Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,391,417 C→G 19.9% W30S (TGG→TCG)  nuoN ← NADH:ubiquinone oxidoreductase, membrane subunit N

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,391,4170CG19.9% 325.9 / 80.9 141W30S (TGG→TCG) nuoNNADH:ubiquinone oxidoreductase, membrane subunit N
Reads supporting (aligned to +/- strand):  ref base C (44/69);  new base G (16/12);  total (60/81)
Fisher's exact test for biased strand distribution p-value = 9.14e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.87e-01

Only 100 of 143 total aligned reads displayed.

ACGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACG  >  NC_000913/2391318‑2391516
                                                                                                   |                                                                                                   
 cGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCa                                                                                                    >  1:1221747/1‑100 (MQ=255)
 cGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCa                                                                                                    >  2:3032773/1‑100 (MQ=255)
   tCCAGAGCGACCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATTATTGCGTCGCCACg                                                                                                  <  2:688594/100‑1 (MQ=255)
    ccATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGc                                                                                                 <  2:1206785/100‑1 (MQ=255)
        aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtc                                                                                             <  1:1557807/100‑2 (MQ=255)
        aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATg                                                                                             >  1:2130898/1‑100 (MQ=255)
        aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATg                                                                                             <  1:862827/100‑1 (MQ=255)
        aGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAAGAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtc                                                                                             <  2:358603/100‑2 (MQ=255)
         gcgcCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATgg                                                                                            <  1:239324/100‑1 (MQ=255)
          cgcccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATgg                                                                                            <  2:1467833/99‑1 (MQ=255)
           gcccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatt                                                                                          <  1:2132336/100‑5 (MQ=255)
           gcccgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGgag                                                                                          <  2:2782682/100‑1 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  1:2169576/100‑8 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  2:1398907/100‑8 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  1:1581208/100‑8 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  2:2327281/100‑8 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  1:1174936/100‑8 (MQ=255)
              cgccTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcc                                                                                       <  1:2468114/100‑8 (MQ=255)
              cgccCGGCCAACAAACCAGAGGGAAAACAGCGCCGCGTTAAGACCAGTAACCGTAACCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATgg                                                                                            <  2:2080768/95‑1 (MQ=255)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAGGCCCAATAACCGAGAGCGTAGCGTTGAGGAAACGATTGCGTCGCCACGCAATGGAGAGCATc                                                                                    <  1:2462276/100‑1 (MQ=255)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGCGAGCGAAGCGCTGAGGAAATGCATGCGTCGCCACGCAATGGAGAGCATc                                                                                    >  2:798793/1‑100 (MQ=255)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTGGCGACGCAAtcatttcctta                                                                                    <  1:2589312/100‑11 (MQ=38)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATc                                                                                    <  1:1064825/100‑1 (MQ=255)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATc                                                                                    <  2:536073/100‑1 (MQ=255)
                 cTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATc                                                                                    <  1:1733744/100‑1 (MQ=255)
                  tGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATca                                                                                   <  1:312036/100‑1 (MQ=255)
                   ggCCAACAAACCAGAGCGAAACCAGCGACGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATc                                                                                    <  2:3401688/98‑1 (MQ=255)
                    gCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATcaca                                                                                 <  2:3820070/100‑1 (MQ=255)
                     cgaacaaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACaa                                                                                <  2:1317434/98‑1 (MQ=255)
                      caacaaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAac                                                                               <  2:1355884/100‑1 (MQ=255)
                       aacaaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAacc                                                                              <  2:88225/100‑1 (MQ=255)
                        acaaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAacca                                                                             <  2:2271860/100‑1 (MQ=255)
                         caaACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGTGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAaccac                                                                            >  1:994295/1‑100 (MQ=255)
                          aaaCCAGGGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGCGAGCGTAGCGTTCAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAaccacc                                                                           <  2:2633570/100‑1 (MQ=255)
                            aCCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATcaagatcggaag                                                                         >  2:1205697/1‑90 (MQ=255)
                            aCCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAaccaccac                                                                         <  2:3567519/100‑1 (MQ=255)
                             ccAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAaccaccacc                                                                        <  1:1478577/100‑1 (MQ=255)
                                nagCGAAACCAGCGCCGCGTTCAGCCCAATAACCGAGAGCGAAGCGACGAGGAAATGATGGAGTCGCCACGCAATGCAGAGCATCACAaccaccagc                                                                        >  2:2291726/2‑95 (MQ=255)
                                gagCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTc                                                                     <  2:265546/100‑1 (MQ=255)
                                 agCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCa                                                                    <  1:3032797/100‑1 (MQ=255)
                                  gCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTCGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCaa                                                                   >  2:433330/1‑100 (MQ=255)
                                   cGAAACCAGCGCCGCGTTAAGCCCAATATCCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAg                                                                  <  1:488082/100‑1 (MQ=255)
                                   cGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAg                                                                  <  2:1138826/100‑1 (MQ=255)
                                     aaaCCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGcc                                                                <  2:279404/100‑1 (MQ=255)
                                        ccAGCGCCGCGTTAAACGCAATTACCGAGAGCGTAGCGTTGAGGAAACGATTGCGTCGCCACGCAATGGAGAGCATCACACCCACCACCGTCAAGCtgac                                                             <  2:3082785/100‑1 (MQ=255)
                                         cAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCcgacg                                                            >  2:387333/1‑100 (MQ=255)
                                         cAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCcgacg                                                            >  1:2792657/1‑100 (MQ=255)
                                         cAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCcgac                                                             <  1:1882814/99‑1 (MQ=255)
                                             gccgcGTTAAGCCCAATAACCGAGAGCGTAGCGTTGGGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCa                                                        >  1:2697520/1‑100 (MQ=255)
                                             gccgcGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCa                                                        <  1:2003502/100‑1 (MQ=255)
                                             gccgcGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCa                                                        <  2:1836494/100‑1 (MQ=255)
                                               cgcgTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGc                                                      <  1:436809/100‑1 (MQ=255)
                                               cgcgTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGc                                                      <  1:3350181/100‑1 (MQ=255)
                                               cgcgTTAAGCCAAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATTGAGAGCATCACAACCGCCACCGTCAAGCCGTCGATCa                                                        <  2:2033105/98‑1 (MQ=255)
                                                  gTTAAGCACAATAACCGAGAGCGTAGCGTAGAGTAAATGATGCCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGAt                                                          <  2:1102384/93‑1 (MQ=255)
                                                    tAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACgg                                                 <  1:2148517/100‑1 (MQ=255)
                                                      aGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTa                                               <  1:3185320/100‑1 (MQ=255)
                                                       gCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGCGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAg                                              >  2:2437765/1‑100 (MQ=255)
                                                       gCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAg                                              <  2:601259/100‑1 (MQ=255)
                                                       gCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGACTGCGTCGCCACGCAATGGAGAGCATCAAAACCACCACCGTCAAGCCGACGATCAGCAACGGTa                                               >  2:1646828/1‑99 (MQ=255)
                                                             tAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGc                                        <  2:1821492/100‑1 (MQ=255)
                                                                ccGAGAGCGTAGCGGTGAGGAAATGATTGCGTCGCCACGCAATGGAGCGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGAt                                     >  2:1951092/1‑100 (MQ=255)
                                                                  gagaGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGCTCAGCAACGGTAGCAGTGCGATCa                                   >  1:3187222/1‑100 (MQ=255)
                                                                    gagCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAgg                                 <  2:1392499/100‑1 (MQ=255)
                                                                    gagCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATAGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAgg                                 <  1:1938445/100‑1 (MQ=255)
                                                                         tagcgtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGttt                              <  1:1920018/98‑1 (MQ=255)
                                                                         tagcgtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTtg                            >  2:3344825/1‑100 (MQ=255)
