Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,980,744 A→T 15.7% intergenic (‑109/+20) ygeA ← / ← araE Asp/Glu_racemase family protein/arabinose transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,980,7440AT15.7% 393.7 / 59.3 153intergenic (‑109/+20)ygeA/araEAsp/Glu_racemase family protein/arabinose transporter
Reads supporting (aligned to +/- strand):  ref base A (69/60);  new base T (13/11);  total (82/71)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.73e-01

Only 100 of 157 total aligned reads displayed.

CTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCG  >  NC_000913/2980645‑2980843
                                                                                                   |                                                                                                   
cTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACa                                                                                                     >  1:2843303/1‑100 (MQ=255)
 tGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAg                                                                                                    >  1:1048259/1‑100 (MQ=255)
  gATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAAAGAAAAAAGGGCCGGATGTACAGc                                                                                                   <  1:1867282/100‑1 (MQ=255)
   aTGTGTGTTACCGAAACAAGGCTGAATAAGGAACGAGAAAAACGACTCAACGGCCAAGTGCCCAATAAAAAAAAAAAAAAAAAGGGCCGGATGTACa                                                                                                     <  2:592790/97‑1 (MQ=255)
      tgtgtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACAt                                                                                               >  1:1913513/1‑100 (MQ=255)
        tgtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATcc                                                                                             <  1:2838730/100‑1 (MQ=255)
         gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCg                                                                                            >  1:2365503/1‑100 (MQ=255)
         gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCg                                                                                            <  2:7558/100‑1 (MQ=255)
         gtTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCg                                                                                            >  1:1092885/1‑100 (MQ=255)
           tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCCACGGTCAAGTGCACAATCGCTATTAACGAAAAAAGGTCCGGATGTACAGcccacac                                                                                             >  2:83395/1‑94 (MQ=255)
           tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                          <  1:1497610/100‑1 (MQ=255)
           tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                          <  1:964999/100‑1 (MQ=255)
           tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                          <  2:429982/100‑1 (MQ=255)
           tACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGc                                                                                          >  2:1283690/1‑100 (MQ=255)
            acaagaacaaGACTGAATAAGGAACGAGACGACCGCCTCAACGGCCAAGTGCCCAATAAAAAAAAAAAAAAAAAGGGCCGGATGTGCTGTACATCCGGc                                                                                          <  2:3260335/94‑1 (MQ=12)
            aCCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGcc                                                                                         <  1:802264/100‑1 (MQ=39)
             ccGCAAGAAGTCTCAATAAGGAACTAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGccc                                                                                        <  1:1398805/100‑1 (MQ=37)
             ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGccc                                                                                        <  2:846077/100‑1 (MQ=39)
             ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGccc                                                                                        >  1:3514094/1‑100 (MQ=255)
             ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGccc                                                                                        >  2:2896378/1‑100 (MQ=255)
             ccGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGccc                                                                                        >  2:1137239/1‑100 (MQ=255)
              cGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCg                                                                                       >  1:3288815/1‑100 (MQ=255)
               gCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGt                                                                                      >  1:3562293/1‑100 (MQ=255)
               gCAACAAGGCAGAATAAGGAACGAGACAAACGCCGCAGCGGCCAAGTGCCCAATCAAAAAAAAAGAAAAAAGGGCCGGATGTGCTGTACATCCGGcc                                                                                         <  2:3444658/97‑1 (MQ=19)
                caacaaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTg                                                                                     <  1:2745897/100‑1 (MQ=255)
                    aaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGcccttttttc                                                                                 <  2:1527761/100‑8 (MQ=37)
                    aaGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGaaa                                                                                  <  2:1939778/99‑1 (MQ=255)
                    aaGGCTAAATAAGCAACAAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTGCTGTACATCCGGccctttttcc                                                                                 <  2:2273839/100‑8 (MQ=25)
                          gAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACg                                                                           <  1:2529722/100‑1 (MQ=255)
                           aaTAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGAACCGGATATCCAGCACATCCGGCCCGTaaaaaccg                                                                              >  2:1484444/1‑92 (MQ=255)
                              aaGGAACGAGACAAACGCCTCAACGGCCATGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGCACAGCACATCCGGCCCGTGAAATCAGACGCCGa                                                                       <  2:2296859/100‑1 (MQ=255)
                               aGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGat                                                                      >  1:380397/1‑100 (MQ=255)
                                ggAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGata                                                                     >  2:799102/1‑100 (MQ=255)
                                 gAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGatat                                                                    >  2:2305809/1‑100 (MQ=255)
                                 gAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGatat                                                                    >  1:3546132/1‑100 (MQ=255)
                                   aCGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATAttt                                                                  >  1:3320787/1‑100 (MQ=255)
                                    cGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTATATAAAAAAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtc                                                                 <  2:1092530/100‑1 (MQ=255)
                                     gagaCAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTtct                                                                <  1:3022694/100‑1 (MQ=255)
                                       gaCAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCa                                                              >  1:2249827/1‑100 (MQ=255)
                                           aaCGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACtt                                                          >  2:3751680/1‑100 (MQ=255)
                                               ccTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCg                                                      >  1:1417097/1‑100 (MQ=255)
                                               ccTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCg                                                      >  1:2915006/1‑100 (MQ=255)
                                                cacAACGGCCAAGTGCCAAATCTCTATCAACGAAAAAAGGGCCTGAAGTACAGCACAGCGCGCACGTGAAATTAGTTGCCGATATTTCTCaa                                                             <  2:3211038/90‑1 (MQ=255)
                                                 tCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGcc                                                    <  2:1794675/100‑1 (MQ=255)
                                                  cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                   >  1:1102038/1‑100 (MQ=255)
                                                  cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                   >  2:2255428/1‑100 (MQ=255)
                                                  cAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCt                                                   >  2:2775381/1‑100 (MQ=255)
                                                   aaCGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTg                                                  <  1:628015/100‑1 (MQ=255)
                                                   aaCGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTg                                                  <  1:2059574/100‑1 (MQ=255)
                                                    aCGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGc                                                 <  2:2850275/100‑1 (MQ=255)
                                                     nggCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGcc                                                >  2:3070628/2‑100 (MQ=255)
                                                     cGGCCAAGTGCCCAATCTCTATTAACGAACAAAAGGCTGGCTATAGAGTCCATCATGCCTGTGAGATCAGGCGACGATAGTTCTCAACTGCTCGCCTg                                                  <  2:1757045/98‑1 (MQ=255)
                                                        ccAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATc                                             <  1:704742/100‑1 (MQ=255)
                                                          aaGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAg                                           <  2:2601617/100‑1 (MQ=255)
                                                             tGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGttt                                        >  2:948562/1‑100 (MQ=255)
                                                               cccAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGc                                      <  2:3528603/100‑1 (MQ=255)
                                                                   ntctcTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTc                                  >  2:886153/2‑100 (MQ=255)
                                                                      tctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGat                               <  1:3211890/100‑1 (MQ=255)
                                                                       ctATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGata                              <  1:992929/100‑1 (MQ=255)
                                                                          ttAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGt                           <  1:1733518/100‑1 (MQ=255)
                                                                            aaCGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTc                         >  2:3820013/1‑100 (MQ=255)
                                                                            aaCGAAAAAAGGGCCGGATGTACAGCACATCCAGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTc                         <  2:679436/100‑1 (MQ=255)
                                                                              cGAAAAACGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGCTCGATATGTTCCa                       >  1:3428827/1‑100 (MQ=255)
                                                                              cGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCa                       >  1:1150895/1‑100 (MQ=255)
                                                                               gAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAg                      >  2:2847311/1‑100 (MQ=255)
                                                                                 aaaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGatagatcggaaga                    >  1:1043862/1‑90 (MQ=255)
                                                                                  aaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGt                   <  1:3755884/100‑1 (MQ=255)
                                                                                  aaaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGt                   >  1:522237/1‑100 (MQ=255)
                                                                                   aaaGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTg                  <  1:1524667/100‑1 (MQ=255)
                                                                                     cgggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc                >  1:1623276/2‑100 (MQ=38)
                                                                                     cgggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc                >  1:3076718/2‑100 (MQ=38)
                                                                                     aGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc                <  2:40731/100‑1 (MQ=255)
                                                                                     aGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGAc                >  2:1463717/1‑100 (MQ=255)
                                                                                      gggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa               >  1:2035417/1‑100 (MQ=39)
                                                                                      gggCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa               >  2:1346001/1‑100 (MQ=255)
                                                                                       ggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAt              >  2:1686870/1‑100 (MQ=39)
                                                                                       ggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAt              >  1:563258/1‑100 (MQ=39)
                                                                                       ggCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAt              >  1:1550367/1‑100 (MQ=39)
                                                                                       ggCCGGATGGGCTGTACATGCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACa               >  2:3129074/1‑99 (MQ=255)
                                                                                        gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt             >  1:2919537/1‑100 (MQ=255)
                                                                                        gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt             >  1:2024021/1‑100 (MQ=255)
                                                                                        gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt             >  2:1666899/1‑100 (MQ=255)
                                                                                        gCCGGATGTGCTGTACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtt             >  2:434011/1‑100 (MQ=255)
                                                                                        gCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCACAAATTCTCGCCTGCCACCCGTCTGCGTTCGATATGTTCCAGCGTGAc                >  2:2696726/1‑97 (MQ=255)
                                                                                          cGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAtttt           >  1:2696486/1‑100 (MQ=255)
                                                                                           ggATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAttttt          >  1:1349868/1‑100 (MQ=255)
                                                                                           ggATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACAttttt          >  1:3474887/1‑100 (MQ=255)
                                                                                            gATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCTACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg         <  1:2960863/100‑1 (MQ=255)
                                                                                            gATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg         <  1:1761447/100‑1 (MQ=255)
                                                                                             aTGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTgg        <  2:2903317/100‑1 (MQ=255)
                                                                                             aTGTACAACACATCCGGGCCGTGCACTCAGCCGCCGCTACTTCTGAACTGCTCGCCTGCCATCGGTTTGCATTCGATATGTTCCAGAGTGACATTTTTgg        <  2:2379870/100‑1 (MQ=255)
                                                                                               gTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGtt      >  2:1015809/1‑100 (MQ=255)
                                                                                               gTACAGCACATCCCGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTg         <  2:355322/97‑1 (MQ=255)
                                                                                                tACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTCTTTGttt     >  2:1056448/1‑100 (MQ=255)
                                                                                                 aCAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTc    >  2:3638502/1‑100 (MQ=255)
                                                                                                 aCAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTc    >  2:240778/1‑100 (MQ=255)
                                                                                                  cAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTcc   >  1:3301394/1‑100 (MQ=255)
                                                                                                  cAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTcc   >  1:121032/1‑100 (MQ=255)
                                                                                                  cAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTcc   <  2:3487544/100‑1 (MQ=255)
                                                                                                   aGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCg  <  1:3303899/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTGATGTGTGTTACCGCAACAAGGCTGAATAAGGAACGAGACAAACGCCTCAACGGCCAAGTGCCCAATCTCTATTAACGAAAAAAGGGCCGGATGTACAGCACATCCGGCCCGTGAAATCAGACGCCGATATTTCTCAACTTCTCGCCTGCCATCAGTTTGCGTTCGATATGTTCCAGCGTGACATTTTTGGTTTCCG  >  NC_000913/2980645‑2980843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: