New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4490231156 (1.140)10 (0.080) 9/170 NT 6.3% coding (909/999 nt) idnR transcriptional repressor, 5‑gluconate‑binding
?NC_000913 = 4490243 150 (1.150)coding (897/999 nt) idnR transcriptional repressor, 5‑gluconate‑binding
Rejected: Frequency below cutoff threshold.

Only 100 of 181 total aligned reads displayed.

AGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCTGG  >  NC_000913/4490145‑4490341
                                                                                                  |                                                                                                  
aGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAc                                                                                                   >  2:1936181‑M2/1‑99 (MQ=255)
   gtgtTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGAccaa                                                                                                <  2:459789‑M2/100‑5 (MQ=255)
     gtTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAata                                                                                              >  2:3788825/1‑100 (MQ=255)
     gtTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAata                                                                                              >  1:1276772/1‑100 (MQ=255)
      ttGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTTGTTGTGATCGTTATTTTTAATTTTTCTCAGCAACATTTTGGCGCCCATCCGACCAata                                                                                              <  2:622544/99‑1 (MQ=255)
      ttGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAatat                                                                                             <  2:1579643/100‑1 (MQ=255)
        gCCGTGATAAATCTGATACCCGAGGTCGACAGTGTTGCGGTTGTGATCCTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAatat                                                                                             <  2:329700/98‑1 (MQ=255)
         ccGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaa                                                                                          >  1:924977/1‑100 (MQ=255)
          cGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaa                                                                                         <  2:3096138/100‑1 (MQ=255)
           gTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCaaaa                                                                                        <  2:1443799/100‑1 (MQ=255)
            tGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAAc                                                                                       <  2:3686509/100‑1 (MQ=255)
             gATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACg                                                                                      >  1:2940695/1‑100 (MQ=255)
             gATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACg                                                                                      <  2:1124777/100‑1 (MQ=255)
             gATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACg                                                                                      >  1:3520322/1‑100 (MQ=255)
               tAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACggg                                                                                    >  1:1738327/1‑100 (MQ=255)
                aaaTCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCTGAGTAATAGCAAAACgggg                                                                                   >  2:2499024/1‑100 (MQ=255)
                 naTCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGa                                                                                  >  1:1762267/2‑100 (MQ=255)
                  aTCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAg                                                                                 >  1:1343819/1‑100 (MQ=255)
                     tGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTa                                                                               >  2:1552565/1‑99 (MQ=255)
                      gATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGTGGCCATCCGACCAATATCAAAACGGGGAGTAAt                                                                             <  1:1417145/100‑1 (MQ=255)
                        tACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTa                                                                           <  1:77131/100‑1 (MQ=255)
                        tACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTa                                                                           <  1:1070888/100‑1 (MQ=255)
                        tACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTa                                                                           <  2:1958182/100‑1 (MQ=255)
                         aCCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTAc                                                                          >  2:2477304/1‑100 (MQ=255)
                          cccGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACg                                                                         >  1:1086410/1‑100 (MQ=255)
                          cccGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACg                                                                         >  1:1254888/1‑100 (MQ=255)
                           ccGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGc                                                                        >  1:413208/1‑100 (MQ=255)
                           ccGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGc                                                                        >  1:3502093/1‑100 (MQ=255)
                               ggTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGc                                                                    <  2:555569/100‑1 (MQ=255)
                               ggTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGc                                                                    >  1:3029315/1‑100 (MQ=255)
                                gTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCg                                                                   <  1:3059231/100‑1 (MQ=255)
                                  cAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAg                                                                 >  1:456575/1‑100 (MQ=255)
                                  cAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAg                                                                 >  1:3789576/1‑100 (MQ=255)
                                  cAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAg                                                                 >  2:355242/1‑100 (MQ=255)
                                  cAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAg                                                                 >  1:3597235/1‑100 (MQ=255)
                                       gtgtTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTg                                                            >  2:3493647/1‑100 (MQ=255)
                                       gtgtTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTg                                                            <  2:2008661/100‑1 (MQ=255)
                                        tgttgtGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTgg                                                           <  1:3476509/100‑1 (MQ=255)
                                        tgttgtGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTg                                                            >  2:2413234/1‑99 (MQ=255)
                                           tgtggttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGAt                                                        >  1:1596476/1‑100 (MQ=255)
                                            gtggttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATc                                                       >  2:582278/1‑100 (MQ=255)
                                              ggttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCAt                                                     >  1:3818633/1‑100 (MQ=255)
                                              ggttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCAt                                                     >  2:2747129/1‑100 (MQ=255)
                                              ggttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCAt                                                     >  2:332987/1‑100 (MQ=255)
                                              ggttgtgATCGTTATTTTCAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCAt                                                     >  2:2147509/1‑100 (MQ=255)
                                                ttgtgATCGTTATTTTTCATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGTCTTGCTATCAtt                                                    <  2:357366/99‑1 (MQ=255)
                                                ttgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCAttt                                                   <  1:583404/100‑1 (MQ=255)
                                                 tgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtg                                                  <  1:3229627/100‑1 (MQ=255)
                                                 tgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtg                                                  <  2:3450657/100‑1 (MQ=255)
                                                 tgtgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtg                                                  <  1:2320239/100‑1 (MQ=255)
                                                   tgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtgcc                                                <  1:3318108/100‑1 (MQ=255)
                                                   tgATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtgcc                                                <  2:2964027/100‑1 (MQ=255)
                                                    gATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtgcc                                                >  2:2865106/1‑99 (MQ=255)
                                                      tCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTtgcctgc                                             <  2:754792/100‑1 (MQ=255)
                                                      tCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCCGGCGAGGCTTGGGATCATTtgcctgc                                             <  1:2330341/100‑1 (MQ=255)
                                                       cGTTATTTTTAATTTTGCTCAGCAACATTTTGGCGGCCATCCGACCAATATCAAACCGGGGAGTAATTACGCTGGCGAGGCTTGTGATCATTtgcctgcc                                            <  2:2850219/100‑1 (MQ=255)
                                                        gTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCa                                           >  2:2959619/1‑100 (MQ=255)
                                                        gTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCa                                           >  1:2344156/1‑100 (MQ=255)
                                                           aTTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtc                                        >  2:2487544/1‑100 (MQ=255)
                                                           aTTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtc                                        >  2:2422043/1‑100 (MQ=255)
                                                             ttttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtctc                                      >  1:2135787/1‑100 (MQ=255)
                                                             ttttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtctc                                      >  1:2439250/1‑100 (MQ=255)
                                                             ttttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtctc                                      <  2:3399479/100‑1 (MQ=255)
                                                              tttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAAtctcn                                     <  1:1908140/100‑2 (MQ=255)
                                                              tttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTcc                                     <  1:1812347/100‑1 (MQ=255)
                                                              tttAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTcc                                     <  1:1909592/100‑1 (MQ=255)
                                                                  aTTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGcc                                 <  1:1819278/100‑1 (MQ=255)
                                                                  aTTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGcc                                 <  1:1121265/100‑1 (MQ=255)
                                                                     ttGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCAt                              <  2:3537873/100‑1 (MQ=255)
                                                                     ttGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCAt                              >  1:2032155/1‑100 (MQ=255)
                                                                        cTCAGCAACATTTGGGCGGCCATCCGAccaaatgttgctgagcaaaattaaaaataacgatcacaaccacaacactgttgacctcgggtatcagatttat                           <  1:206432‑M2/100‑74 (MQ=255)
                                                                        cTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTCATTACGCTGGCAAGGCTTGGGAACATTTGCCTGCCAATCTCCAGCCCATGaa                           >  2:3032323/1‑100 (MQ=255)
                                                                        cTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGaa                           >  1:2190040/1‑100 (MQ=255)
                                                                          cAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGaaaa                         >  1:1259413/1‑100 (MQ=255)
                                                                          cAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGaaaa                         >  2:1912556/1‑100 (MQ=255)
                                                                          cAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGaaaa                         >  1:368594/1‑100 (MQ=255)
                                                                           aGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATTATTTGCCTGCCAATCTCTAGCCCATGaaatc                        <  1:2571392/100‑3 (MQ=255)
                                                                           aGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAAc                        >  1:2086266/1‑100 (MQ=255)
                                                                           aGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCACGaaaa                         >  1:1603004/1‑99 (MQ=255)
                                                                            gCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAAcc                       >  1:78998/1‑100 (MQ=255)
                                                                            gCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAAcc                       >  2:485528/1‑100 (MQ=255)
                                                                              aaCATTTGGGCGGCCATCCGAccaaatgttgctgagcaaaattaaaaataacgatcacaaccacaacactgttgacctcgggtatcagatttatcacggc                     <  2:3170542‑M2/100‑80 (MQ=255)
                                                                               aCATTTGGGCGGCCATCCGAccaaatgttgctgagcaaaattaaaaataacgatcacaaccacaacactgttgacctcgggtatcagatttatcacggca                    <  2:504989‑M2/100‑81 (MQ=255)
                                                                               aCATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGc                    >  1:1515765/1‑100 (MQ=255)
                                                                               aCATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGAGCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGc                    <  1:1614730/100‑1 (MQ=255)
                                                                                cATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTACTTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCa                   >  2:696497/1‑100 (MQ=255)
                                                                                 aTTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCaa                  >  1:740551/1‑100 (MQ=255)
                                                                                   ttGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATg                <  2:235454/100‑1 (MQ=255)
                                                                                     gggCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGa              <  2:3523606/100‑1 (MQ=255)
                                                                                      ggcggcCATCCGAccaaatgttgctgagcaaaattaaaaataacgatcacaaccacaacactgttgacctcgggtatcagatttatcacggcaacacgct             <  1:1182152‑M2/100‑88 (MQ=255)
                                                                                       gcggcCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGaaa            >  2:2802683/1‑100 (MQ=255)
                                                                                         ggcCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAAtt          <  1:3450471/100‑1 (MQ=255)
                                                                                         ggcCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAAtt          <  1:281254/100‑1 (MQ=255)
                                                                                             aTCCAACCAATAGCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCAGGAAAACCCGCAATGGAAGTTTGtt      >  2:1964704/1‑100 (MQ=255)
                                                                                              tCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCAAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGtt      >  2:831255/1‑99 (MQ=255)
                                                                                              tCCGACAAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTc     <  2:1648633/100‑1 (MQ=255)
                                                                                                cGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCTg   <  2:1084005/100‑1 (MQ=255)
                                                                                                 gACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCtag  >  1:1970734/1‑98 (MQ=255)
                                                                                                 gACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCTgg  <  1:933593/100‑1 (MQ=255)
                                                                                                 gACCAATAGCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCTg   <  2:1084006/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
AGCGTGTTGCCGTGATAAATCTGATACCCGAGGTCAACAGTGTTGTGGTTGTGATCGTTATTTTTAATTTTGCTCAGCAACATTTGGGCGGCCATCCGACCAATATCAAAACGGGGAGTAATTACGCTGGCGAGGCTTGGGATCATTTGCCTGCCAATCTCCAGCCCATGAAAACCCGCAATGGAAATTTGTTCTGG  >  NC_000913/4490145‑4490341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.