                                                                          agcgtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTtgt                           <  2:924332/100‑1 (MQ=255)
                                                                             gtTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGa                        <  1:1028775/100‑1 (MQ=255)
                                                                              ttGAGGAAATGATTGCGTCGCCACGCAATGGAGCGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAg                       <  2:2917184/100‑1 (MQ=255)
                                                                              ttGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAg                       <  2:57681/100‑1 (MQ=255)
                                                                                gAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGtt                     >  2:901179/1‑100 (MQ=255)
                                                                                gAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGAAGTGCGATCAGGTTTTGTGGAGtt                     >  1:574382/1‑100 (MQ=255)
                                                                                atgctctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGtt                     >  1:540618/10‑100 (MQ=38)
                                                                                 tgctctccaTTGCGTGGCGACGCAATGGAGAGCATCACCACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTa                    >  2:1519197/9‑100 (MQ=38)
                                                                                  ggAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTAt                   >  1:1767866/1‑100 (MQ=255)
                                                                                   ctctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTAtt                  >  1:583760/7‑100 (MQ=255)
                                                                                    tctccaTTGCGTGGCGACGCAATGGAGAGCATCACACCCACCACCGTCCAGCCGACGATCGGCACCGGTAGCAGCGCGATCAGGCTTTGTGGAGCTa                    >  2:898100/6‑97 (MQ=255)
                                                                                    tctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTAtt                  >  1:3284828/6‑99 (MQ=255)
                                                                                    tctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTg                 >  2:2512623/6‑100 (MQ=255)
                                                                                    tctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTg                 >  1:388815/6‑100 (MQ=255)
                                                                                    aaaTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTg                 <  2:3279347/100‑1 (MQ=255)
                                                                                     ctccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGt                >  2:2239970/5‑100 (MQ=255)
                                                                                     aaTGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGt                <  1:875391/100‑1 (MQ=255)
                                                                                      tccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTc               >  1:3058720/4‑100 (MQ=255)
                                                                                      tccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTc               >  1:2076047/4‑100 (MQ=255)
                                                                                       ccaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCa              >  2:1504545/3‑100 (MQ=255)
                                                                                        caTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCAt             >  2:1438867/2‑100 (MQ=255)
                                                                                        aaTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGGAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCa              >  2:1336157/2‑99 (MQ=255)
                                                                                         aTTGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATAAGCAACGGTAGCAGTGCGATCAGGCTTTGTGGAGTTATTGTCATg            >  2:1687685/1‑100 (MQ=255)
                                                                                          ttGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATgg           >  1:2629685/1‑100 (MQ=255)
                                                                                          ttGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATgg           <  1:1286878/100‑1 (MQ=255)
                                                                                           tGCGTGGCGACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGc          <  2:583754/100‑1 (MQ=255)
                                                                                            gCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCg         >  1:955385/1‑100 (MQ=255)
                                                                                                cGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTCCGATCAGGTCTTGCGGAGTTCTTGTCATGGCGAttt     >  2:1510793/1‑100 (MQ=255)
                                                                                                cGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAAAGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGAtt      >  1:1708497/1‑99 (MQ=255)
                                                                                                 gCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGAtt      <  2:2148482/98‑1 (MQ=255)
                                                                                                 gCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTa    >  2:1496099/1‑100 (MQ=255)
                                                                                                 gCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTa    <  2:1715637/100‑1 (MQ=255)
                                                                                                   cACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACg  >  1:1618956/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACGTCCATAGCGCCCGCCTGGCCAACAAACCAGAGCGAAACCAGCGCCGCGTTAAGCCCAATAACCGAGAGCGTAGCGTTGAGGAAATGATTGCGTCGCCACGCAATGGAGAGCATCACAACCACCACCGTCAAGCCGACGATCAGCAACGGTAGCAGTGCGATCAGGTTTTGTGGAGTTATTGTCATGGCGATTTACG  >  NC_000913/2391318‑2391516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: