| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4035360 | NA (NA) | 37 (0.290) | 13/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 | tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:3809618‑M2/1‑100 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:2991759‑M2/1‑100 (MQ=255) ccTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACACCGCGCCGCTGAGAAAAAGCGAAGCGGC < 2:565293‑M2/99‑1 (MQ=255) cAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGgtgtgcataatacgccttcccgct < 1:2039292‑M2/100‑25 (MQ=255) aGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttat < 2:2661626‑M2/100‑48 (MQ=255) cGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttc < 1:3516781‑M2/100‑58 (MQ=255) acacCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggag < 1:1809128‑M2/100‑68 (MQ=255) acCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagtt < 2:121274‑M2/100‑70 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGgtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1239094‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:953346‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 2:1547062‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:655680‑M2/100‑71 (MQ=255) cccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttct < 1:3032852‑M2/100‑72 (MQ=255) cccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttct < 2:2319150‑M2/100‑72 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:738067‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 2:2911373‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:2415311‑M2/100‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgttttctctgccggagttatca < 2:852742‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:524332‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtctgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:329533‑M2/99‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:686620‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:2509707‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:3530071‑M2/100‑74 (MQ=255) gcgcCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaaggatgtatttttgctttctctgccggaggtatcag < 2:2777295‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:2482141‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:3491342‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:1330442‑M2/100‑75 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1225695‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:3091778‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:3373382‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:835730‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1400932‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:688198‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcacttatttttgctttctctgccggaggtctcagg < 2:3538798‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggcgtgcataatacgccatcccgctacagagtcaagcatttattttggctttctctgccggagttccaagg < 2:3267285‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:1339444‑M2/100‑76 (MQ=255) ccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcgagcattaatttttgctttctctgccggagttctcaggag < 2:2682389‑M2/100‑78 (MQ=255) cgcTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgcctgagttctcaggaga < 2:2995829‑M2/100‑79 (MQ=255) aaaaaGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgc > 2:1225686‑M2/1‑15 (MQ=255) aaaaaGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgc > 1:2661645‑M2/1‑15 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 1:3191631‑M2/100‑95 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 1:2068099‑M2/100‑95 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 1:2040495‑M2/100‑95 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc > 2:75857‑M2/1‑6 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg < 1:929365‑M2/100‑97 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc > 2:3660223‑M2/1‑3 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagcgtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg > 2:605769‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:3736735‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:586307‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 2:2555631‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 2:1205708‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:1076415‑M2/1‑2 (MQ=255) cgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgt < 1:2288884‑M2/100‑100 (MQ=255) cgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgt < 1:2222223‑M2/100‑100 (MQ=255) | TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |