| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,767,667 | T→G | 16.8% | intergenic (+312/‑43) | rnlB → / → yfjP | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,767,667 | 0 | T | G | 16.8% | 365.9 / 72.4 | 160 | intergenic (+312/‑43) | rnlB/yfjP | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| Reads supporting (aligned to +/- strand): ref base T (72/60); new base G (17/10); total (90/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.26e-01 | |||||||||||
Only 100 of 162 total aligned reads displayed.
TGGTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCGCTA > NC_000913/2767569‑2767766 | ggTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTcg > 2:2704882/1‑100 (MQ=255) ggTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTcg > 1:2846746/1‑100 (MQ=255) gTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTcgc < 1:2496825/100‑1 (MQ=255) cTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGt < 1:244709/100‑1 (MQ=255) tgtgAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGtt > 1:388498/1‑100 (MQ=255) tgAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTc > 2:3371284/1‑99 (MQ=255) tgAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCt > 1:2061689/1‑100 (MQ=255) gAGTTCAGAAAGATTCTGCACTCTATGTGCATTGAAAAAATCTTCAGATAGCTATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCt > 2:670592/1‑99 (MQ=255) gAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTg > 2:1144706/1‑100 (MQ=255) gAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTg < 1:580895/100‑1 (MQ=255) aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATGCGATGAACGGCAGAACCTCGCGGTTCTGc > 2:1674168/1‑100 (MQ=255) aGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGc < 1:3764112/100‑1 (MQ=255) tCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGt > 2:332664/1‑100 (MQ=255) ctgAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGtt < 1:2089570/98‑1 (MQ=255) aGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGttt > 2:1286385/1‑100 (MQ=255) aGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGttc < 2:2418038/100‑2 (MQ=255) gAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACATCGCGGTTCTGCCGtt > 2:2381076/1‑98 (MQ=255) gAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGACAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCGCGAGGTTCTGCCGttag > 2:2089558/1‑98 (MQ=39) aaGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTg > 1:1740002/1‑100 (MQ=255) aGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGt < 1:857935/100‑1 (MQ=255) gATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGtt < 1:543282/100‑1 (MQ=255) cTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTAc < 1:3216964/100‑1 (MQ=255) gCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACtt > 2:1826332/1‑100 (MQ=255) aTCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTc < 1:2970343/100‑1 (MQ=255) aTCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTc < 2:575718/100‑1 (MQ=255) tCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCa < 1:1842891/100‑1 (MQ=255) tCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCa < 1:2310113/100‑1 (MQ=255) aTGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCTATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCagag < 2:1022631/100‑1 (MQ=255) tgtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg > 2:1318073/1‑100 (MQ=255) gtgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagga > 2:1978172/1‑100 (MQ=255) tgCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgaggag > 2:194917/1‑100 (MQ=255) tgCATAGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgagg < 2:153059/98‑1 (MQ=255) gCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAgaggag > 1:3153345/1‑99 (MQ=255) gCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAgt > 2:1250166/1‑100 (MQ=255) cATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAgtg > 2:1188736/1‑100 (MQ=255) gAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGtga > 1:38073/1‑100 (MQ=255) aaaaaaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGtgat > 2:2746010/1‑100 (MQ=255) aaTCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGaaa < 2:3684400/100‑1 (MQ=255) cTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAt > 2:249990/1‑100 (MQ=255) ttCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTTCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAtt > 2:2677272/1‑100 (MQ=255) tCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAttt < 1:3318581/100‑1 (MQ=255) cAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAtttt < 1:2529993/100‑1 (MQ=255) cAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAtttt < 1:2600977/100‑1 (MQ=255) cAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAAtttt < 2:2435147/100‑1 (MQ=255) agatagatATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTg > 1:359400/1‑100 (MQ=255) agatagatATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTg > 2:2099458/1‑100 (MQ=255) agatagatATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTg < 1:621857/100‑1 (MQ=255) agatagatATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTg < 2:716232/100‑1 (MQ=255) gatagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGa < 2:185347/100‑1 (MQ=255) atagataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGaa < 2:2194802/100‑1 (MQ=255) tagataTCATTCTCCTGAACAATCCGATGAACGGAAGAACCCCGCGGTTCTGCCGTTTTTGGTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAg > 2:2080365/1‑100 (MQ=255) gataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGtt > 1:3666622/1‑100 (MQ=255) gataTCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGATGATGAAAAATTTTGAAGtt > 1:1567236/1‑100 (MQ=255) tatCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCt > 1:1362666/1‑100 (MQ=255) tCATTCTCCTGAACTATCCGATGTACGGGAGAACCTCGCGGTTCTGACTTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGATAATTTTTCAAGTTCTGc < 2:2241340/100‑1 (MQ=255) tCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGc < 2:834778/100‑1 (MQ=255) cATTCTCCTGAGCATTCCGATGAGCGGCAGAGCCTCGCGGTTGTGCCGTTTTTGTTGTACTTGTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCa < 2:3100764/100‑1 (MQ=255) cATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCa > 1:473398/1‑100 (MQ=255) aTTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAg > 2:1371287/1‑100 (MQ=255) tctcCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGcc < 1:3248817/100‑1 (MQ=255) ccTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACt > 1:264295/1‑100 (MQ=255) cTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTa > 1:335970/1‑100 (MQ=255) gAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTAc > 2:3718054/1‑99 (MQ=255) aCAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTCTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGa < 2:2463699/100‑1 (MQ=255) aaTCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAAc < 2:1473053/100‑1 (MQ=255) aaTCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAAc < 1:1813518/100‑1 (MQ=255) aTCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACt > 2:2592831/1‑100 (MQ=255) tCCGATGAGCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTc < 1:187987/100‑1 (MQ=255) aaacaaaaaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACt > 2:1441078/8‑99 (MQ=37) ccGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTcc > 1:1529076/1‑100 (MQ=255) caaaaaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCt > 1:2771809/5‑100 (MQ=38) caaaaaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCt > 1:3259139/5‑100 (MQ=38) tGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCttt < 2:736358/100‑1 (MQ=255) aaaaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCttt < 1:1529451/98‑1 (MQ=255) gAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTAAGAGAAGTGGTGATAAAAAATTTTGAAGTTCTGCAGCCAATACAGAACTACCTTTc > 2:3415102/1‑100 (MQ=255) aaaCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTc > 1:3581863/2‑100 (MQ=255) aaCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTGCCTTTcc > 2:2048620/1‑100 (MQ=255) aaCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTcc < 1:3462617/100‑1 (MQ=255) aaCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTcc > 1:2346080/1‑100 (MQ=255) aaCGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTcc < 2:948118/100‑1 (MQ=255) aCGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCg > 2:990873/1‑100 (MQ=255) cGGCAGAACCTCGCGGTTCTGCCGTTTTTTTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGCAGTTCTGCAGCCACTACAGAACTCCCTTTCCgn < 2:2291704/100‑2 (MQ=255) cGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCgg < 2:890183/100‑1 (MQ=255) cGGCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTTTTTTTTTTTGTAGTGGTGATGAAAAATTTTGATGTTCTTCAGCCACTACAGAACTCCCTTTCCgt > 2:2710786/1‑99 (MQ=25) ggCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGt > 2:3022918/1‑100 (MQ=255) ggCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGt > 1:52050/1‑100 (MQ=255) ggCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGt < 1:808094/100‑1 (MQ=255) ncAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc > 1:3045901/2‑100 (MQ=255) gCAGACCCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTAATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCgg < 2:2111623/98‑1 (MQ=255) gCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc > 2:1861460/1‑100 (MQ=255) gCAGAACCGCGAGGTTCTGCCGTTTTTTTTTTTTTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc > 2:1515184/1‑100 (MQ=38) gCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc > 1:3404872/1‑100 (MQ=255) gCAGAACCGCGAGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTc > 1:1061813/1‑100 (MQ=255) cAGAACCTCGCTGTTCTGCCGTTGTTGTTTTACTGTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCt < 2:3301580/100‑1 (MQ=255) cAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCt > 2:2830366/1‑100 (MQ=255) cAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCt > 1:1570731/1‑100 (MQ=255) aGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGt < 2:1656908/97‑1 (MQ=255) gAACCGCGAGGTTCTGCCGTCTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTAc > 2:2330168/1‑100 (MQ=255) aCCTCGCGGTTCTGCCGTTTTTGTTTGACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCg < 2:3284153/100‑1 (MQ=255) cTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAAAAAAAAAAAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCGCt < 2:3790215/100‑1 (MQ=255) | TGGTGCTGTGAGTTCAGAAAGATTCTGCAATCTATGTGCATTGAAAAAATCTTCAGATAGATATCATTCTCCTGAACAATCCGATGAACGGCAGAACCTCGCGGTTCTGCCGTTTTTGTTTTACTTTTCAGAGGAGTGGTGATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCGCTA > NC_000913/2767569‑2767766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |