                                 <  2:40571/100‑1 (MQ=255)
         ggtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAg                                                                                            >  1:2515268/1‑100 (MQ=255)
         ggtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAg                                                                                            <  1:616521/100‑1 (MQ=255)
         ggtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAg                                                                                            <  1:1519634/100‑1 (MQ=255)
         ggtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAg                                                                                            >  1:1781709/1‑100 (MQ=255)
          gtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAgg                                                                                           >  1:2934339/1‑100 (MQ=255)
          gtggGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAgg                                                                                           >  1:3183631/1‑100 (MQ=255)
          gtggGATCCACCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCATACCCAGATATAGTATGCGTAGGCCGGATAAgg                                                                                           <  2:2513440/100‑1 (MQ=255)
            gggATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCg                                                                                         <  1:3444686/100‑1 (MQ=255)
             ggATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGt                                                                                        <  2:1175687/100‑1 (MQ=255)
               aTCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGtt                                                                                       <  2:3726107/99‑1 (MQ=255)
                tCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCa                                                                                     <  1:957043/100‑1 (MQ=255)
                tCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCa                                                                                     >  1:1465767/1‑100 (MQ=255)
                   aTCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgc                                                                                  >  1:887951/1‑100 (MQ=255)
                   aTCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgc                                                                                  <  1:2726940/100‑1 (MQ=255)
                    tCAGAAACTGGTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgcc                                                                                 <  2:2423636/100‑1 (MQ=255)
                    tCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgc                                                                                  >  2:2284464/1‑99 (MQ=255)
                      aGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                               >  1:3812017/1‑100 (MQ=255)
                      aGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgccgc                                                                               >  1:3579475/1‑100 (MQ=255)
                      aGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCAcgccg                                                                                <  1:519616/99‑1 (MQ=255)
                       gAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCa                                                                              >  2:3569349/1‑100 (MQ=255)
                           ctgctgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                                          <  1:644413/100‑1 (MQ=255)
                            tttgccggatacggtgcacctgtaggcctgataagacgcatcaagcgtcgcatcaggcactatgctcaaatGCCGGATAAGGCGTTCACGCCGCATCCgg                                                                         >  1:1325871‑M1/72‑100 (MQ=255)
                             gctgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                                        >  1:1832221/1‑100 (MQ=255)
                              ctgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                                                                       >  2:778526/1‑100 (MQ=255)
                               tgGATGGTCTGGCGAAGAAGGCGGAAGCTGCGCAGTAATTCGGCCTCAGCCTGAGATAGCAT‑‑‑T‑‑GCCGGATAAGGCGTTTACGCCGCATCCGGCATTTGAg                                                                 <  2:3382881/100‑1 (MQ=12)
                               tgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                                                                      <  1:2007291/100‑1 (MQ=255)
                               tgGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAACTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                                                                      <  2:2072376/100‑1 (MQ=255)
                                ggATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGccta                                                                     <  2:919539/100‑4 (MQ=25)
                                ggATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAtt                                                                     >  1:3036448/1‑100 (MQ=255)
                                ggATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAtt                                                                     >  1:1386704/1‑100 (MQ=255)
                                ggATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAtt                                                                     >  2:2646176/1‑100 (MQ=255)
                                ccggatacggtgcacctgtaggcctgataagacgcatcaagcgtcgcatcaggcactatgctcaaatGCCGGATAAGGCGTTCACGCCGCATCCGGCAtt                                                                     >  1:3271094‑M1/68‑100 (MQ=255)
                                  aTGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTg                                                                   <  1:2390087/100‑1 (MQ=255)
                                   tGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCTGATACGGCGTTCACGCCGCATCCGGCATTTg                                                                   >  2:1530894/1‑99 (MQ=255)
                                      gCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATACGGCGTTCACGCCGCATCCGGCATTTGAGCa                                                               >  1:1086592/1‑100 (MQ=255)
                                        ggtgcacctgtaggcctgataagacgcatcaagcgtcgcatcaggcactatgctcaaatGCCGGATAAGGCGTTCACGCCGCATCCGGCatttgaagatc                                                             <  1:2429559‑M1/41‑6 (MQ=255)
                                         ggCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAg                                                            >  1:1952119/1‑100 (MQ=255)
                                          gCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGt                                                           >  1:3210455/1‑100 (MQ=255)
                                          gCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGt                                                           <  1:66981/100‑1 (MQ=255)
                                           cGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTg                                                          <  1:1170490/100‑1 (MQ=255)
                                           cGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTACGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCACAg                                                            >  2:2029614/1‑98 (MQ=255)
                                             aagaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGcc                                                        <  1:3540975/100‑1 (MQ=255)
                                             aagaagGCGGAAGCCGCGCAGTAAGTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGcc                                                        <  2:3269053/100‑1 (MQ=255)
                                             aagaagGCGCAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGcc                                                        <  2:294956/100‑1 (MQ=255)
                                              agaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCt                                                       >  1:3090219/1‑100 (MQ=255)
                                               gaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTg                                                      <  1:1673743/100‑1 (MQ=255)
                                                   gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                  <  2:1613519/100‑1 (MQ=255)
                                                   gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                  <  1:216714/100‑1 (MQ=255)
                                                   gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                  <  1:2360450/100‑1 (MQ=255)
                                                   gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGACATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATCGTGTCTGATGc                                                  <  2:2004797/100‑1 (MQ=255)
                                                      gAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGAc                                               <  2:3777689/100‑1 (MQ=255)
                                                         gCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCt                                            >  2:1832025/1‑100 (MQ=255)
                                                          ccGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                           >  1:2278344/1‑100 (MQ=255)
                                                          ccGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                           >  2:351915/1‑100 (MQ=255)
                                                            gcgcAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGa                                         >  2:3201297/1‑100 (MQ=255)
                                                             cgcAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAt                                        >  2:956412/1‑100 (MQ=255)
                                                             cgcAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAt                                        <  1:3690458/100‑1 (MQ=255)
                                                               cAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCGTCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGc                                      >  1:437895/1‑100 (MQ=255)
                                                                aGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCg                                     <  2:56167/100‑1 (MQ=255)
                                                                aGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCg                                     <  1:3308844/100‑1 (MQ=255)
                                                                aGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCg                                     <  1:3719976/100‑1 (MQ=255)
                                                                aGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCg                                     <  1:781256/100‑1 (MQ=255)
                                                                  tAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTc                                   <  2:1302071/100‑1 (MQ=255)
                                                                      tCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTAt                               <  1:3635505/100‑1 (MQ=255)
                                                                        ggCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCa                             >  2:1348210/1‑100 (MQ=255)
                                                                        ggCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCa                             <  2:2694335/100‑1 (MQ=255)
                                                                         gCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAg                            <  2:2196218/100‑1 (MQ=255)
                                                                          ccTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAgg                           >  2:212337/1‑100 (MQ=255)
                                                                           cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAgg                           <  2:3602537/99‑1 (MQ=255)
                                                                           cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGc                          <  2:331677/100‑1 (MQ=255)
                                                                            ttggCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                         <  2:1081312/97‑1 (MQ=255)
                                                                            ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                         <  1:459780/100‑1 (MQ=255)
                                                                            ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                         <  2:611244/100‑1 (MQ=255)
                                                                             tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCt                        <  1:215637/100‑1 (MQ=255)
                                                                             tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCAGCCGGCATTTGAGCATAGTGCCTGATAAGACGCATCAAGCGTCGCATCAGGcac                        <  1:880214/100‑3 (MQ=25)
                                                                               gCCAGATATAGTATGCCTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGACTGATGCCACGCTTGATGCGTCTTATCATGCCTa                       >  2:901086/1‑99 (MQ=21)
                                                                                ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa                     <  2:257003/100‑1 (MQ=255)
                                                                                ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa                     <  2:1167484/100‑1 (MQ=255)
                                                                                  aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAgg                   >  1:362403/1‑100 (MQ=255)
                                                                                  aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATAAGACGCATCAAGCGTCGCATCAGGcactatgc                   <  1:1188654/100‑8 (MQ=18)
                                                                                     tataGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTg                 >  2:1871886/1‑99 (MQ=255)
                                                                                        aGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAcc             >  2:529046/1‑100 (MQ=255)
                                                                                        aGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAc              <  1:2479046/99‑1 (MQ=255)
                                                                                         gTATGCGTGGGCGGGATAAGGCGTGCACGCCGCATCCGGCATTTGGGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCg            <  1:1009621/100‑1 (MQ=21)
                                                                                          tATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGt           <  1:2923510/100‑1 (MQ=255)
                                                                                           aTGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTa          >  1:1615415/1‑100 (MQ=255)
                                                                                            tGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTAt         <  1:979894/100‑1 (MQ=255)
                                                                                             gCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc        >  1:3407278/1‑100 (MQ=255)
                                                                                             gCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc        >  2:3252954/1‑100 (MQ=255)
                                                                                              cGTAGGCCGGATAAGGCGTTCACGACGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGTGTCTTATCAGGCCTACAGGTGCACCGTATcc       >  2:3048013/1‑100 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCg      <  1:1266350/100‑1 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCg      >  1:725131/1‑100 (MQ=255)
                                                                                                aatGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAGGCGTCTTATCAGGCCTACAGGTGCACCGTATcc       <  2:3494085‑M1/95‑1 (MQ=255)
                                                                                                  tGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa   <  2:1512946‑M1/99‑1 (MQ=255)
                                                                                                   GCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaa  <  2:1656099‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAA  >  NC_000913/4457090‑4457288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.