BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4571450	155 (1.130)	12 (0.090)	6/166	NT	7.8%	coding (125/1413 nt)	yjiR	putative DNA‑binding transcriptional regulator/putative aminotransferase
*	?	NC_000913	= 4571464	141 (1.110)	12 (0.090)	6/166	NT	7.8%	coding (111/1413 nt)	yjiR	putative DNA‑binding transcriptional regulator/putative aminotransferase
Rejected: Frequency below cutoff threshold.

Only 100 of 188 total aligned reads displayed.

TTTACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGCCAGATGTTGA  >  NC_000913/4571365‑4571563

tttACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACg                                                                                                     >  1:830692/1‑100 (MQ=255)

tttACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACg                                                                                                     >  1:3347376/1‑100 (MQ=255)

 ttACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGc                                                                                                    >  2:1530312‑M2/1‑99 (MQ=255)

  tACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATAAGCCTGCTGCACGGTGCTGATACTGACGcc                                                                                                   <  2:2295908‑M2/100‑3 (MQ=255)

    cGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGccgt                                                                                                 <  1:2076337‑M2/100‑5 (MQ=255)

    cGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGccgt                                                                                                 >  1:890384‑M2/1‑96 (MQ=255)

     gTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGccgtg                                                                                                >  1:3711280‑M2/1‑95 (MQ=255)

        gtgCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTc                                                                                             <  1:807479/100‑1 (MQ=255)

         tgCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTcc                                                                                            <  1:639794/100‑1 (MQ=255)

         tgCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTcc                                                                                            <  2:1358189/100‑1 (MQ=255)

         tgCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTcc                                                                                            <  2:2696604/100‑1 (MQ=255)

         ccgatctaaaTAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTcc                                                                                            <  1:2475791/93‑1 (MQ=255)

          gCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTcc                                                                                            >  1:1089604/1‑99 (MQ=255)

          gCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCt                                                                                           >  2:1271680/1‑100 (MQ=255)

           cGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGccgtgccgct                                                                                           <  1:1501879‑M2/99‑11 (MQ=255)

           cGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTg                                                                                          <  2:2938476/100‑1 (MQ=255)

           cGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTg                                                                                          >  1:3144755/1‑100 (MQ=255)

           cGACAAAATAACCCGAACGCGGCTGCGGAGGGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTg                                                                                          >  1:3127121/1‑100 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  2:406261/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  1:1406752/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  1:1345145/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  2:1621276/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  2:2657913/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGAc                                                                                        <  2:2285354/100‑1 (MQ=255)

             aCAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCCTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGCCGCCGTGCTCCTGAc                                                                                        <  1:174634/100‑1 (MQ=255)

              cAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCTTCTCCATCGTCTGATACGCCTGCTGCACGGGTCTGATACTGACGCCGTGCTCCTGACt                                                                                       >  2:100266/1‑100 (MQ=255)

              cAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACt                                                                                       <  1:3391625/100‑1 (MQ=255)

              cAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACt                                                                                       <  2:2109372/100‑1 (MQ=255)

                aaaTAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTccagatcgg                                                                                     >  2:2475775/1‑93 (MQ=255)

                aaaTAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTa                                                                                     >  1:1547618/1‑100 (MQ=255)

                   tAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGc                                                                                  >  1:2601508/1‑100 (MQ=255)

                       ccGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTgcg                                                                              <  1:3208371/100‑1 (MQ=255)

                       ccGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTgcg                                                                              <  2:1211381/100‑1 (MQ=255)

                       ccGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTgcg                                                                              <  1:1143327/100‑1 (MQ=255)

                              cgGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGAc                                                                       >  1:305137/1‑100 (MQ=255)

                              cgGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGAc                                                                       <  1:2822676/100‑1 (MQ=255)

                               ggCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACg                                                                      <  2:1915980/100‑1 (MQ=255)

                               ggCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACg                                                                      <  1:1628356/100‑1 (MQ=255)

                               ggCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACg                                                                      >  2:2859824/1‑100 (MQ=255)

                                gCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACgg                                                                     >  1:2985527/1‑100 (MQ=255)

                                 cTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGAc                                                                       >  2:2166331/1‑97 (MQ=255)

                                 cTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGc                                                                    <  2:3127097/100‑1 (MQ=255)

                                 cTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGc                                                                    <  1:3279705/100‑1 (MQ=255)

                                   gCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTTCACGGTACTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCaa                                                                  <  1:3677557/100‑1 (MQ=255)

                                   gCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCaa                                                                  <  1:2665466/100‑1 (MQ=255)

                                    cGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAAt                                                                 >  1:398084/1‑100 (MQ=255)

                                       aGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTtc                                                              <  1:1695751/100‑1 (MQ=255)

                                         tgatgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTtctc                                                            >  1:540105/1‑100 (MQ=255)

                                          gatgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTcc                                                           >  2:2616030/1‑100 (MQ=255)

                                          gatgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTcc                                                           <  2:3108942/100‑1 (MQ=255)

                                           atgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTccc                                                          <  2:1644881/100‑1 (MQ=255)

                                            tgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTcccc                                                         <  1:1029752/100‑1 (MQ=255)

                                            tgaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTcccc                                                         >  1:2520585/1‑100 (MQ=255)

                                             gaGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCg                                                        <  1:1120158/100‑1 (MQ=255)

                                                cTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGa                                                     >  1:1173690/1‑100 (MQ=255)

                                                  tCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACg                                                   <  2:1765220/100‑1 (MQ=255)

                                                  tCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACg                                                   <  1:28590/100‑1 (MQ=255)

                                                  tCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCCGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACg                                                   <  1:29372/100‑1 (MQ=255)

                                                       ntctcCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATa                                                >  2:636438/2‑98 (MQ=255)

                                                       gTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACa                                              >  2:3761071/1‑100 (MQ=255)

                                                       gTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACa                                              >  1:2921315/1‑100 (MQ=255)

                                                         ctcCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGc                                            <  1:1622436/100‑1 (MQ=255)

                                                         ctcCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGc                                            >  1:2299454/1‑100 (MQ=255)

                                                            cAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCt                                         >  1:2662074/1‑100 (MQ=255)

                                                             aGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCtt                                        <  1:1025005/100‑1 (MQ=255)

                                                              gCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTg                                       >  1:1273505/1‑100 (MQ=255)

                                                                 tCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTc                                    <  1:2616049/100‑1 (MQ=255)

                                                                 tCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTc                                    <  1:354226/100‑1 (MQ=255)

                                                                 tCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTc                                    >  1:882943/1‑100 (MQ=255)

                                                                   tGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCaa                                  >  1:1413977/1‑100 (MQ=255)

                                                                      tACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATcc                               >  2:3434359/1‑100 (MQ=255)

                                                                      tACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATcc                               >  2:208443/1‑100 (MQ=255)

                                                                       aCGCCTGCTGCACGGTGCTGATACTGACGccgtgcagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttatttt                              <  1:1400610‑M2/100‑72 (MQ=255)

                                                                       aCGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATc                                <  2:3684341/98‑1 (MQ=255)

                                                                        cGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGACCTTGCTCAATCCGt                             >  1:3763514/1‑100 (MQ=255)

                                                                           ctgctgCACGGTGCTGATATTGACGCCGTGCTCCTGGCTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCg                          <  2:1171461/100‑1 (MQ=255)

                                                                           ctgctgCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTc                           <  2:3451986/99‑1 (MQ=255)

                                                                           ctgctgCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCg                          <  1:1442436/100‑1 (MQ=255)

                                                                           ctgctgCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCg                          <  1:3186491/100‑1 (MQ=255)

                                                                           ctgctgCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCg                          <  1:3641664/100‑1 (MQ=255)

                                                                             gctgcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGc                        >  1:2103786/1‑100 (MQ=255)

                                                                             gctgcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGc                        <  1:932655/100‑1 (MQ=255)

                                                                              ctgcACGGTGCTGATACTGACGccgtgcagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttattttgtcgcac                       <  2:2200981‑M2/100‑79 (MQ=255)

                                                                              ctgcACGGTGCTGATACTGACGccgtgcagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttattttgtcgcac                       <  1:1471513‑M2/100‑79 (MQ=255)

                                                                              ctgcACGGTGCTGATACTGACGccgtgcagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttattttgtcgcac                       <  1:711988‑M2/100‑79 (MQ=255)

                                                                              ctgcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCa                       <  1:3011033/100‑1 (MQ=255)

                                                                               tgcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCaa                      >  2:1818619/1‑100 (MQ=255)

                                                                               tgcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCaa                      >  2:702582/1‑100 (MQ=255)

                                                                                gtacgGTGCTGATACTGACGccgtgcagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttattttgtcgcacaa                     <  2:2699430‑M2/98‑81 (MQ=255)

                                                                                gcACGGTGCTGATACTGACGccgtgtagcaggcgtatcagacgctggagacgatgaagctcatcactccgcagccgcgttcgggttattttgtcgcacaa                     <  2:1114646‑M2/100‑81 (MQ=255)

                                                                                gcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAg                     <  2:2601489/100‑1 (MQ=255)

                                                                                gcACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAg                     >  2:963053/1‑100 (MQ=255)

                                                                                   cGGTGCTGATACTGACGCCGTGCTGCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCag                  <  2:3202995/100‑1 (MQ=255)

                                                                                   cGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCag                  >  1:2356085/1‑100 (MQ=255)

                                                                                     gTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCagan                <  2:1832331/100‑2 (MQ=255)

                                                                                     gTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCagag                <  2:2723588/100‑1 (MQ=255)

                                                                                          gATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCACTTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGcc           >  1:1893727/1‑100 (MQ=255)

                                                                                          gATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGcc           >  1:342387/1‑100 (MQ=255)

                                                                                              cTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGCCAGAt       >  1:2416428/1‑100 (MQ=255)

                                                                                              cTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGCCAGAt       >  2:943194/1‑100 (MQ=255)

TTTACGTTGTGCGACAAAATAACCCGAACGCGGCTGCGGAGTGATGAGCTTCATCGTCTCCAGCGTCTGATACGCCTGCTGCACGGTGCTGATACTGACGCCGTGCTCCTGACTTAAGCTGCGCACCGACGGCAATTTCTCCCCGTGACGATACAGCCCTTGCTCAATCCGTTCGGCAAGCAGAGTCGCCAGATGTTGA  >  NC_000913/4571365‑4571563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.