| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1097283 = | NA (NA) | 18 (0.140) | 10/162 | NT | 100% | intergenic (+454/+282) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | NC_000913 | 1097287 = | 0 (0.000) | intergenic (+458/+278) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
GCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGG > NC_000913/1097188‑1097386 | tttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacag > 1:1722052‑M2/100‑100 (MQ=255)tttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacag > 1:1722174‑M2/100‑100 (MQ=255)tttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacag < 1:72861‑M2/1‑1 (MQ=255)tttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacag > 1:2139082‑M2/100‑100 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttttttttttgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc > 2:940524‑M2/99‑100 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc < 2:3294351‑M2/2‑1 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc < 2:2905932‑M2/2‑1 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc > 1:420411‑M2/99‑100 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc > 1:1891420‑M2/99‑100 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGc > 1:2054876‑M2/99‑100 (MQ=255) ttaaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaacggggggatgagaagccacgaccggggttcgacaactggcgacaGc > 1:852710‑M2/99‑100 (MQ=255) taaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGcc < 1:1087106‑M2/3‑1 (MQ=255) taaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGcc > 2:1195111‑M2/98‑100 (MQ=255) taaagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGcc < 2:1077220‑M2/3‑1 (MQ=255) aagaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggatcgacaactggcgacaGCCAg > 2:1230413‑M2/96‑100 (MQ=255) ngaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGt > 1:2684350‑M2/95‑100 (MQ=255) agaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccctgaccggggttcgacaactggcgacaGccaat < 1:2571993‑M2/6‑3 (MQ=255) agaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGt < 1:1195120‑M2/6‑1 (MQ=255) agaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGt > 2:1264814‑M2/95‑100 (MQ=255) agaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggcgctcgacaactggcgacaGCCAGt > 1:1358711‑M2/95‑100 (MQ=255) gaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGtt > 1:2453749‑M2/94‑100 (MQ=255) gaagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGtt < 1:438168‑M2/7‑1 (MQ=255) gaagagcgcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGt < 1:720298‑M2/6‑1 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtgtattgcacacaccggggggatgagaagccccgaccgggggtcgacaactggctgtcGCCAGTTg < 2:3732285‑M2/8‑1 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGTTg < 2:3782514‑M2/8‑1 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGTTg > 1:3782542‑M2/93‑100 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGTTg < 2:3079701‑M2/8‑1 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGTTg < 1:1756246‑M2/8‑1 (MQ=255) aagagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggcgacaGCCAGTTg < 2:420409‑M2/8‑1 (MQ=255) gagctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTc < 2:422594‑M2/10‑1 (MQ=255) agctcgtacgaaagtacgggcttttttttcgtgtattgcacacaccggggggatgagaagccccgaccgggggtcgacaactggctgtcGCCAGTTGTCg < 2:1231297‑M2/11‑1 (MQ=255) gctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttctacaactggcgacaGCcagtttga > 2:3065099‑M2/89‑95 (MQ=255) gctcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTCGa < 1:2977724‑M2/12‑1 (MQ=255) tcgtacgaaagtacggtcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTCGAAc < 1:1015041‑M2/14‑1 (MQ=255) tcgtacgaaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTCGAAc < 2:2023954‑M2/14‑1 (MQ=255) aaagtacgggcttttttttcgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTCGGACCCCGGTc < 1:1645476‑M2/21‑1 (MQ=255) cgtatattgcacacaccggggggatgagaagccccgaccggggttcgacaactggctgtcGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATcccccc < 1:1735030‑M2/39‑1 (MQ=255) ccgaccgggggtcgacaactggcgacaGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACG‑AAAAAAAAGCCCGTACt > 1:1559933‑M2/28‑100 (MQ=255) atctggttcgacaactggctgtcGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCg < 2:2475031‑M2/77‑1 (MQ=255) ggttcgacaactggctgtcGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACtttcgagat > 1:2475047‑M2/20‑96 (MQ=255) gacaactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctc > 1:2026972‑M2/15‑100 (MQ=255) gacaactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctc > 2:3261764‑M2/15‑100 (MQ=255) gacaactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctc > 2:2691215‑M2/15‑100 (MQ=255) gacaactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctc > 2:2053875‑M2/15‑100 (MQ=255) acaactggcgacaGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctct > 2:592466‑M2/14‑100 (MQ=255) acaactggcgacaGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACG‑AAAAAAAAGCCCGTACTTTCGTACGAGctct > 2:1866422‑M2/14‑100 (MQ=255) acaactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACTagctat > 1:2431598‑M2/14‑98 (MQ=255) caactggcgacaGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCtctt > 2:3733055‑M2/13‑100 (MQ=255) aactggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCtcttc > 1:672593‑M2/12‑100 (MQ=255) actggcgacaGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCtcttct > 1:182406‑M2/11‑100 (MQ=255) actggcgacaGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCtcttct > 1:3015681‑M2/11‑100 (MQ=255) caGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAata > 2:1032125‑M2/3‑100 (MQ=255) GCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATgg > 2:2643951‑M2/1‑100 (MQ=255) GCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTAGTACGAGCTCTTCTTTAAATATgg > 1:1781833‑M2/1‑100 (MQ=255) | GCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACG‑AAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGG > NC_000913/1097188‑1097386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |