New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)14 (0.110) 7/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 214 total aligned reads displayed.

TACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAC  >  NC_000913/2888268‑2888466
                                                                                                   |                                                                                                   
tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACAGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     <  2:1055237/100‑1 (MQ=255)
catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  1:3555028‑M1/67‑100 (MQ=255)
catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  2:3641830‑M1/67‑100 (MQ=255)
catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  2:3763824‑M1/67‑100 (MQ=255)
catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                                                     >  1:1436110‑M1/67‑100 (MQ=255)
 atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                                                    >  2:3618134‑M1/66‑100 (MQ=255)
  tcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                                                   >  1:1391782‑M1/65‑100 (MQ=255)
  ccTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTa                                                                                                   <  1:1481254/100‑1 (MQ=255)
    ttcgttaGTTCGTTGAGGACTTTTAGTTCGAGGGTGAACATAGATTCCTCACTGTTTGCCGTGCCTGATGCGACGCTTACGCGTTCGTATCAGGCCGACa                                                                                                 <  2:895502/94‑1 (MQ=19)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 <  1:893491/100‑1 (MQ=255)
    ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                                                 <  2:537002/100‑1 (MQ=255)
       ggCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGa                                                                                              >  2:3500426/1‑100 (MQ=255)
         cAGTTCGTTCAGGTCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGAcc                                                                                            >  1:2566018/1‑100 (MQ=255)
         cAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGAcc                                                                                            >  1:3451295/1‑100 (MQ=255)
          aGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCg                                                                                           <  1:3164781/100‑1 (MQ=255)
           gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                                                          <  1:250487/100‑1 (MQ=255)
            ttcgttcAGGGCGTTTAGATCGAGTTTAGACATAGATTCCTCACTCTTTGCCTTGCCTCATGCCACGCTCTCGCGTTCTTATCAGGCCTACAAGACCgg                                                                                          <  2:1303073/99‑1 (MQ=38)
             tcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                                                        <  2:530040/100‑1 (MQ=255)
              cggtcAGCGCGGTTAGACCGAGTTCAGCCATAGATTCCTCACTGTTTGCCTTCCGTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                                                       <  2:2034876/97‑1 (MQ=25)
               gttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTg                                                                                      <  2:48417/100‑1 (MQ=255)
                    gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 <  2:1654650/100‑1 (MQ=255)
                    atccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                                                 >  1:1502610‑M1/47‑100 (MQ=255)
                     ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                                                                >  2:3323608/1‑100 (MQ=255)
                     ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                                                                <  2:2631529/100‑1 (MQ=255)
                     ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                                                                <  2:1352718/100‑1 (MQ=255)
                        gTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAAt                                                                             <  1:2171211/100‑1 (MQ=255)
                          ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                                                           <  1:950660/100‑1 (MQ=255)
                          ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                                                           <  1:2005673/100‑1 (MQ=255)
                           tAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                                                          <  2:45215/100‑1 (MQ=255)
                           tAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                                                          <  1:548289/100‑1 (MQ=255)
                           tAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATccc                                                                          <  2:2622871/100‑1 (MQ=255)
                            aGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCca                                                                         >  2:3170356/1‑100 (MQ=255)
                             ggtCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCGGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcan                                                                        <  2:3682421/98‑2 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        <  2:2877784/100‑1 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        >  1:3488485/1‑100 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        >  1:3411071/1‑100 (MQ=255)
                             gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                                                        <  1:2972534/100‑1 (MQ=255)
                                 gAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAAt                                                                    <  1:93373/100‑1 (MQ=255)
                                 gAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAAt                                                                    <  2:3022550/100‑1 (MQ=255)
                                 gAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAAt                                                                    <  2:77648/100‑1 (MQ=255)
                                   gTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCa                                                                  >  1:469183/1‑100 (MQ=255)
                                     ttGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                                                                <  1:3670838/100‑1 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           >  1:617108/1‑100 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           <  2:3007507/100‑1 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           <  2:632925/100‑1 (MQ=255)
                                          cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCg                                                           <  2:1082833/100‑1 (MQ=255)
                                            tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                                                         <  2:2692980/100‑1 (MQ=255)
                                            tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                                                         >  2:147222/1‑100 (MQ=255)
                                              gATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTCAATCCCACAAATCACGCGCCGGa                                                         >  1:3337916/1‑98 (MQ=255)
                                               aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCg                                                      <  1:1066918/100‑1 (MQ=255)
                                                  ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                                                   <  1:1622964/100‑1 (MQ=255)
                                                   cTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCAACAAATCACGCGCCGGGTCGGGCa                                                  >  1:2302757/1‑100 (MQ=255)
                                                        cgatctccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACTAATCACGCGCCGGATCGAGCACCggg                                             <  1:2320798/94‑1 (MQ=255)
                                                         gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc                                            <  2:225727/100‑1 (MQ=255)
                                                          tttGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCg                                           >  1:2347440/1‑100 (MQ=255)
                                                              ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCgggagat                                         >  2:2320783/1‑94 (MQ=255)
                                                              ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg                                       <  1:1717423/100‑1 (MQ=255)
                                                              ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg                                       >  1:2722757/1‑100 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      <  1:1015494/100‑1 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      <  1:1262796/100‑1 (MQ=255)
                                                               cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga                                      >  2:1879532/1‑100 (MQ=255)
                                                                 tgcctGATGCGCCGCTCACGCGTTCTTACCAGGCCTACAGGACCGGGCAGATGGCTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGcatcattc                                     <  2:324141/99‑8 (MQ=255)
                                                                 tgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatgatg                                    >  1:2852842/1‑100 (MQ=255)
                                                                  gcctgataagaacgcgtgagcgtcgcatcaggcCTTCAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  2:3374343‑M2/34‑100 (MQ=255)
                                                                  gcctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  1:3562206‑M2/34‑100 (MQ=255)
                                                                  gcctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  1:834942‑M2/34‑100 (MQ=255)
                                                                  gcctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  2:716422‑M2/34‑100 (MQ=255)
                                                                  GCCTGATGCGACGGTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCAACAAATCACGCGCCGGATCGAGCACCGGGCGAatgat                                     >  2:3138510‑M1/1‑98 (MQ=255)
                                                                  GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   <  2:2812590‑M1/100‑1 (MQ=255)
                                                                   cctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGcc                                  >  1:429505‑M2/33‑100 (MQ=255)
                                                                   CCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGcc                                  <  2:3727954‑M1/100‑1 (MQ=255)
                                                                   CCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc                                   >  2:1398908‑M1/1‑99 (MQ=255)
                                                                   CCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGAGGGTTAATCCCACAAATCTCGCGCCGGATGGAGCACCGGGCGAaagatg                                    <  2:2541193‑M1/98‑1 (MQ=255)
                                                                    ctgataagaacgcgtgagcgtcgcatcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGcc                                  >  2:1539606‑M2/32‑99 (MQ=255)
                                                                    CTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGccc                                 <  1:1188687‑M1/100‑1 (MQ=255)
                                                                    CTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTCAATCCCACACATCACACGCCGGATGGAGCACCGGGCGAATGATGccc                                 <  2:2579660‑M1/100‑1 (MQ=255)
                                                                      GATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACcgggcgaatgagatcgga                               <  2:3470842‑M1/100‑8 (MQ=255)
                                                                          cGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgc                           <  1:783130/100‑1 (MQ=255)
                                                                          cGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgc                           <  2:223833/100‑1 (MQ=255)
                                                                          cGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgc                           <  2:120915/100‑1 (MQ=255)
                                                                           gACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCcgcacgca                          >  2:2059767/1‑100 (MQ=255)
                                                                             cGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCAcc                        <  1:3069751/100‑1 (MQ=255)
                                                                             cGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGACCACCGTGCGAATGATGCCCGcacccacc                        >  2:2431228/1‑100 (MQ=255)
                                                                               cTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGt                      >  1:1413916/1‑100 (MQ=255)
                                                                                      gTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCACGCACGCACCGTAAAGt                 >  1:1360477/1‑98 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGcc             <  1:114616/100‑1 (MQ=255)
                                                                                         cTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCg            <  1:1310273/100‑1 (MQ=255)
                                                                                          ttATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGa           <  1:1921774/100‑1 (MQ=255)
                                                                                            atcaggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAg         >  2:2470969‑M2/8‑100 (MQ=255)
                                                                                              caggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGcc       <  1:1842068‑M2/95‑1 (MQ=255)
                                                                                               aggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCt      >  2:3419798‑M2/5‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  1:722244‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     <  2:1376721‑M2/97‑1 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  1:771907‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     <  2:2753908‑M2/97‑1 (MQ=255)
                                                                                                 gcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCtt     >  2:1014375‑M2/3‑99 (MQ=255)
                                                                                                 gcCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTc    <  2:397418‑M2/98‑1 (MQ=255)
                                                                                                  cCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCa   >  1:1727929‑M2/2‑100 (MQ=255)
                                                                                                  cCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCa   >  2:3482‑M2/2‑100 (MQ=255)
                                                                                                   cTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAc  >  2:1245926/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGCCCGCACGCACCGTAAAGTCGCCGAAGCCTTCAC  >  NC_000913/2888268‑2888466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.